RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 ANKRD20A3Q5VUR7 823 aa10.41□□□□□ -0.74
SMG1-208ENST00000563448 CXorf57Q6NSI4 855 aaKnown RBP10.41□□□□□ -0.74
SMG1-208ENST00000563448 CES5AQ6NT32 575 aa10.41□□□□□ -0.74
SMG1-208ENST00000563448 ZDHHC24Q6UX98 284 aa10.41□□□□□ -0.74
SMG1-208ENST00000563448 TPGS1Q6ZTW0 290 aa10.41□□□□□ -0.74
SMG1-208ENST00000563448 ATPAF2Q8N5M1 289 aa10.41□□□□□ -0.74
SMG1-208ENST00000563448 CCDC110Q8TBZ0 833 aa10.41□□□□□ -0.74
SMG1-208ENST00000563448 CCHCR1Q8TD31 782 aa10.41□□□□□ -0.74
SMG1-208ENST00000563448 ANKRD7Q92527 254 aa10.41□□□□□ -0.74
SMG1-208ENST00000563448 ARHGEF2Q92974 986 aaKnown RBP10.41□□□□□ -0.74
SMG1-208ENST00000563448 PABPC5Q96DU9 382 aaKnown RBP10.41□□□□□ -0.74
SMG1-208ENST00000563448 SNF8Q96H20 258 aa10.41□□□□□ -0.74
SMG1-208ENST00000563448 GDE1Q9NZC3 331 aa10.41□□□□□ -0.74
SMG1-208ENST00000563448 SEPT10Q9P0V9 454 aa10.41□□□□□ -0.74
SMG1-208ENST00000563448 WHRNQ9P202 907 aa10.41□□□□□ -0.74
SMG1-208ENST00000563448 NFU1Q9UMS0 254 aa10.41□□□□□ -0.74
SMG1-208ENST00000563448 TBC1D30Q9Y2I9 924 aa10.41□□□□□ -0.74
SMG1-208ENST00000563448 TICRRQ7Z2Z1 1910 aa10.4□□□□□ -0.74
SMG1-208ENST00000563448 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.4□□□□□ -0.74
SMG1-208ENST00000563448 A0A0D9SEW6 157 aa10.4□□□□□ -0.74
SMG1-208ENST00000563448 TYW5A2RUC4 315 aaKnown RBP10.4□□□□□ -0.74
SMG1-208ENST00000563448 ARHGAP42A6NI28 874 aa10.4□□□□□ -0.74
SMG1-208ENST00000563448 KCNK1O00180 336 aa10.4□□□□□ -0.74
SMG1-208ENST00000563448 RNF103O00237 685 aa10.4□□□□□ -0.74
SMG1-208ENST00000563448 DNALI1O14645 258 aaPredicted RBP10.4□□□□□ -0.74
SMG1-208ENST00000563448 RAMP2O60895 175 aa10.4□□□□□ -0.74
SMG1-208ENST00000563448 SEC31AO94979 1220 aaKnown RBP10.4□□□□□ -0.74
SMG1-208ENST00000563448 LUC7L3O95232 432 aaKnown RBP10.4□□□□□ -0.74
SMG1-208ENST00000563448 FCARP24071 287 aa10.4□□□□□ -0.74
SMG1-208ENST00000563448 PTPN3P26045 913 aa10.4□□□□□ -0.74
SMG1-208ENST00000563448 HOXD9P28356 352 aaPredicted RBP10.4□□□□□ -0.74
SMG1-208ENST00000563448 ACVRL1P37023 503 aa10.4□□□□□ -0.74
SMG1-208ENST00000563448 CLCN6P51797 869 aa10.4□□□□□ -0.74
SMG1-208ENST00000563448 GNA12Q03113 381 aa10.4□□□□□ -0.74
SMG1-208ENST00000563448 ZBTB17Q13105 803 aa10.4□□□□□ -0.74
SMG1-208ENST00000563448 ZNF177Q13360 481 aaPredicted RBP10.4□□□□□ -0.74
SMG1-208ENST00000563448 BRD3Q15059 726 aa10.4□□□□□ -0.74
SMG1-208ENST00000563448 PARP15Q460N3 678 aa10.4□□□□□ -0.74
SMG1-208ENST00000563448 FSCBQ5H9T9 825 aa10.4□□□□□ -0.74
SMG1-208ENST00000563448 PRPF38BQ5VTL8 546 aaKnown RBP10.4□□□□□ -0.74
SMG1-208ENST00000563448 IZUMO3Q5VZ72 239 aa10.4□□□□□ -0.74
SMG1-208ENST00000563448 RNF43Q68DV7 783 aa10.4□□□□□ -0.74
SMG1-208ENST00000563448 FBXO38Q6PIJ6 1188 aa10.4□□□□□ -0.74
SMG1-208ENST00000563448 SETD3Q86TU7 594 aaPredicted RBP10.4□□□□□ -0.74
SMG1-208ENST00000563448 CARNMT1Q8N4J0 409 aa10.4□□□□□ -0.74
SMG1-208ENST00000563448 TAB3Q8N5C8 712 aaPredicted RBP10.4□□□□□ -0.74
SMG1-208ENST00000563448 WFDC5Q8TCV5 224 aa10.4□□□□□ -0.74
SMG1-208ENST00000563448 DDI1Q8WTU0 396 aa10.4□□□□□ -0.74
SMG1-208ENST00000563448 SMARCD2Q92925 531 aa10.4□□□□□ -0.74
SMG1-208ENST00000563448 ART4Q93070 314 aa10.4□□□□□ -0.74
SMG1-208ENST00000563448 MYADMQ96S97 322 aa10.4□□□□□ -0.74
SMG1-208ENST00000563448 GAS2L1Q99501 681 aaPredicted RBP10.4□□□□□ -0.74
SMG1-208ENST00000563448 CEP41Q9BYV8 373 aa10.4□□□□□ -0.74
SMG1-208ENST00000563448 TRPV4Q9HBA0 871 aa10.4□□□□□ -0.74
SMG1-208ENST00000563448 ZDHHC18Q9NUE0 388 aa10.4□□□□□ -0.74
SMG1-208ENST00000563448 PLK2Q9NYY3 685 aa10.4□□□□□ -0.74
SMG1-208ENST00000563448 PAK5Q9P286 719 aa10.4□□□□□ -0.74
SMG1-208ENST00000563448 TBC1D14Q9P2M4 693 aa10.4□□□□□ -0.74
SMG1-208ENST00000563448 IPO11Q9UI26 975 aaKnown RBP10.4□□□□□ -0.74
SMG1-208ENST00000563448 CDH7Q9ULB5 785 aa10.4□□□□□ -0.74
SMG1-208ENST00000563448 WNT6Q9Y6F9 365 aa10.4□□□□□ -0.74
SMG1-208ENST00000563448 A0A0A0MRY4 1105 aa10.4□□□□□ -0.75
SMG1-208ENST00000563448 ILVBLA1L0T0 632 aa10.4□□□□□ -0.75
SMG1-208ENST00000563448 CCDC151A5D8V7 595 aa10.4□□□□□ -0.75
SMG1-208ENST00000563448 H0Y626 953 aa10.4□□□□□ -0.75
SMG1-208ENST00000563448 J3KR12 359 aa10.4□□□□□ -0.75
SMG1-208ENST00000563448 RHOCP08134 193 aa10.4□□□□□ -0.75
SMG1-208ENST00000563448 ITIH2P19823 946 aa10.4□□□□□ -0.75
SMG1-208ENST00000563448 NUMBP49757 651 aa10.4□□□□□ -0.75
SMG1-208ENST00000563448 ITGA8P53708 1063 aa10.4□□□□□ -0.75
SMG1-208ENST00000563448 SERINC3Q13530 473 aa10.4□□□□□ -0.75
SMG1-208ENST00000563448 C6orf118Q5T5N4 469 aa10.4□□□□□ -0.75
SMG1-208ENST00000563448 FYB2Q5VWT5 728 aa10.4□□□□□ -0.75
SMG1-208ENST00000563448 HIBCHQ6NVY1 386 aaPredicted RBP10.4□□□□□ -0.75
SMG1-208ENST00000563448 TMEM25Q86YD3 366 aa10.4□□□□□ -0.75
SMG1-208ENST00000563448 LRRC49Q8IUZ0 686 aa10.4□□□□□ -0.75
SMG1-208ENST00000563448 ADGRG2Q8IZP9 1017 aa10.4□□□□□ -0.75
SMG1-208ENST00000563448 ZNF567Q8N184 647 aa10.4□□□□□ -0.75
SMG1-208ENST00000563448 EIF1ADQ8N9N8 165 aaKnown RBP10.4□□□□□ -0.75
SMG1-208ENST00000563448 ST13P5Q8NFI4 369 aaPredicted RBP10.4□□□□□ -0.75
SMG1-208ENST00000563448 OR7D4Q8NG98 312 aa10.4□□□□□ -0.75
SMG1-208ENST00000563448 BHMTQ93088 406 aa10.4□□□□□ -0.75
SMG1-208ENST00000563448 LRRC45Q96CN5 670 aa10.4□□□□□ -0.75
SMG1-208ENST00000563448 RIPOR3Q96MK2 946 aa10.4□□□□□ -0.75
SMG1-208ENST00000563448 SPATA13Q96N96 652 aa10.4□□□□□ -0.75
SMG1-208ENST00000563448 MAGEH1Q9H213 219 aa10.4□□□□□ -0.75
SMG1-208ENST00000563448 POMKQ9H5K3 350 aa10.4□□□□□ -0.75
SMG1-208ENST00000563448 TPX2Q9ULW0 747 aaKnown RBP10.4□□□□□ -0.75
SMG1-208ENST00000563448 CLEC4EQ9ULY5 219 aa10.4□□□□□ -0.75
SMG1-208ENST00000563448 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.39□□□□□ -0.75
SMG1-208ENST00000563448 HEPACAM2A8MVW5 462 aa10.39□□□□□ -0.75
SMG1-208ENST00000563448 MATN3O15232 486 aa10.39□□□□□ -0.75
SMG1-208ENST00000563448 ZNF189O75820 626 aaPredicted RBP10.39□□□□□ -0.75
SMG1-208ENST00000563448 METTL18O95568 372 aa10.39□□□□□ -0.75
SMG1-208ENST00000563448 PEX11BO96011 259 aa10.39□□□□□ -0.75
SMG1-208ENST00000563448 FAM153BP0C7A2 387 aa10.39□□□□□ -0.75
SMG1-208ENST00000563448 ACTN2P35609 894 aa10.39□□□□□ -0.75
SMG1-208ENST00000563448 MTHFRP42898 656 aa10.39□□□□□ -0.75
SMG1-208ENST00000563448 PLTPP55058 493 aa10.39□□□□□ -0.75
SMG1-208ENST00000563448 HLTFQ14527 1009 aaKnown RBP eCLIP10.39□□□□□ -0.752e-7■■■□□ 16.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms