RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 ARTNQ5T4W7 220 aa10.55□□□□□ -0.72
USP3-219ENST00000561326 STXBP5Q5T5C0 1151 aa10.55□□□□□ -0.72
USP3-219ENST00000561326 HIBCHQ6NVY1 386 aaPredicted RBP10.55□□□□□ -0.72
USP3-219ENST00000561326 ANKRD54Q6NXT1 300 aa10.55□□□□□ -0.72
USP3-219ENST00000561326 ZNF783Q6ZMS7 281 aa10.55□□□□□ -0.72
USP3-219ENST00000561326 B4GALNT4Q76KP1 1039 aa10.55□□□□□ -0.72
USP3-219ENST00000561326 ARID3BQ8IVW6 561 aaPredicted RBP10.55□□□□□ -0.72
USP3-219ENST00000561326 ARHGAP12Q8IWW6 846 aa10.55□□□□□ -0.72
USP3-219ENST00000561326 FAM217AQ8IXS0 508 aa10.55□□□□□ -0.72
USP3-219ENST00000561326 CCDC33Q8N5R6 958 aa10.55□□□□□ -0.72
USP3-219ENST00000561326 CELF5Q8N6W0 485 aaKnown RBP10.55□□□□□ -0.72
USP3-219ENST00000561326 TDRD5Q8NAT2 981 aaKnown RBP10.55□□□□□ -0.72
USP3-219ENST00000561326 GLIS1Q8NBF1 620 aa10.55□□□□□ -0.72
USP3-219ENST00000561326 CCDC110Q8TBZ0 833 aa10.55□□□□□ -0.72
USP3-219ENST00000561326 FBXO25Q8TCJ0 367 aa10.55□□□□□ -0.72
USP3-219ENST00000561326 DDI1Q8WTU0 396 aa10.55□□□□□ -0.72
USP3-219ENST00000561326 FATE1Q969F0 183 aa10.55□□□□□ -0.72
USP3-219ENST00000561326 SPATA13Q96N96 652 aa10.55□□□□□ -0.72
USP3-219ENST00000561326 ACBD3Q9H3P7 528 aa10.55□□□□□ -0.72
USP3-219ENST00000561326 RAB6BQ9NRW1 208 aa10.55□□□□□ -0.72
USP3-219ENST00000561326 ZDHHC18Q9NUE0 388 aa10.55□□□□□ -0.72
USP3-219ENST00000561326 GOLGA6AQ9NYA3 693 aa10.55□□□□□ -0.72
USP3-219ENST00000561326 GDE1Q9NZC3 331 aa10.55□□□□□ -0.72
USP3-219ENST00000561326 IPO11Q9UI26 975 aaKnown RBP10.55□□□□□ -0.72
USP3-219ENST00000561326 SHOC2Q9UQ13 582 aa10.55□□□□□ -0.72
USP3-219ENST00000561326 DOCK8Q8NF50 2099 aa10.54□□□□□ -0.72
USP3-219ENST00000561326 KCNK1O00180 336 aa10.54□□□□□ -0.72
USP3-219ENST00000561326 TRDMT1O14717 391 aaKnown RBP10.54□□□□□ -0.72
USP3-219ENST00000561326 CHADO15335 359 aa10.54□□□□□ -0.72
USP3-219ENST00000561326 GREM1O60565 184 aa10.54□□□□□ -0.72
USP3-219ENST00000561326 MAFKO60675 156 aa10.54□□□□□ -0.72
USP3-219ENST00000561326 JCHAINP01591 159 aa10.54□□□□□ -0.72
USP3-219ENST00000561326 RHOCP08134 193 aa10.54□□□□□ -0.72
USP3-219ENST00000561326 MYBL2P10244 700 aa10.54□□□□□ -0.72
USP3-219ENST00000561326 CEBPBP17676 345 aa10.54□□□□□ -0.72
USP3-219ENST00000561326 LMAN1P49257 510 aa10.54□□□□□ -0.72
USP3-219ENST00000561326 RPS24P62847 133 aaKnown RBP10.54□□□□□ -0.72
USP3-219ENST00000561326 ZXDBP98169 803 aa10.54□□□□□ -0.72
USP3-219ENST00000561326 RBM10P98175 930 aaKnown RBP10.54□□□□□ -0.72
USP3-219ENST00000561326 CDK16Q00536 496 aa10.54□□□□□ -0.72
USP3-219ENST00000561326 GNA12Q03113 381 aa10.54□□□□□ -0.72
USP3-219ENST00000561326 DHX9Q08211 1270 aaKnown RBP10.54□□□□□ -0.72
USP3-219ENST00000561326 IL10RBQ08334 325 aa10.54□□□□□ -0.72
USP3-219ENST00000561326 SERINC3Q13530 473 aa10.54□□□□□ -0.72
USP3-219ENST00000561326 HNRNPDQ14103 355 aaKnown RBP10.54□□□□□ -0.72
USP3-219ENST00000561326 PRPSAP1Q14558 356 aa10.54□□□□□ -0.72
USP3-219ENST00000561326 CBX2Q14781 532 aaPredicted RBP10.54□□□□□ -0.72
USP3-219ENST00000561326 TMCO4Q5TGY1 634 aa10.54□□□□□ -0.72
USP3-219ENST00000561326 ZDHHC24Q6UX98 284 aa10.54□□□□□ -0.72
USP3-219ENST00000561326 PRUNE1Q86TP1 453 aa10.54□□□□□ -0.72
USP3-219ENST00000561326 BBS5Q8N3I7 341 aa10.54□□□□□ -0.72
USP3-219ENST00000561326 ZNF557Q8N988 423 aaPredicted RBP10.54□□□□□ -0.72
USP3-219ENST00000561326 ING5Q8WYH8 240 aa10.54□□□□□ -0.72
USP3-219ENST00000561326 USP13Q92995 863 aaPredicted RBP10.54□□□□□ -0.72
USP3-219ENST00000561326 WBP2Q969T9 261 aa10.54□□□□□ -0.72
USP3-219ENST00000561326 EXOC4Q96A65 974 aa10.54□□□□□ -0.72
USP3-219ENST00000561326 ADAM7Q9H2U9 754 aa10.54□□□□□ -0.72
USP3-219ENST00000561326 SP110Q9HB58 689 aa10.54□□□□□ -0.72
USP3-219ENST00000561326 NDFIP2Q9NV92 336 aa10.54□□□□□ -0.72
USP3-219ENST00000561326 KLHL8Q9P2G9 620 aaPredicted RBP10.54□□□□□ -0.72
USP3-219ENST00000561326 TBC1D30Q9Y2I9 924 aa10.54□□□□□ -0.72
USP3-219ENST00000561326 FAM153BP0C7A2 387 aa10.53□□□□□ -0.72
USP3-219ENST00000561326 VAV1P15498 845 aa10.53□□□□□ -0.72
USP3-219ENST00000561326 POU3F3P20264 500 aaPredicted RBP10.53□□□□□ -0.72
USP3-219ENST00000561326 PTPN3P26045 913 aa10.53□□□□□ -0.72
USP3-219ENST00000561326 IRAK1P51617 712 aa10.53□□□□□ -0.72
USP3-219ENST00000561326 IFI35P80217 286 aaPredicted RBP10.53□□□□□ -0.72
USP3-219ENST00000561326 WASHC5Q12768 1159 aa10.53□□□□□ -0.72
USP3-219ENST00000561326 CDH18Q13634 790 aa10.53□□□□□ -0.72
USP3-219ENST00000561326 FAM153CQ494X1 144 aa10.53□□□□□ -0.72
USP3-219ENST00000561326 SPDYCQ5MJ68 293 aa10.53□□□□□ -0.72
USP3-219ENST00000561326 CFAP58Q5T655 872 aa10.53□□□□□ -0.72
USP3-219ENST00000561326 RNASEH2BQ5TBB1 312 aaKnown RBP10.53□□□□□ -0.72
USP3-219ENST00000561326 MARC1Q5VT66 337 aa10.53□□□□□ -0.72
USP3-219ENST00000561326 RNF219Q5W0B1 726 aaPredicted RBP10.53□□□□□ -0.72
USP3-219ENST00000561326 IL31Q6EBC2 164 aa10.53□□□□□ -0.72
USP3-219ENST00000561326 MTERF4Q7Z6M4 381 aaKnown RBP10.53□□□□□ -0.72
USP3-219ENST00000561326 CCDC25Q86WR0 208 aa10.53□□□□□ -0.72
USP3-219ENST00000561326 CIR1Q86X95 450 aaPredicted RBP10.53□□□□□ -0.72
USP3-219ENST00000561326 BBS7Q8IWZ6 715 aa10.53□□□□□ -0.72
USP3-219ENST00000561326 TP53INP2Q8IXH6 220 aa10.53□□□□□ -0.72
USP3-219ENST00000561326 GSPT2Q8IYD1 628 aaKnown RBP10.53□□□□□ -0.72
USP3-219ENST00000561326 PDIK1LQ8N165 341 aa10.53□□□□□ -0.72
USP3-219ENST00000561326 ZNF567Q8N184 647 aa10.53□□□□□ -0.72
USP3-219ENST00000561326 CARNMT1Q8N4J0 409 aa10.53□□□□□ -0.72
USP3-219ENST00000561326 MREGQ8N565 214 aa10.53□□□□□ -0.72
USP3-219ENST00000561326 ZCCHC9Q8N567 271 aaKnown RBP10.53□□□□□ -0.72
USP3-219ENST00000561326 NETO2Q8NC67 525 aa10.53□□□□□ -0.72
USP3-219ENST00000561326 ITFG1Q8TB96 612 aa10.53□□□□□ -0.72
USP3-219ENST00000561326 ZSCAN18Q8TBC5 510 aaPredicted RBP10.53□□□□□ -0.72
USP3-219ENST00000561326 LRRN4Q8WUT4 740 aa10.53□□□□□ -0.72
USP3-219ENST00000561326 ARHGEF2Q92974 986 aaKnown RBP10.53□□□□□ -0.72
USP3-219ENST00000561326 E2F7Q96AV8 911 aa10.53□□□□□ -0.72
USP3-219ENST00000561326 HMCESQ96FZ2 354 aa10.53□□□□□ -0.72
USP3-219ENST00000561326 TEKT5Q96M29 485 aa10.53□□□□□ -0.72
USP3-219ENST00000561326 RIPOR3Q96MK2 946 aa10.53□□□□□ -0.72
USP3-219ENST00000561326 ZSWIM3Q96MP5 696 aa10.53□□□□□ -0.72
USP3-219ENST00000561326 ZNF599Q96NL3 588 aa10.53□□□□□ -0.72
USP3-219ENST00000561326 SPON2Q9BUD6 331 aa10.53□□□□□ -0.72
USP3-219ENST00000561326 SMG9Q9H0W8 520 aaKnown RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms