RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 TBC1D3CQ6IPX1 549 aa17.31■□□□□ 0.36
HDGFL3-203ENST00000563404 FBXL22Q6P050 247 aa17.31■□□□□ 0.36
HDGFL3-203ENST00000563404 KANSL1Q7Z3B3 1105 aa17.31■□□□□ 0.36
HDGFL3-203ENST00000563404 TBC1D3Q8IZP1 549 aaPredicted RBP17.31■□□□□ 0.36
HDGFL3-203ENST00000563404 DEFB106AQ8N104 65 aa17.31■□□□□ 0.36
HDGFL3-203ENST00000563404 EID2Q8N6I1 236 aa17.31■□□□□ 0.36
HDGFL3-203ENST00000563404 ATP6V0D2Q8N8Y2 350 aa17.31■□□□□ 0.36
HDGFL3-203ENST00000563404 SKA1Q96BD8 255 aa17.31■□□□□ 0.36
HDGFL3-203ENST00000563404 LRIG1Q96JA1 1093 aa17.31■□□□□ 0.36
HDGFL3-203ENST00000563404 CPXM1Q96SM3 734 aa17.31■□□□□ 0.36
HDGFL3-203ENST00000563404 CRACR2AQ9BSW2 395 aa17.31■□□□□ 0.36
HDGFL3-203ENST00000563404 GDF3Q9NR23 364 aa17.31■□□□□ 0.36
HDGFL3-203ENST00000563404 COX16Q9P0S2 106 aa17.31■□□□□ 0.36
HDGFL3-203ENST00000563404 ACADVLP49748 655 aa17.3■□□□□ 0.36
HDGFL3-203ENST00000563404 PAK1Q13153 545 aa17.3■□□□□ 0.36
HDGFL3-203ENST00000563404 TMPRSS12Q86WS5 348 aa17.3■□□□□ 0.36
HDGFL3-203ENST00000563404 TSC1Q92574 1164 aa17.3■□□□□ 0.36
HDGFL3-203ENST00000563404 SPAG5Q96R06 1193 aa17.3■□□□□ 0.36
HDGFL3-203ENST00000563404 FAM204AQ9H8W3 233 aa17.3■□□□□ 0.36
HDGFL3-203ENST00000563404 DDIT4Q9NX09 232 aa17.3■□□□□ 0.36
HDGFL3-203ENST00000563404 PCDHGA1Q9Y5H4 931 aa17.3■□□□□ 0.36
HDGFL3-203ENST00000563404 OR51B4Q9Y5P0 310 aa17.3■□□□□ 0.36
HDGFL3-203ENST00000563404 BPTFQ12830 3046 aa17.29■□□□□ 0.36
HDGFL3-203ENST00000563404 A0A087WV48 116 aa17.29■□□□□ 0.36
HDGFL3-203ENST00000563404 A0A1B0GVM2 712 aa17.29■□□□□ 0.36
HDGFL3-203ENST00000563404 TCAF2A6NFQ2 919 aa17.29■□□□□ 0.36
HDGFL3-203ENST00000563404 GADD45BO75293 160 aaPredicted RBP17.29■□□□□ 0.36
HDGFL3-203ENST00000563404 GRAP2O75791 330 aa17.29■□□□□ 0.36
HDGFL3-203ENST00000563404 SLC9A1P19634 815 aa17.29■□□□□ 0.36
HDGFL3-203ENST00000563404 MAT2AP31153 395 aaKnown RBP17.29■□□□□ 0.36
HDGFL3-203ENST00000563404 GGCXP38435 758 aa17.29■□□□□ 0.36
HDGFL3-203ENST00000563404 RXRGP48443 463 aa17.29■□□□□ 0.36
HDGFL3-203ENST00000563404 VASPP50552 380 aaPredicted RBP17.29■□□□□ 0.36
HDGFL3-203ENST00000563404 SULT2A1Q06520 285 aa17.29■□□□□ 0.36
HDGFL3-203ENST00000563404 AUHQ13825 339 aaKnown RBP17.29■□□□□ 0.36
HDGFL3-203ENST00000563404 ARHGAP44Q17R89 818 aa17.29■□□□□ 0.36
HDGFL3-203ENST00000563404 POM121L1PQ3SYA9 428 aa17.29■□□□□ 0.36
HDGFL3-203ENST00000563404 TTC39BQ5VTQ0 682 aaPredicted RBP17.29■□□□□ 0.36
HDGFL3-203ENST00000563404 SFMBT2Q5VUG0 894 aa17.29■□□□□ 0.36
HDGFL3-203ENST00000563404 NAPEPLDQ6IQ20 393 aa17.29■□□□□ 0.36
HDGFL3-203ENST00000563404 TRIM65Q6PJ69 517 aa17.29■□□□□ 0.36
HDGFL3-203ENST00000563404 C14orf80Q86SX3 495 aa17.29■□□□□ 0.36
HDGFL3-203ENST00000563404 PASD1Q8IV76 773 aa17.29■□□□□ 0.36
HDGFL3-203ENST00000563404 SLC12A6Q9UHW9 1150 aa17.29■□□□□ 0.36
HDGFL3-203ENST00000563404 HS3ST4Q9Y661 456 aa17.29■□□□□ 0.36
HDGFL3-203ENST00000563404 PLRG1O43660 514 aaKnown RBP17.28■□□□□ 0.36
HDGFL3-203ENST00000563404 ATP9BO43861 1147 aa17.28■□□□□ 0.36
HDGFL3-203ENST00000563404 RFPL3O75679 317 aa17.28■□□□□ 0.36
HDGFL3-203ENST00000563404 CCR1P32246 355 aa17.28■□□□□ 0.36
HDGFL3-203ENST00000563404 NNMTP40261 264 aa17.28■□□□□ 0.36
HDGFL3-203ENST00000563404 CDK17Q00537 523 aa17.28■□□□□ 0.36
HDGFL3-203ENST00000563404 CNTN1Q12860 1018 aa17.28■□□□□ 0.36
HDGFL3-203ENST00000563404 RABGAP1LQ5R372 815 aa17.28■□□□□ 0.36
HDGFL3-203ENST00000563404 AGBL4Q5VU57 503 aa17.28■□□□□ 0.36
HDGFL3-203ENST00000563404 OTUD1Q5VV17 481 aaPredicted RBP17.28■□□□□ 0.36
HDGFL3-203ENST00000563404 FAM183BPQ6ZVS7 135 aa17.28■□□□□ 0.36
HDGFL3-203ENST00000563404 ENOSF1Q7L5Y1 443 aa17.28■□□□□ 0.36
HDGFL3-203ENST00000563404 MFSD2AQ8NA29 543 aa17.28■□□□□ 0.36
HDGFL3-203ENST00000563404 PPP1R13BQ96KQ4 1090 aa17.28■□□□□ 0.36
HDGFL3-203ENST00000563404 RPRD1AQ96P16 312 aaPredicted RBP17.28■□□□□ 0.36
HDGFL3-203ENST00000563404 FEM1AQ9BSK4 669 aa17.28■□□□□ 0.36
HDGFL3-203ENST00000563404 ERVMER34-1Q9H9K5 563 aa17.28■□□□□ 0.36
HDGFL3-203ENST00000563404 ASNSD1Q9NWL6 643 aa17.28■□□□□ 0.36
HDGFL3-203ENST00000563404 AJAP1Q9UKB5 411 aaPredicted RBP17.28■□□□□ 0.36
HDGFL3-203ENST00000563404 VANGL2Q9ULK5 521 aa17.28■□□□□ 0.36
HDGFL3-203ENST00000563404 PPM1HQ9ULR3 514 aa17.28■□□□□ 0.36
HDGFL3-203ENST00000563404 TPX2Q9ULW0 747 aaKnown RBP17.28■□□□□ 0.36
HDGFL3-203ENST00000563404 CA5BQ9Y2D0 317 aa17.28■□□□□ 0.36
HDGFL3-203ENST00000563404 KNTC1P50748 2209 aa17.27■□□□□ 0.36
HDGFL3-203ENST00000563404 E9PAM4 449 aa17.27■□□□□ 0.36
HDGFL3-203ENST00000563404 YKT6O15498 198 aa17.27■□□□□ 0.36
HDGFL3-203ENST00000563404 SLC7A4O43246 635 aa17.27■□□□□ 0.36
HDGFL3-203ENST00000563404 ERBB2P04626 1255 aa17.27■□□□□ 0.36
HDGFL3-203ENST00000563404 GLI1P08151 1106 aa17.27■□□□□ 0.36
HDGFL3-203ENST00000563404 C1SP09871 688 aa17.27■□□□□ 0.36
HDGFL3-203ENST00000563404 SLC2A3P11169 496 aa17.27■□□□□ 0.36
HDGFL3-203ENST00000563404 USP8P40818 1118 aa17.27■□□□□ 0.36
HDGFL3-203ENST00000563404 ARRB1P49407 418 aaPredicted RBP17.27■□□□□ 0.36
HDGFL3-203ENST00000563404 TAS2R38P59533 333 aa17.27■□□□□ 0.36
HDGFL3-203ENST00000563404 DLG2Q15700 870 aa17.27■□□□□ 0.36
HDGFL3-203ENST00000563404 ACCSLQ4AC99 568 aa17.27■□□□□ 0.36
HDGFL3-203ENST00000563404 FBXL19Q6PCT2 694 aa17.27■□□□□ 0.36
HDGFL3-203ENST00000563404 OLFML1Q6UWY5 402 aa17.27■□□□□ 0.36
HDGFL3-203ENST00000563404 Q6ZVU0 165 aa17.27■□□□□ 0.36
HDGFL3-203ENST00000563404 PRPF39Q86UA1 669 aaKnown RBP17.27■□□□□ 0.36
HDGFL3-203ENST00000563404 OR8D1Q8WZ84 308 aa17.27■□□□□ 0.36
HDGFL3-203ENST00000563404 SHC3Q92529 594 aa17.27■□□□□ 0.36
HDGFL3-203ENST00000563404 RNF34Q969K3 372 aa17.27■□□□□ 0.36
HDGFL3-203ENST00000563404 KDM4CQ9H3R0 1056 aa17.27■□□□□ 0.36
HDGFL3-203ENST00000563404 CAAP1Q9H8G2 361 aa17.27■□□□□ 0.36
HDGFL3-203ENST00000563404 ANLNQ9NQW6 1124 aa17.27■□□□□ 0.36
HDGFL3-203ENST00000563404 PCDHGC3Q9UN70 934 aa17.27■□□□□ 0.36
HDGFL3-203ENST00000563404 DOCK9Q9BZ29 2069 aa17.27■□□□□ 0.35
HDGFL3-203ENST00000563404 ARID1BQ8NFD5 2236 aaPredicted RBP17.27■□□□□ 0.35
HDGFL3-203ENST00000563404 I6L893 689 aaPredicted RBP17.26■□□□□ 0.35
HDGFL3-203ENST00000563404 RNF103O00237 685 aa17.26■□□□□ 0.35
HDGFL3-203ENST00000563404 MCF2LO15068 1137 aa17.26■□□□□ 0.35
HDGFL3-203ENST00000563404 TLX3O43711 291 aaPredicted RBP17.26■□□□□ 0.35
HDGFL3-203ENST00000563404 HSF2BPO75031 334 aa17.26■□□□□ 0.35
HDGFL3-203ENST00000563404 PAGE1O75459 146 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms