RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 C11orf70Q9BRQ4 267 aa9.04□□□□□ -0.96
SNRPA1-206ENST00000558059 FEM1AQ9BSK4 669 aa9.04□□□□□ -0.96
SNRPA1-206ENST00000558059 NUSAP1Q9BXS6 441 aaKnown RBP9.04□□□□□ -0.96
SNRPA1-206ENST00000558059 RAB6CQ9H0N0 254 aa9.04□□□□□ -0.96
SNRPA1-206ENST00000558059 TMEM9BQ9NQ34 198 aa9.04□□□□□ -0.96
SNRPA1-206ENST00000558059 FSCN3Q9NQT6 498 aa9.04□□□□□ -0.96
SNRPA1-206ENST00000558059 METTL5Q9NRN9 209 aaKnown RBP9.04□□□□□ -0.96
SNRPA1-206ENST00000558059 TMEM51Q9NW97 253 aa9.04□□□□□ -0.96
SNRPA1-206ENST00000558059 SLC6A14Q9UN76 642 aa9.04□□□□□ -0.96
SNRPA1-206ENST00000558059 TBC1D30Q9Y2I9 924 aa9.04□□□□□ -0.96
SNRPA1-206ENST00000558059 CEP295Q9C0D2 2601 aa9.03□□□□□ -0.96
SNRPA1-206ENST00000558059 IGLV3-10A0A075B6K4 115 aa9.03□□□□□ -0.96
SNRPA1-206ENST00000558059 EDDM13A0A1B0GTR0 161 aa9.03□□□□□ -0.96
SNRPA1-206ENST00000558059 C2CD4BA6NLJ0 364 aa9.03□□□□□ -0.96
SNRPA1-206ENST00000558059 CFIP05156 583 aa9.03□□□□□ -0.96
SNRPA1-206ENST00000558059 ENGP17813 658 aa9.03□□□□□ -0.96
SNRPA1-206ENST00000558059 RDXP35241 583 aaKnown RBP9.03□□□□□ -0.96
SNRPA1-206ENST00000558059 CDH4P55283 916 aa9.03□□□□□ -0.96
SNRPA1-206ENST00000558059 OXCT1P55809 520 aa9.03□□□□□ -0.96
SNRPA1-206ENST00000558059 GSCP56915 257 aaPredicted RBP9.03□□□□□ -0.96
SNRPA1-206ENST00000558059 ATP11AP98196 1134 aa9.03□□□□□ -0.96
SNRPA1-206ENST00000558059 SULT2A1Q06520 285 aa9.03□□□□□ -0.96
SNRPA1-206ENST00000558059 C15orf59Q2T9L4 293 aaPredicted RBP9.03□□□□□ -0.96
SNRPA1-206ENST00000558059 KLHL40Q2TBA0 621 aa9.03□□□□□ -0.96
SNRPA1-206ENST00000558059 CCDC14Q49A88 953 aa9.03□□□□□ -0.96
SNRPA1-206ENST00000558059 WDR45BQ5MNZ6 344 aa9.03□□□□□ -0.96
SNRPA1-206ENST00000558059 SYCP2LQ5T4T6 812 aa9.03□□□□□ -0.96
SNRPA1-206ENST00000558059 SH3PXD2AQ5TCZ1 1133 aa9.03□□□□□ -0.96
SNRPA1-206ENST00000558059 DCAF12L1Q5VU92 463 aa9.03□□□□□ -0.96
SNRPA1-206ENST00000558059 ZNF776Q68DI1 518 aaPredicted RBP9.03□□□□□ -0.96
SNRPA1-206ENST00000558059 RABEPKQ7Z6M1 372 aa9.03□□□□□ -0.96
SNRPA1-206ENST00000558059 FAM124AQ86V42 546 aa9.03□□□□□ -0.96
SNRPA1-206ENST00000558059 FAM131BQ86XD5 332 aa9.03□□□□□ -0.96
SNRPA1-206ENST00000558059 RGL4Q8IZJ4 473 aa9.03□□□□□ -0.96
SNRPA1-206ENST00000558059 C1orf216Q8TAB5 229 aa9.03□□□□□ -0.96
SNRPA1-206ENST00000558059 FRS2Q8WU20 508 aa9.03□□□□□ -0.96
SNRPA1-206ENST00000558059 CENPIQ92674 756 aaPredicted RBP9.03□□□□□ -0.96
SNRPA1-206ENST00000558059 PTPRN2Q92932 1015 aa9.03□□□□□ -0.96
SNRPA1-206ENST00000558059 HAPLN3Q96S86 360 aa9.03□□□□□ -0.96
SNRPA1-206ENST00000558059 AGPAT1Q99943 283 aa9.03□□□□□ -0.96
SNRPA1-206ENST00000558059 SYT11Q9BT88 431 aa9.03□□□□□ -0.96
SNRPA1-206ENST00000558059 PABPC3Q9H361 631 aaKnown RBP9.03□□□□□ -0.96
SNRPA1-206ENST00000558059 C6orf106Q9H6K1 298 aaPredicted RBP9.03□□□□□ -0.96
SNRPA1-206ENST00000558059 ADAM22Q9P0K1 906 aa9.03□□□□□ -0.96
SNRPA1-206ENST00000558059 ZNF212Q9UDV6 495 aa9.03□□□□□ -0.96
SNRPA1-206ENST00000558059 PAXBP1Q9Y5B6 917 aa9.03□□□□□ -0.96
SNRPA1-206ENST00000558059 A0A1B0GTH6 734 aa9.02□□□□□ -0.97
SNRPA1-206ENST00000558059 TCRBV5S1A1TA0A578 114 aa9.02□□□□□ -0.97
SNRPA1-206ENST00000558059 SYCE3A1L190 88 aa9.02□□□□□ -0.97
SNRPA1-206ENST00000558059 MEI4A8MW99 385 aa9.02□□□□□ -0.97
SNRPA1-206ENST00000558059 E9PAM4 449 aa9.02□□□□□ -0.97
SNRPA1-206ENST00000558059 MID1O15344 667 aa9.02□□□□□ -0.97
SNRPA1-206ENST00000558059 ATP9BO43861 1147 aa9.02□□□□□ -0.97
SNRPA1-206ENST00000558059 KCNK5O95279 499 aa9.02□□□□□ -0.97
SNRPA1-206ENST00000558059 DNTTP04053 509 aa9.02□□□□□ -0.97
SNRPA1-206ENST00000558059 VAV1P15498 845 aa9.02□□□□□ -0.97
SNRPA1-206ENST00000558059 FERP16591 822 aa9.02□□□□□ -0.97
SNRPA1-206ENST00000558059 RFC1P35251 1148 aaPredicted RBP9.02□□□□□ -0.97
SNRPA1-206ENST00000558059 ADRA1BP35368 520 aa9.02□□□□□ -0.97
SNRPA1-206ENST00000558059 PTPN9P43378 593 aa9.02□□□□□ -0.97
SNRPA1-206ENST00000558059 MAPK8P45983 427 aa9.02□□□□□ -0.97
SNRPA1-206ENST00000558059 NSFP46459 744 aaKnown RBP9.02□□□□□ -0.97
SNRPA1-206ENST00000558059 GFPT1Q06210 699 aaPredicted RBP9.02□□□□□ -0.97
SNRPA1-206ENST00000558059 NR1I3Q14994 352 aa9.02□□□□□ -0.97
SNRPA1-206ENST00000558059 CST6Q15828 149 aa9.02□□□□□ -0.97
SNRPA1-206ENST00000558059 ACBD5Q5T8D3 534 aaPredicted RBP9.02□□□□□ -0.97
SNRPA1-206ENST00000558059 DAB2IPQ5VWQ8 1189 aa9.02□□□□□ -0.97
SNRPA1-206ENST00000558059 RNF219Q5W0B1 726 aaPredicted RBP9.02□□□□□ -0.97
SNRPA1-206ENST00000558059 USP30Q70CQ3 517 aa9.02□□□□□ -0.97
SNRPA1-206ENST00000558059 MON1BQ7L1V2 547 aa9.02□□□□□ -0.97
SNRPA1-206ENST00000558059 MMAAQ8IVH4 418 aaKnown RBP9.02□□□□□ -0.97
SNRPA1-206ENST00000558059 STK40Q8N2I9 435 aa9.02□□□□□ -0.97
SNRPA1-206ENST00000558059 WNT2BQ93097 391 aa9.02□□□□□ -0.97
SNRPA1-206ENST00000558059 PPP1R9BQ96SB3 815 aa9.02□□□□□ -0.97
SNRPA1-206ENST00000558059 PSMB7Q99436 277 aa9.02□□□□□ -0.97
SNRPA1-206ENST00000558059 BTBD1Q9H0C5 482 aa9.02□□□□□ -0.97
SNRPA1-206ENST00000558059 PCED1AQ9H1Q7 454 aa9.02□□□□□ -0.97
SNRPA1-206ENST00000558059 MPP6Q9NZW5 540 aa9.02□□□□□ -0.97
SNRPA1-206ENST00000558059 SERGEFQ9UGK8 458 aa9.02□□□□□ -0.97
SNRPA1-206ENST00000558059 MYO6Q9UM54 1294 aa9.02□□□□□ -0.97
SNRPA1-206ENST00000558059 SCML1Q9UN30 329 aa9.02□□□□□ -0.97
SNRPA1-206ENST00000558059 SLCO1B1Q9Y6L6 691 aa9.02□□□□□ -0.97
SNRPA1-206ENST00000558059 TMEM131Q92545 1883 aa9.02□□□□□ -0.97
SNRPA1-206ENST00000558059 MAP1BP46821 2468 aaKnown RBP9.02□□□□□ -0.97
SNRPA1-206ENST00000558059 TP53BP1Q12888 1972 aaPredicted RBP9.01□□□□□ -0.97
SNRPA1-206ENST00000558059 EPG5Q9HCE0 2579 aa9.01□□□□□ -0.97
SNRPA1-206ENST00000558059 A0A0D9SEW6 157 aa9.01□□□□□ -0.97
SNRPA1-206ENST00000558059 A0A1B0GTW7 788 aa9.01□□□□□ -0.97
SNRPA1-206ENST00000558059 A0A1W2PQC6 194 aa9.01□□□□□ -0.97
SNRPA1-206ENST00000558059 SIGLEC16A6NMB1 481 aa9.01□□□□□ -0.97
SNRPA1-206ENST00000558059 C10orf142B7Z368 130 aa9.01□□□□□ -0.97
SNRPA1-206ENST00000558059 SNAP91O60641 907 aa9.01□□□□□ -0.97
SNRPA1-206ENST00000558059 RNASEH1O60930 286 aaKnown RBP9.01□□□□□ -0.97
SNRPA1-206ENST00000558059 SRGAP2O75044 1071 aa9.01□□□□□ -0.97
SNRPA1-206ENST00000558059 PLXNA2O75051 1894 aa9.01□□□□□ -0.97
SNRPA1-206ENST00000558059 SEMA4FO95754 770 aa9.01□□□□□ -0.97
SNRPA1-206ENST00000558059 MT-CO1P00395 513 aa9.01□□□□□ -0.97
SNRPA1-206ENST00000558059 CALB1P05937 261 aa9.01□□□□□ -0.97
SNRPA1-206ENST00000558059 RHOCP08134 193 aa9.01□□□□□ -0.97
SNRPA1-206ENST00000558059 ADRB1P08588 477 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms