RNA–Protein interactions for RNA: ENST00000558285.5

USP3-208, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best) BASIC

Gene USP3, Length 1,742 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-208ENST00000558285 ITIH6Q6UXX5 1313 aa8.9□□□□□ -0.98
USP3-208ENST00000558285 KIAA1549LQ6ZVL6 1849 aa8.9□□□□□ -0.98
USP3-208ENST00000558285 ZSCAN5CA6NGD5 496 aaPredicted RBP8.9□□□□□ -0.98
USP3-208ENST00000558285 LRRC72A6NJI9 287 aa8.9□□□□□ -0.98
USP3-208ENST00000558285 C2CD4BA6NLJ0 364 aa8.9□□□□□ -0.98
USP3-208ENST00000558285 E9PAM4 449 aa8.9□□□□□ -0.98
USP3-208ENST00000558285 TRIM24O15164 1050 aa8.9□□□□□ -0.98
USP3-208ENST00000558285 EPHB6O15197 1021 aa8.9□□□□□ -0.98
USP3-208ENST00000558285 ALOX15BO15296 676 aa8.9□□□□□ -0.98
USP3-208ENST00000558285 ENDOD1O94919 500 aa8.9□□□□□ -0.98
USP3-208ENST00000558285 TNNT1P13805 278 aa8.9□□□□□ -0.98
USP3-208ENST00000558285 CHRNB2P17787 502 aa8.9□□□□□ -0.98
USP3-208ENST00000558285 CD70P32970 193 aa8.9□□□□□ -0.98
USP3-208ENST00000558285 NUDT1P36639 197 aa8.9□□□□□ -0.98
USP3-208ENST00000558285 FLT3P36888 993 aa8.9□□□□□ -0.98
USP3-208ENST00000558285 LIMK1P53667 647 aa8.9□□□□□ -0.98
USP3-208ENST00000558285 NRG1Q02297 640 aaPredicted RBP8.9□□□□□ -0.98
USP3-208ENST00000558285 GFPT1Q06210 699 aaPredicted RBP8.9□□□□□ -0.98
USP3-208ENST00000558285 SRSF5Q13243 272 aaKnown RBP8.9□□□□□ -0.98
USP3-208ENST00000558285 EIF4EBP2Q13542 120 aaPredicted RBP8.9□□□□□ -0.98
USP3-208ENST00000558285 ACAP1Q15027 740 aa8.9□□□□□ -0.98
USP3-208ENST00000558285 TEAD4Q15561 434 aa8.9□□□□□ -0.98
USP3-208ENST00000558285 CDO1Q16878 200 aa8.9□□□□□ -0.98
USP3-208ENST00000558285 DUOXA1Q1HG43 343 aa8.9□□□□□ -0.98
USP3-208ENST00000558285 MAP7D1Q3KQU3 841 aa8.9□□□□□ -0.98
USP3-208ENST00000558285 C5orf22Q49AR2 442 aa8.9□□□□□ -0.98
USP3-208ENST00000558285 ACCSLQ4AC99 568 aa8.9□□□□□ -0.98
USP3-208ENST00000558285 SLC45A4Q5BKX6 768 aa8.9□□□□□ -0.98
USP3-208ENST00000558285 SLFN11Q7Z7L1 901 aa8.9□□□□□ -0.98
USP3-208ENST00000558285 DRC7Q8IY82 874 aa8.9□□□□□ -0.98
USP3-208ENST00000558285 DCAF4L2Q8NA75 395 aa8.9□□□□□ -0.98
USP3-208ENST00000558285 FAM172AQ8WUF8 416 aa8.9□□□□□ -0.98
USP3-208ENST00000558285 PIGKQ92643 395 aa8.9□□□□□ -0.98
USP3-208ENST00000558285 PPP1R16AQ96I34 528 aa8.9□□□□□ -0.98
USP3-208ENST00000558285 CFAP57Q96MR6 1250 aa8.9□□□□□ -0.98
USP3-208ENST00000558285 ACOX2Q99424 681 aa8.9□□□□□ -0.98
USP3-208ENST00000558285 PRMT1Q99873 361 aaKnown RBP8.9□□□□□ -0.98
USP3-208ENST00000558285 OMDQ99983 421 aa8.9□□□□□ -0.98
USP3-208ENST00000558285 ZDHHC5Q9C0B5 715 aa8.9□□□□□ -0.98
USP3-208ENST00000558285 BTBD1Q9H0C5 482 aa8.9□□□□□ -0.98
USP3-208ENST00000558285 OSBPL2Q9H1P3 480 aa8.9□□□□□ -0.98
USP3-208ENST00000558285 HSD3B7Q9H2F3 369 aa8.9□□□□□ -0.98
USP3-208ENST00000558285 TMEM245Q9H330 911 aa8.9□□□□□ -0.98
USP3-208ENST00000558285 KCNF1Q9H3M0 494 aa8.9□□□□□ -0.98
USP3-208ENST00000558285 HAUS4Q9H6D7 363 aa8.9□□□□□ -0.98
USP3-208ENST00000558285 LUC7LQ9NQ29 371 aaKnown RBP8.9□□□□□ -0.98
USP3-208ENST00000558285 ITM2CQ9NQX7 267 aa8.9□□□□□ -0.98
USP3-208ENST00000558285 HAUS2Q9NVX0 235 aa8.9□□□□□ -0.98
USP3-208ENST00000558285 C2orf42Q9NWW7 574 aa8.9□□□□□ -0.98
USP3-208ENST00000558285 PSD3Q9NYI0 1048 aa8.9□□□□□ -0.98
USP3-208ENST00000558285 RSPH14Q9UHP6 348 aa8.9□□□□□ -0.98
USP3-208ENST00000558285 EVLQ9UI08 416 aaPredicted RBP8.9□□□□□ -0.98
USP3-208ENST00000558285 TBC1D30Q9Y2I9 924 aa8.9□□□□□ -0.98
USP3-208ENST00000558285 RAD54BQ9Y620 910 aa8.9□□□□□ -0.98
USP3-208ENST00000558285 PTPRZ1P23471 2315 aaPredicted RBP8.9□□□□□ -0.99
USP3-208ENST00000558285 FANCMQ8IYD8 2048 aa8.89□□□□□ -0.99
USP3-208ENST00000558285 ZFHX2Q9C0A1 2572 aaPredicted RBP8.89□□□□□ -0.99
USP3-208ENST00000558285 ILVBLA1L0T0 632 aa8.89□□□□□ -0.99
USP3-208ENST00000558285 FGF10O15520 208 aaPredicted RBP8.89□□□□□ -0.99
USP3-208ENST00000558285 TEX33O43247 280 aa8.89□□□□□ -0.99
USP3-208ENST00000558285 PRPSAP2O60256 369 aa8.89□□□□□ -0.99
USP3-208ENST00000558285 SRGAP2O75044 1071 aa8.89□□□□□ -0.99
USP3-208ENST00000558285 HOXB1P14653 301 aaPredicted RBP8.89□□□□□ -0.99
USP3-208ENST00000558285 C5AR1P21730 350 aa8.89□□□□□ -0.99
USP3-208ENST00000558285 ADRA1BP35368 520 aa8.89□□□□□ -0.99
USP3-208ENST00000558285 ZNF33AQ06730 810 aa8.89□□□□□ -0.99
USP3-208ENST00000558285 SPECC1LQ69YQ0 1117 aa8.89□□□□□ -0.99
USP3-208ENST00000558285 RWDD4Q6NW29 188 aaKnown RBP8.89□□□□□ -0.99
USP3-208ENST00000558285 SCYL2Q6P3W7 929 aa8.89□□□□□ -0.99
USP3-208ENST00000558285 IL27RAQ6UWB1 636 aa8.89□□□□□ -0.99
USP3-208ENST00000558285 MON1BQ7L1V2 547 aa8.89□□□□□ -0.99
USP3-208ENST00000558285 FAM131BQ86XD5 332 aa8.89□□□□□ -0.99
USP3-208ENST00000558285 MCOLN2Q8IZK6 566 aa8.89□□□□□ -0.99
USP3-208ENST00000558285 CYB5D2Q8WUJ1 264 aa8.89□□□□□ -0.99
USP3-208ENST00000558285 TBC1D31Q96DN5 1066 aa8.89□□□□□ -0.99
USP3-208ENST00000558285 MCEEQ96PE7 176 aa8.89□□□□□ -0.99
USP3-208ENST00000558285 IFNKQ9P0W0 207 aa8.89□□□□□ -0.99
USP3-208ENST00000558285 USP36Q9P275 1121 aaKnown RBP8.89□□□□□ -0.99
USP3-208ENST00000558285 OR12D3Q9UGF7 316 aa8.89□□□□□ -0.99
USP3-208ENST00000558285 FZD4Q9ULV1 537 aa8.89□□□□□ -0.99
USP3-208ENST00000558285 PYCARDQ9ULZ3 195 aa8.89□□□□□ -0.99
USP3-208ENST00000558285 CAPN11Q9UMQ6 739 aa8.89□□□□□ -0.99
USP3-208ENST00000558285 FAM186AA6NE01 2351 aa8.89□□□□□ -0.99
USP3-208ENST00000558285 IGHV1OR15-9A0A0B4J2B8 117 aa8.88□□□□□ -0.99
USP3-208ENST00000558285 DRGXA6NNA5 263 aa8.88□□□□□ -0.99
USP3-208ENST00000558285 SLC7A4O43246 635 aa8.88□□□□□ -0.99
USP3-208ENST00000558285 DAPK3O43293 454 aa8.88□□□□□ -0.99
USP3-208ENST00000558285 IGLV3-19P01714 112 aa8.88□□□□□ -0.99
USP3-208ENST00000558285 FTLP02792 175 aaPredicted RBP8.88□□□□□ -0.99
USP3-208ENST00000558285 CFIP05156 583 aa8.88□□□□□ -0.99
USP3-208ENST00000558285 RHOQP17081 205 aa8.88□□□□□ -0.99
USP3-208ENST00000558285 PRKCHP24723 683 aa8.88□□□□□ -0.99
USP3-208ENST00000558285 PSMA2P25787 234 aa8.88□□□□□ -0.99
USP3-208ENST00000558285 L1CAMP32004 1257 aa8.88□□□□□ -0.99
USP3-208ENST00000558285 TPMTP51580 245 aa8.88□□□□□ -0.99
USP3-208ENST00000558285 RAD51Q06609 339 aa8.88□□□□□ -0.99
USP3-208ENST00000558285 MESP2Q0VG99 397 aa8.88□□□□□ -0.99
USP3-208ENST00000558285 SCAPQ12770 1279 aa8.88□□□□□ -0.99
USP3-208ENST00000558285 HNRNPDQ14103 355 aaKnown RBP8.88□□□□□ -0.99
USP3-208ENST00000558285 POLD3Q15054 466 aaPredicted RBP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms