RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 C8orf48Q96LL4 319 aa7.71□□□□□ -1.18
TCF4-216ENST00000562680 CEP295NLQ96MC4 621 aa7.71□□□□□ -1.18
TCF4-216ENST00000562680 EGFL8Q99944 293 aa7.71□□□□□ -1.18
TCF4-216ENST00000562680 ETNK2Q9NVF9 386 aa7.71□□□□□ -1.18
TCF4-216ENST00000562680 MRPS23Q9Y3D9 190 aaKnown RBP7.71□□□□□ -1.18
TCF4-216ENST00000562680 PAPSS1O43252 624 aaPredicted RBP7.71□□□□□ -1.18
TCF4-216ENST00000562680 RIPK2O43353 540 aa7.71□□□□□ -1.18
TCF4-216ENST00000562680 VPS26AO75436 327 aa7.71□□□□□ -1.18
TCF4-216ENST00000562680 TPPPO94811 219 aa7.71□□□□□ -1.18
TCF4-216ENST00000562680 CALCAP01258 141 aa7.71□□□□□ -1.18
TCF4-216ENST00000562680 AKT1P31749 480 aa7.71□□□□□ -1.18
TCF4-216ENST00000562680 DUSP4Q13115 394 aa7.71□□□□□ -1.18
TCF4-216ENST00000562680 TBCCQ15814 346 aa7.71□□□□□ -1.18
TCF4-216ENST00000562680 PARP15Q460N3 678 aa7.71□□□□□ -1.18
TCF4-216ENST00000562680 ANKRD20A2Q5SQ80 823 aa7.71□□□□□ -1.18
TCF4-216ENST00000562680 ANKRD20A1Q5TYW2 823 aa7.71□□□□□ -1.18
TCF4-216ENST00000562680 CCNYL1Q8N7R7 359 aa7.71□□□□□ -1.18
TCF4-216ENST00000562680 CELF6Q96J87 481 aaKnown RBP7.71□□□□□ -1.18
TCF4-216ENST00000562680 PLEKHG4BQ96PX9 1271 aa7.71□□□□□ -1.18
TCF4-216ENST00000562680 PRDM12Q9H4Q4 367 aa7.71□□□□□ -1.18
TCF4-216ENST00000562680 SMPD4Q9NXE4 827 aa7.71□□□□□ -1.18
TCF4-216ENST00000562680 TMEM120BA0PK00 339 aa7.7□□□□□ -1.18
TCF4-216ENST00000562680 MGEA5O60502 916 aa7.7□□□□□ -1.18
TCF4-216ENST00000562680 DNAJC6O75061 913 aa7.7□□□□□ -1.18
TCF4-216ENST00000562680 ESRRAP11474 423 aaPredicted RBP7.7□□□□□ -1.18
TCF4-216ENST00000562680 MLNP12872 115 aa7.7□□□□□ -1.18
TCF4-216ENST00000562680 HOXD8P13378 290 aaPredicted RBP7.7□□□□□ -1.18
TCF4-216ENST00000562680 PTPN7P35236 360 aa7.7□□□□□ -1.18
TCF4-216ENST00000562680 MARCKSL1P49006 195 aa7.7□□□□□ -1.18
TCF4-216ENST00000562680 TUBA4AP68366 448 aa7.7□□□□□ -1.18
TCF4-216ENST00000562680 SMAD3P84022 425 aaKnown RBP7.7□□□□□ -1.18
TCF4-216ENST00000562680 STX3Q13277 289 aa7.7□□□□□ -1.18
TCF4-216ENST00000562680 MTFR1Q15390 333 aa7.7□□□□□ -1.18
TCF4-216ENST00000562680 TRIP4Q15650 581 aaPredicted RBP7.7□□□□□ -1.18
TCF4-216ENST00000562680 ZNF284Q2VY69 593 aa7.7□□□□□ -1.18
TCF4-216ENST00000562680 C11orf91Q3C1V1 193 aa7.7□□□□□ -1.18
TCF4-216ENST00000562680 BLOC1S5Q8TDH9 187 aa7.7□□□□□ -1.18
TCF4-216ENST00000562680 PLD4Q96BZ4 506 aa7.7□□□□□ -1.18
TCF4-216ENST00000562680 PAFAH2Q99487 392 aa7.7□□□□□ -1.18
TCF4-216ENST00000562680 EPN3Q9H201 632 aa7.7□□□□□ -1.18
TCF4-216ENST00000562680 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.7□□□□□ -1.18
TCF4-216ENST00000562680 CNTN6Q9UQ52 1028 aa7.7□□□□□ -1.18
TCF4-216ENST00000562680 A0A1W2PQ67 120 aa7.7□□□□□ -1.18
TCF4-216ENST00000562680 MYBPHLA2RUH7 354 aa7.7□□□□□ -1.18
TCF4-216ENST00000562680 SKAP2O75563 359 aaPredicted RBP7.7□□□□□ -1.18
TCF4-216ENST00000562680 BAIAP3O94812 1187 aa7.7□□□□□ -1.18
TCF4-216ENST00000562680 MYL2P10916 166 aa7.7□□□□□ -1.18
TCF4-216ENST00000562680 MAPKAPK2P49137 400 aa7.7□□□□□ -1.18
TCF4-216ENST00000562680 SULT2A1Q06520 285 aa7.7□□□□□ -1.18
TCF4-216ENST00000562680 TSTA3Q13630 321 aaPredicted RBP7.7□□□□□ -1.18
TCF4-216ENST00000562680 ZNF572Q7Z3I7 529 aaPredicted RBP7.7□□□□□ -1.18
TCF4-216ENST00000562680 TFAP2DQ7Z6R9 452 aa7.7□□□□□ -1.18
TCF4-216ENST00000562680 MRPL10Q7Z7H8 261 aaKnown RBP7.7□□□□□ -1.18
TCF4-216ENST00000562680 FCRL2Q96LA5 508 aaPredicted RBP7.7□□□□□ -1.18
TCF4-216ENST00000562680 SARS2Q9NP81 518 aaKnown RBP7.7□□□□□ -1.18
TCF4-216ENST00000562680 CLIC5Q9NZA1 410 aa7.7□□□□□ -1.18
TCF4-216ENST00000562680 KAT6AQ92794 2004 aa7.7□□□□□ -1.18
TCF4-216ENST00000562680 NRXN2Q9P2S2 1712 aa7.7□□□□□ -1.18
TCF4-216ENST00000562680 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.7□□□□□ -1.18
TCF4-216ENST00000562680 BCLAF3A2AJT9 711 aaKnown RBP7.7□□□□□ -1.18
TCF4-216ENST00000562680 NRP1O14786 923 aa7.7□□□□□ -1.18
TCF4-216ENST00000562680 TM9SF1O15321 606 aa7.7□□□□□ -1.18
TCF4-216ENST00000562680 ZNF132P52740 706 aa7.7□□□□□ -1.18
TCF4-216ENST00000562680 MRPS35P82673 323 aaKnown RBP7.7□□□□□ -1.18
TCF4-216ENST00000562680 STARD3Q14849 445 aa7.7□□□□□ -1.18
TCF4-216ENST00000562680 DDR2Q16832 855 aa7.7□□□□□ -1.18
TCF4-216ENST00000562680 TBC1D19Q8N5T2 526 aa7.7□□□□□ -1.18
TCF4-216ENST00000562680 FAR2Q96K12 515 aa7.7□□□□□ -1.18
TCF4-216ENST00000562680 CSPG4P5Q96PW8 444 aa7.7□□□□□ -1.18
TCF4-216ENST00000562680 TBL1YQ9BQ87 522 aa7.7□□□□□ -1.18
TCF4-216ENST00000562680 XYLT2Q9H1B5 865 aa7.7□□□□□ -1.18
TCF4-216ENST00000562680 RSPH9Q9H1X1 276 aaPredicted RBP7.7□□□□□ -1.18
TCF4-216ENST00000562680 GTSE1Q9NYZ3 720 aa7.7□□□□□ -1.18
TCF4-216ENST00000562680 EPS15L1Q9UBC2 864 aa7.7□□□□□ -1.18
TCF4-216ENST00000562680 GJD2Q9UKL4 321 aa7.7□□□□□ -1.18
TCF4-216ENST00000562680 MAFFQ9ULX9 164 aa7.7□□□□□ -1.18
TCF4-216ENST00000562680 COG5Q9UP83 839 aa7.7□□□□□ -1.18
TCF4-216ENST00000562680 ARL2BPQ9Y2Y0 163 aa7.7□□□□□ -1.18
TCF4-216ENST00000562680 HAUS5O94927 633 aa7.7□□□□□ -1.18
TCF4-216ENST00000562680 RBP1P09455 135 aa7.7□□□□□ -1.18
TCF4-216ENST00000562680 FGFR1P11362 822 aa7.7□□□□□ -1.18
TCF4-216ENST00000562680 CYP2A6P11509 494 aaPredicted RBP7.7□□□□□ -1.18
TCF4-216ENST00000562680 CHN1P15882 459 aa7.7□□□□□ -1.18
TCF4-216ENST00000562680 MAP4P27816 1152 aaKnown RBP7.7□□□□□ -1.18
TCF4-216ENST00000562680 CDKN2BP42772 138 aa7.7□□□□□ -1.18
TCF4-216ENST00000562680 AARSP49588 968 aaKnown RBP eCLIP7.7□□□□□ -1.18
TCF4-216ENST00000562680 GRM3Q14832 879 aa7.7□□□□□ -1.18
TCF4-216ENST00000562680 SYTL3Q4VX76 610 aa7.7□□□□□ -1.18
TCF4-216ENST00000562680 GRTP1Q5TC63 336 aa7.7□□□□□ -1.18
TCF4-216ENST00000562680 RAP1GAP2Q684P5 730 aa7.7□□□□□ -1.18
TCF4-216ENST00000562680 CWF19L1Q69YN2 538 aaKnown RBP7.7□□□□□ -1.18
TCF4-216ENST00000562680 FAM47EQ6ZV65 393 aa7.7□□□□□ -1.18
TCF4-216ENST00000562680 ATAD1Q8NBU5 361 aa7.7□□□□□ -1.18
TCF4-216ENST00000562680 EXT2Q93063 718 aa7.7□□□□□ -1.18
TCF4-216ENST00000562680 SAMD11Q96NU1 681 aa7.7□□□□□ -1.18
TCF4-216ENST00000562680 GPR88Q9GZN0 384 aa7.7□□□□□ -1.18
TCF4-216ENST00000562680 RNF39Q9H2S5 420 aa7.7□□□□□ -1.18
TCF4-216ENST00000562680 PCMTD2Q9NV79 361 aa7.7□□□□□ -1.18
TCF4-216ENST00000562680 PPARGC1AQ9UBK2 798 aaKnown RBP7.7□□□□□ -1.18
TCF4-216ENST00000562680 TRMT6Q9UJA5 497 aaKnown RBP7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms