RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 OPN1MW3P0DN78 364 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 ARP10275 920 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 CYP2C8P10632 490 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 PDHBP11177 359 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 CYP4B1P13584 511 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 PNLIPP16233 465 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 KRT4P19013 534 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 EEF1B2P24534 225 aaKnown RBP2.12□□□□□ -2.07
RTF1-207ENST00000561076 CCNCP24863 283 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 MGAT1P26572 445 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 NOS3P29474 1203 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 NTSR1P30989 418 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 CXCR5P32302 372 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 CSF2RBP32927 897 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 CASRP41180 1078 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 SKIV2L2P42285 1042 aaKnown RBP2.12□□□□□ -2.07
RTF1-207ENST00000561076 GCLCP48506 637 aaPredicted RBP2.12□□□□□ -2.07
RTF1-207ENST00000561076 CENPAP49450 140 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 VPS41P49754 854 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 GZMKP49863 264 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 CAMPP49913 170 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 DGKEP52429 567 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 OAZ1P54368 228 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 GALCP54803 685 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 SLC12A3P55017 1021 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 CLRN1P58418 232 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 SLC26A5P58743 744 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 BPIFB4P59827 614 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 YPEL5P62699 121 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 YWHAZP63104 245 aaKnown RBP2.12□□□□□ -2.07
RTF1-207ENST00000561076 PRR5P85299 388 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 ZP2Q05996 745 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 GFPT1Q06210 699 aaPredicted RBP2.12□□□□□ -2.07
RTF1-207ENST00000561076 SLFN5Q08AF3 891 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 ACSM2AQ08AH3 577 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 CETN1Q12798 172 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 CSTF3Q12996 717 aaKnown RBP2.12□□□□□ -2.07
RTF1-207ENST00000561076 SNX1Q13596 522 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 RUNX2Q13950 521 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 BAATQ14032 418 aaPredicted RBP2.12□□□□□ -2.07
RTF1-207ENST00000561076 IRF3Q14653 427 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 UBXN2BQ14CS0 331 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 PCLAFQ15004 111 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 LAPTM4AQ15012 233 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 PDK1Q15118 436 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 STILQ15468 1287 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 MAPK11Q15759 364 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 ST3GAL2Q16842 350 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 UGP2Q16851 508 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 TPD52L1Q16890 204 aaPredicted RBP2.12□□□□□ -2.07
RTF1-207ENST00000561076 PRICKLE4Q2TBC4 344 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 WSCD2Q2TBF2 565 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 MYLK3Q32MK0 819 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 SUPT20HL1Q3ZLR7 823 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 LRRC23Q53EV4 343 aaPredicted RBP2.12□□□□□ -2.07
RTF1-207ENST00000561076 HSP90B2PQ58FF3 399 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 MPP7Q5T2T1 576 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 ARHGAP40Q5TG30 622 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 KANK2Q63ZY3 851 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 ATG9BQ674R7 924 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 ACSM2BQ68CK6 577 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 SFRP4Q6FHJ7 346 aaPredicted RBP2.12□□□□□ -2.07
RTF1-207ENST00000561076 CCDC144NLQ6NUI1 221 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 EFCAB12Q6NXP0 572 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 IRGCQ6NXR0 463 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 TAPT1Q6NXT6 567 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 TRMT10BQ6PF06 316 aaKnown RBP2.12□□□□□ -2.07
RTF1-207ENST00000561076 TRAT1Q6PIZ9 186 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 FOXR2Q6PJQ5 311 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 ZC3H14Q6PJT7 736 aaKnown RBP2.12□□□□□ -2.07
RTF1-207ENST00000561076 ANGPTL8Q6UXH0 198 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 LIPIQ6XZB0 460 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 PPP1R21Q6ZMI0 780 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 PRR23CQ6ZRP0 262 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 LINC00696Q6ZRV3 163 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 C1orf229Q6ZS94 237 aaPredicted RBP2.12□□□□□ -2.07
RTF1-207ENST00000561076 C11orf57Q6ZUT1 292 aaPredicted RBP2.12□□□□□ -2.07
RTF1-207ENST00000561076 ILDR2Q71H61 639 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 OTUD6AQ7L8S5 288 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 CAMKMTQ7Z624 323 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 ZER1Q7Z7L7 766 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 TADA2BQ86TJ2 420 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 KBTBD6Q86V97 674 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 SP8Q8IXZ3 490 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 CCDC13Q8IYE1 715 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 MINDY1Q8N5J2 469 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 C11orf44Q8N8P7 122 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 RTL3Q8N8U3 475 aaKnown RBP2.12□□□□□ -2.07
RTF1-207ENST00000561076 DTX3Q8N9I9 347 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 AGBL5Q8NDL9 886 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 PDZD8Q8NEN9 1154 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 LPCAT1Q8NF37 534 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 ZFP28Q8NHY6 868 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 FIBINQ8TAL6 211 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 URGCPQ8TCY9 931 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 BRSK1Q8TDC3 778 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 DUSP19Q8WTR2 217 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 TMEM171Q8WVE6 324 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 TEKT4Q8WW24 435 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 ZNF606Q8WXB4 792 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms