RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 CLDN11O75508 207 aa12.86□□□□□ -0.35
SMAD3-208ENST00000558827 IGLV3-19P01714 112 aa12.86□□□□□ -0.35
SMAD3-208ENST00000558827 UNGP13051 313 aaPredicted RBP12.86□□□□□ -0.35
SMAD3-208ENST00000558827 SPINK2P20155 84 aa12.86□□□□□ -0.35
SMAD3-208ENST00000558827 RDXP35241 583 aaKnown RBP12.86□□□□□ -0.35
SMAD3-208ENST00000558827 RFC1P35251 1148 aaPredicted RBP12.86□□□□□ -0.35
SMAD3-208ENST00000558827 NNMTP40261 264 aa12.86□□□□□ -0.35
SMAD3-208ENST00000558827 NSFP46459 744 aaKnown RBP12.86□□□□□ -0.35
SMAD3-208ENST00000558827 ZNF165P49910 485 aa12.86□□□□□ -0.35
SMAD3-208ENST00000558827 CDH4P55283 916 aa12.86□□□□□ -0.35
SMAD3-208ENST00000558827 BNC1Q01954 994 aa12.86□□□□□ -0.35
SMAD3-208ENST00000558827 PTP4A2Q12974 167 aa12.86□□□□□ -0.35
SMAD3-208ENST00000558827 GRIK2Q13002 908 aa12.86□□□□□ -0.35
SMAD3-208ENST00000558827 TTC39BQ5VTQ0 682 aaPredicted RBP12.86□□□□□ -0.35
SMAD3-208ENST00000558827 LRRC31Q6UY01 552 aa12.86□□□□□ -0.35
SMAD3-208ENST00000558827 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.86□□□□□ -0.35
SMAD3-208ENST00000558827 Q6ZVU0 165 aa12.86□□□□□ -0.35
SMAD3-208ENST00000558827 DRC7Q8IY82 874 aa12.86□□□□□ -0.35
SMAD3-208ENST00000558827 ZNF683Q8IZ20 524 aa12.86□□□□□ -0.35
SMAD3-208ENST00000558827 AADATQ8N5Z0 425 aa12.86□□□□□ -0.35
SMAD3-208ENST00000558827 CADM4Q8NFZ8 388 aa12.86□□□□□ -0.35
SMAD3-208ENST00000558827 DNASE2BQ8WZ79 361 aa12.86□□□□□ -0.35
SMAD3-208ENST00000558827 BIRC7Q96CA5 298 aa12.86□□□□□ -0.35
SMAD3-208ENST00000558827 CNTNAP3BQ96NU0 1288 aa12.86□□□□□ -0.35
SMAD3-208ENST00000558827 PSMB7Q99436 277 aa12.86□□□□□ -0.35
SMAD3-208ENST00000558827 SELENOOQ9BVL4 669 aa12.86□□□□□ -0.35
SMAD3-208ENST00000558827 CNTNAP3Q9BZ76 1288 aa12.86□□□□□ -0.35
SMAD3-208ENST00000558827 RTN4Q9NQC3 1192 aaKnown RBP12.86□□□□□ -0.35
SMAD3-208ENST00000558827 TAS2R14Q9NYV8 317 aa12.86□□□□□ -0.35
SMAD3-208ENST00000558827 SLC25A13Q9UJS0 675 aa12.86□□□□□ -0.35
SMAD3-208ENST00000558827 OR51B4Q9Y5P0 310 aa12.86□□□□□ -0.35
SMAD3-208ENST00000558827 ACACBO00763 2458 aa12.86□□□□□ -0.35
SMAD3-208ENST00000558827 DOCK9Q9BZ29 2069 aa12.85□□□□□ -0.35
SMAD3-208ENST00000558827 PCDH15Q96QU1 1955 aa12.85□□□□□ -0.35
SMAD3-208ENST00000558827 TARSL2A2RTX5 802 aaKnown RBP12.85□□□□□ -0.35
SMAD3-208ENST00000558827 SMTNL1A8MU46 457 aa12.85□□□□□ -0.35
SMAD3-208ENST00000558827 FAM72CH0Y354 149 aa12.85□□□□□ -0.35
SMAD3-208ENST00000558827 SMAD6O43541 496 aaKnown RBP12.85□□□□□ -0.35
SMAD3-208ENST00000558827 SYPP08247 313 aa12.85□□□□□ -0.35
SMAD3-208ENST00000558827 KRT3P12035 628 aa12.85□□□□□ -0.35
SMAD3-208ENST00000558827 TNFAIP3P21580 790 aa12.85□□□□□ -0.35
SMAD3-208ENST00000558827 RRM1P23921 792 aa12.85□□□□□ -0.35
SMAD3-208ENST00000558827 OR1E1P30953 314 aa12.85□□□□□ -0.35
SMAD3-208ENST00000558827 SDC4P31431 198 aa12.85□□□□□ -0.35
SMAD3-208ENST00000558827 SCNN1AP37088 669 aa12.85□□□□□ -0.35
SMAD3-208ENST00000558827 DPP6P42658 865 aa12.85□□□□□ -0.35
SMAD3-208ENST00000558827 PLK1P53350 603 aa12.85□□□□□ -0.35
SMAD3-208ENST00000558827 GALCP54803 685 aa12.85□□□□□ -0.35
SMAD3-208ENST00000558827 FAM193AP78312 1265 aa12.85□□□□□ -0.35
SMAD3-208ENST00000558827 ZNF252P-AS1Q0IIN9 211 aa12.85□□□□□ -0.35
SMAD3-208ENST00000558827 FOXC1Q12948 553 aa12.85□□□□□ -0.35
SMAD3-208ENST00000558827 SLC12A1Q13621 1099 aa12.85□□□□□ -0.35
SMAD3-208ENST00000558827 PRAMEF14Q5SWL7 426 aa12.85□□□□□ -0.35
SMAD3-208ENST00000558827 ARTNQ5T4W7 220 aa12.85□□□□□ -0.35
SMAD3-208ENST00000558827 FAM72AQ5TYM5 149 aa12.85□□□□□ -0.35
SMAD3-208ENST00000558827 FAM72DQ6L9T8 149 aa12.85□□□□□ -0.35
SMAD3-208ENST00000558827 RWDD4Q6NW29 188 aaKnown RBP12.85□□□□□ -0.35
SMAD3-208ENST00000558827 SCYL2Q6P3W7 929 aa12.85□□□□□ -0.35
SMAD3-208ENST00000558827 NCEH1Q6PIU2 408 aa12.85□□□□□ -0.35
SMAD3-208ENST00000558827 WDR59Q6PJI9 974 aa12.85□□□□□ -0.35
SMAD3-208ENST00000558827 LRSAM1Q6UWE0 723 aa12.85□□□□□ -0.35
SMAD3-208ENST00000558827 TRIM72Q6ZMU5 477 aa12.85□□□□□ -0.35
SMAD3-208ENST00000558827 LEKR1Q6ZMV7 388 aa12.85□□□□□ -0.35
SMAD3-208ENST00000558827 FAM72BQ86X60 149 aa12.85□□□□□ -0.35
SMAD3-208ENST00000558827 CCDC185Q8N715 623 aa12.85□□□□□ -0.35
SMAD3-208ENST00000558827 ATP11CQ8NB49 1132 aa12.85□□□□□ -0.35
SMAD3-208ENST00000558827 OR14C36Q8NHC7 312 aa12.85□□□□□ -0.35
SMAD3-208ENST00000558827 FRS2Q8WU20 508 aa12.85□□□□□ -0.35
SMAD3-208ENST00000558827 PGAP3Q96FM1 320 aaPredicted RBP12.85□□□□□ -0.35
SMAD3-208ENST00000558827 TNKS2Q9H2K2 1166 aa12.85□□□□□ -0.35
SMAD3-208ENST00000558827 SUSD2Q9UGT4 822 aa12.85□□□□□ -0.35
SMAD3-208ENST00000558827 SARDHQ9UL12 918 aa12.85□□□□□ -0.35
SMAD3-208ENST00000558827 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.85□□□□□ -0.35
SMAD3-208ENST00000558827 C2CD4BA6NLJ0 364 aa12.84□□□□□ -0.35
SMAD3-208ENST00000558827 DRGXA6NNA5 263 aa12.84□□□□□ -0.35
SMAD3-208ENST00000558827 RNF103O00237 685 aa12.84□□□□□ -0.35
SMAD3-208ENST00000558827 ATMINO43313 823 aaPredicted RBP12.84□□□□□ -0.35
SMAD3-208ENST00000558827 SH3BP5O60239 455 aa12.84□□□□□ -0.35
SMAD3-208ENST00000558827 SKILP12757 684 aa12.84□□□□□ -0.35
SMAD3-208ENST00000558827 ADRA1BP35368 520 aa12.84□□□□□ -0.35
SMAD3-208ENST00000558827 HOXD12P35452 270 aa12.84□□□□□ -0.35
SMAD3-208ENST00000558827 ACVRL1P37023 503 aa12.84□□□□□ -0.35
SMAD3-208ENST00000558827 DNA2P51530 1060 aa12.84□□□□□ -0.35
SMAD3-208ENST00000558827 ZBTB16Q05516 673 aa12.84□□□□□ -0.35
SMAD3-208ENST00000558827 SULT2A1Q06520 285 aa12.84□□□□□ -0.35
SMAD3-208ENST00000558827 IQCB1Q15051 598 aa12.84□□□□□ -0.35
SMAD3-208ENST00000558827 C5orf22Q49AR2 442 aa12.84□□□□□ -0.35
SMAD3-208ENST00000558827 KCNT1Q5JUK3 1230 aa12.84□□□□□ -0.35
SMAD3-208ENST00000558827 KIAA0895LQ68EN5 471 aa12.84□□□□□ -0.35
SMAD3-208ENST00000558827 IRF2BP2Q7Z5L9 587 aa12.84□□□□□ -0.35
SMAD3-208ENST00000558827 LUZP1Q86V48 1076 aa12.84□□□□□ -0.35
SMAD3-208ENST00000558827 PYROXD2Q8N2H3 581 aa12.84□□□□□ -0.35
SMAD3-208ENST00000558827 NETO2Q8NC67 525 aa12.84□□□□□ -0.35
SMAD3-208ENST00000558827 CHST14Q8NCH0 376 aa12.84□□□□□ -0.35
SMAD3-208ENST00000558827 FAM172AQ8WUF8 416 aa12.84□□□□□ -0.35
SMAD3-208ENST00000558827 BAP1Q92560 729 aa12.84□□□□□ -0.35
SMAD3-208ENST00000558827 FUCA2Q9BTY2 467 aa12.84□□□□□ -0.35
SMAD3-208ENST00000558827 GAREM1Q9H706 876 aa12.84□□□□□ -0.35
SMAD3-208ENST00000558827 FBRSQ9HAH7 460 aa12.84□□□□□ -0.35
SMAD3-208ENST00000558827 EBF2Q9HAK2 575 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms