RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 PNLIPRP1P54315 467 aa3.71□□□□□ -1.82
SPG11-206ENST00000558093 P2RX3P56373 397 aa3.71□□□□□ -1.82
SPG11-206ENST00000558093 RHAGQ02094 409 aa3.71□□□□□ -1.82
SPG11-206ENST00000558093 RAPGEF1Q13905 1077 aa3.71□□□□□ -1.82
SPG11-206ENST00000558093 PRKG1Q13976 671 aa3.71□□□□□ -1.82
SPG11-206ENST00000558093 C5orf22Q49AR2 442 aa3.71□□□□□ -1.82
SPG11-206ENST00000558093 RUNDC3AQ59EK9 446 aa3.71□□□□□ -1.82
SPG11-206ENST00000558093 PARM1Q6UWI2 310 aa3.71□□□□□ -1.82
SPG11-206ENST00000558093 ZNF517Q6ZMY9 492 aaPredicted RBP3.71□□□□□ -1.82
SPG11-206ENST00000558093 SYT13Q7L8C5 426 aa3.71□□□□□ -1.82
SPG11-206ENST00000558093 ZDHHC17Q8IUH5 632 aa3.71□□□□□ -1.82
SPG11-206ENST00000558093 TMEM217Q8N7C4 229 aa3.71□□□□□ -1.82
SPG11-206ENST00000558093 EXD3Q8N9H8 876 aa3.71□□□□□ -1.82
SPG11-206ENST00000558093 FSIP1Q8NA03 581 aa3.71□□□□□ -1.82
SPG11-206ENST00000558093 FAM110DQ8TAY7 271 aaPredicted RBP3.71□□□□□ -1.82
SPG11-206ENST00000558093 ASB5Q8WWX0 329 aa3.71□□□□□ -1.82
SPG11-206ENST00000558093 SF3B5Q9BWJ5 86 aaKnown RBP3.71□□□□□ -1.82
SPG11-206ENST00000558093 ZNF304Q9HCX3 659 aa3.71□□□□□ -1.82
SPG11-206ENST00000558093 PNRC2Q9NPJ4 139 aaKnown RBP3.71□□□□□ -1.82
SPG11-206ENST00000558093 TBC1D14Q9P2M4 693 aa3.71□□□□□ -1.82
SPG11-206ENST00000558093 IGKV2D-30A0A075B6S6 120 aa3.7□□□□□ -1.82
SPG11-206ENST00000558093 GAGE12JA6NER3 117 aa3.7□□□□□ -1.82
SPG11-206ENST00000558093 LACTBL1A8MY62 500 aa3.7□□□□□ -1.82
SPG11-206ENST00000558093 E7EVH7 732 aa3.7□□□□□ -1.82
SPG11-206ENST00000558093 TNFRSF13BO14836 293 aaPredicted RBP3.7□□□□□ -1.82
SPG11-206ENST00000558093 SEPT4O43236 478 aa3.7□□□□□ -1.82
SPG11-206ENST00000558093 KCNAB3O43448 404 aa3.7□□□□□ -1.82
SPG11-206ENST00000558093 IFNA2P01563 188 aa3.7□□□□□ -1.82
SPG11-206ENST00000558093 HLA-DQA2P01906 255 aa3.7□□□□□ -1.82
SPG11-206ENST00000558093 KLKB1P03952 638 aa3.7□□□□□ -1.82
SPG11-206ENST00000558093 TYK2P29597 1187 aa3.7□□□□□ -1.82
SPG11-206ENST00000558093 SLC16A2P36021 539 aa3.7□□□□□ -1.82
SPG11-206ENST00000558093 PGGT1BP53609 377 aa3.7□□□□□ -1.82
SPG11-206ENST00000558093 PRKAA2P54646 552 aa3.7□□□□□ -1.82
SPG11-206ENST00000558093 TMPRSS3P57727 454 aa3.7□□□□□ -1.82
SPG11-206ENST00000558093 FOXO1Q12778 655 aa3.7□□□□□ -1.82
SPG11-206ENST00000558093 BIRC2Q13490 618 aa3.7□□□□□ -1.82
SPG11-206ENST00000558093 ODF3L2Q3SX64 289 aa3.7□□□□□ -1.82
SPG11-206ENST00000558093 C10orf62Q5T681 223 aaPredicted RBP3.7□□□□□ -1.82
SPG11-206ENST00000558093 TTLL5Q6EMB2 1281 aa3.7□□□□□ -1.82
SPG11-206ENST00000558093 TANGO2Q6ICL3 276 aa3.7□□□□□ -1.82
SPG11-206ENST00000558093 AAGABQ6PD74 315 aa3.7□□□□□ -1.82
SPG11-206ENST00000558093 RNF144BQ7Z419 303 aa3.7□□□□□ -1.82
SPG11-206ENST00000558093 CAMK1DQ8IU85 385 aa3.7□□□□□ -1.82
SPG11-206ENST00000558093 LRRC57Q8N9N7 239 aa3.7□□□□□ -1.82
SPG11-206ENST00000558093 CMASQ8NFW8 434 aaPredicted RBP3.7□□□□□ -1.82
SPG11-206ENST00000558093 STT3BQ8TCJ2 826 aa3.7□□□□□ -1.82
SPG11-206ENST00000558093 OTUD7AQ8TE49 926 aaPredicted RBP3.7□□□□□ -1.82
SPG11-206ENST00000558093 THOC3Q96J01 351 aaKnown RBP3.7□□□□□ -1.82
SPG11-206ENST00000558093 NPAS1Q99742 590 aa3.7□□□□□ -1.82
SPG11-206ENST00000558093 ACAD9Q9H845 621 aa3.7□□□□□ -1.82
SPG11-206ENST00000558093 SAYSD1Q9NPB0 183 aa3.7□□□□□ -1.82
SPG11-206ENST00000558093 KRCC1Q9NPI7 259 aaPredicted RBP3.7□□□□□ -1.82
SPG11-206ENST00000558093 RNF146Q9NTX7 359 aa3.7□□□□□ -1.82
SPG11-206ENST00000558093 NCKIPSDQ9NZQ3 722 aa3.7□□□□□ -1.82
SPG11-206ENST00000558093 RCE1Q9Y256 329 aa3.7□□□□□ -1.82
SPG11-206ENST00000558093 RAP2CQ9Y3L5 183 aa3.7□□□□□ -1.82
SPG11-206ENST00000558093 COMMD10Q9Y6G5 202 aa3.7□□□□□ -1.82
SPG11-206ENST00000558093 TMEM247A6NEH6 219 aa3.69□□□□□ -1.82
SPG11-206ENST00000558093 NPIPB13A6NJU9 1138 aa3.69□□□□□ -1.82
SPG11-206ENST00000558093 SAC3D1A6NKF1 404 aa3.69□□□□□ -1.82
SPG11-206ENST00000558093 NPIPB5A8MRT5 1133 aa3.69□□□□□ -1.82
SPG11-206ENST00000558093 NPIPB4C9JG80 1138 aa3.69□□□□□ -1.82
SPG11-206ENST00000558093 IPO5O00410 1097 aaKnown RBP3.69□□□□□ -1.82
SPG11-206ENST00000558093 CYP1A2P05177 515 aa3.69□□□□□ -1.82
SPG11-206ENST00000558093 FGF2P09038 288 aa3.69□□□□□ -1.82
SPG11-206ENST00000558093 T-ENOLP0DO92 83 aa3.69□□□□□ -1.82
SPG11-206ENST00000558093 CYP4B1P13584 511 aa3.69□□□□□ -1.82
SPG11-206ENST00000558093 HOXB2P14652 356 aa3.69□□□□□ -1.82
SPG11-206ENST00000558093 TRAPPC10P48553 1259 aa3.69□□□□□ -1.82
SPG11-206ENST00000558093 MCM2P49736 904 aa3.69□□□□□ -1.82
SPG11-206ENST00000558093 ZBTB16Q05516 673 aa3.69□□□□□ -1.82
SPG11-206ENST00000558093 GPR18Q14330 331 aa3.69□□□□□ -1.82
SPG11-206ENST00000558093 SEMA3AQ14563 771 aa3.69□□□□□ -1.82
SPG11-206ENST00000558093 LRRC24Q50LG9 513 aa3.69□□□□□ -1.82
SPG11-206ENST00000558093 MTFR2Q6P444 385 aa3.69□□□□□ -1.82
SPG11-206ENST00000558093 Q6ZTK2 550 aa3.69□□□□□ -1.82
SPG11-206ENST00000558093 SCN4BQ8IWT1 228 aa3.69□□□□□ -1.82
SPG11-206ENST00000558093 FAM217AQ8IXS0 508 aa3.69□□□□□ -1.82
SPG11-206ENST00000558093 PELI3Q8N2H9 469 aa3.69□□□□□ -1.82
SPG11-206ENST00000558093 MYCT1Q8N699 235 aa3.69□□□□□ -1.82
SPG11-206ENST00000558093 PTGR2Q8N8N7 351 aaPredicted RBP3.69□□□□□ -1.82
SPG11-206ENST00000558093 C7orf57Q8NEG2 295 aa3.69□□□□□ -1.82
SPG11-206ENST00000558093 OR6Y1Q8NGX8 325 aa3.69□□□□□ -1.82
SPG11-206ENST00000558093 TRAPPC12Q8WVT3 735 aa3.69□□□□□ -1.82
SPG11-206ENST00000558093 CCT6BQ92526 530 aa3.69□□□□□ -1.82
SPG11-206ENST00000558093 LYZL4Q96KX0 146 aa3.69□□□□□ -1.82
SPG11-206ENST00000558093 RPS6KC1Q96S38 1066 aa3.69□□□□□ -1.82
SPG11-206ENST00000558093 CADM1Q9BY67 442 aaKnown RBP3.69□□□□□ -1.82
SPG11-206ENST00000558093 FRMD8Q9BZ67 464 aaPredicted RBP3.69□□□□□ -1.82
SPG11-206ENST00000558093 ISCUQ9H1K1 167 aa3.69□□□□□ -1.82
SPG11-206ENST00000558093 HIPK3Q9H422 1215 aa3.69□□□□□ -1.82
SPG11-206ENST00000558093 MAP6D1Q9H9H5 199 aa3.69□□□□□ -1.82
SPG11-206ENST00000558093 SIRT3Q9NTG7 399 aaPredicted RBP3.69□□□□□ -1.82
SPG11-206ENST00000558093 INSL5Q9Y5Q6 135 aa3.69□□□□□ -1.82
SPG11-206ENST00000558093 SLC4A4Q9Y6R1 1079 aa3.69□□□□□ -1.82
SPG11-206ENST00000558093 STRNO43815 780 aa3.68□□□□□ -1.82
SPG11-206ENST00000558093 TMCC1O94876 653 aa3.68□□□□□ -1.82
SPG11-206ENST00000558093 CYP21A2P08686 494 aa3.68□□□□□ -1.82
SPG11-206ENST00000558093 LYL1P12980 280 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms