RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 CIPCQ9C0C6 399 aa15.67■□□□□ 0.1
NEDD1-213ENST00000557644 SLC39A8Q9C0K1 460 aa15.67■□□□□ 0.1
NEDD1-213ENST00000557644 RETREG1Q9H6L5 497 aa15.67■□□□□ 0.1
NEDD1-213ENST00000557644 LRRC19Q9H756 370 aa15.67■□□□□ 0.1
NEDD1-213ENST00000557644 LTB4R2Q9NPC1 389 aa15.67■□□□□ 0.1
NEDD1-213ENST00000557644 HCN2Q9UL51 889 aa15.67■□□□□ 0.1
NEDD1-213ENST00000557644 ZNF487B1APH4 448 aa15.66■□□□□ 0.1
NEDD1-213ENST00000557644 MFSD11O43934 449 aa15.66■□□□□ 0.1
NEDD1-213ENST00000557644 CTSOP43234 321 aaPredicted RBP15.66■□□□□ 0.1
NEDD1-213ENST00000557644 GBE1Q04446 702 aa15.66■□□□□ 0.1
NEDD1-213ENST00000557644 MBLAC2Q68D91 279 aa15.66■□□□□ 0.1
NEDD1-213ENST00000557644 C1orf228Q6PIY5 440 aa15.66■□□□□ 0.1
NEDD1-213ENST00000557644 NPNTQ6UXI9 565 aa15.66■□□□□ 0.1
NEDD1-213ENST00000557644 AHI1Q8N157 1196 aa15.66■□□□□ 0.1
NEDD1-213ENST00000557644 ZNF557Q8N988 423 aaPredicted RBP15.66■□□□□ 0.1
NEDD1-213ENST00000557644 FLCNQ8NFG4 579 aa15.66■□□□□ 0.1
NEDD1-213ENST00000557644 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.66■□□□□ 0.1
NEDD1-213ENST00000557644 CYB5D2Q8WUJ1 264 aa15.66■□□□□ 0.1
NEDD1-213ENST00000557644 ARHGEF2Q92974 986 aaKnown RBP15.66■□□□□ 0.1
NEDD1-213ENST00000557644 SAE1Q9UBE0 346 aaPredicted RBP15.66■□□□□ 0.1
NEDD1-213ENST00000557644 A0A0A0MRY4 1105 aa15.65■□□□□ 0.1
NEDD1-213ENST00000557644 FAM170BA6NMN3 283 aa15.65■□□□□ 0.1
NEDD1-213ENST00000557644 SNAP91O60641 907 aa15.65■□□□□ 0.1
NEDD1-213ENST00000557644 CST8O60676 142 aa15.65■□□□□ 0.1
NEDD1-213ENST00000557644 DRD1P21728 446 aa15.65■□□□□ 0.1
NEDD1-213ENST00000557644 SLC10A2Q12908 348 aaPredicted RBP15.65■□□□□ 0.1
NEDD1-213ENST00000557644 AFMIDQ63HM1 303 aa15.65■□□□□ 0.1
NEDD1-213ENST00000557644 SLC9A4Q6AI14 798 aa15.65■□□□□ 0.1
NEDD1-213ENST00000557644 LRRN4Q8WUT4 740 aa15.65■□□□□ 0.1
NEDD1-213ENST00000557644 OSBPL8Q9BZF1 889 aa15.65■□□□□ 0.1
NEDD1-213ENST00000557644 ELOVL2Q9NXB9 296 aa15.65■□□□□ 0.1
NEDD1-213ENST00000557644 NUP205Q92621 2012 aa15.65■□□□□ 0.1
NEDD1-213ENST00000557644 RASA4BC9J798 803 aa15.65■□□□□ 0.1
NEDD1-213ENST00000557644 DFFAO00273 331 aa15.65■□□□□ 0.1
NEDD1-213ENST00000557644 APOL1O14791 398 aa15.65■□□□□ 0.1
NEDD1-213ENST00000557644 RASA4O43374 803 aa15.65■□□□□ 0.1
NEDD1-213ENST00000557644 CHRNB1P11230 501 aa15.65■□□□□ 0.1
NEDD1-213ENST00000557644 FZD5Q13467 585 aa15.65■□□□□ 0.1
NEDD1-213ENST00000557644 PPP2R5EQ16537 467 aa15.65■□□□□ 0.1
NEDD1-213ENST00000557644 IL31Q6EBC2 164 aa15.65■□□□□ 0.1
NEDD1-213ENST00000557644 ARHGAP36Q6ZRI8 547 aa15.65■□□□□ 0.1
NEDD1-213ENST00000557644 SUGP1Q8IWZ8 645 aaKnown RBP15.65■□□□□ 0.1
NEDD1-213ENST00000557644 RPL10LQ96L21 214 aaKnown RBP15.65■□□□□ 0.1
NEDD1-213ENST00000557644 EPHX3Q9H6B9 360 aa15.65■□□□□ 0.1
NEDD1-213ENST00000557644 ATP13A1Q9HD20 1204 aa15.65■□□□□ 0.1
NEDD1-213ENST00000557644 HEY1Q9Y5J3 304 aa15.65■□□□□ 0.1
NEDD1-213ENST00000557644 ACTL7AQ9Y615 435 aa15.65■□□□□ 0.1
NEDD1-213ENST00000557644 ATG2BQ96BY7 2078 aa15.65■□□□□ 0.1
NEDD1-213ENST00000557644 CBX4O00257 560 aa15.64■□□□□ 0.09
NEDD1-213ENST00000557644 MSNP26038 577 aaKnown RBP15.64■□□□□ 0.09
NEDD1-213ENST00000557644 PAPOLAP51003 745 aaKnown RBP15.64■□□□□ 0.09
NEDD1-213ENST00000557644 NDST2P52849 883 aa15.64■□□□□ 0.09
NEDD1-213ENST00000557644 PLK1P53350 603 aa15.64■□□□□ 0.09
NEDD1-213ENST00000557644 COPS2P61201 443 aa15.64■□□□□ 0.09
NEDD1-213ENST00000557644 SLC12A1Q13621 1099 aa15.64■□□□□ 0.09
NEDD1-213ENST00000557644 PAFAH1B3Q15102 231 aaKnown RBP15.64■□□□□ 0.09
NEDD1-213ENST00000557644 PREPLQ4J6C6 727 aaPredicted RBP15.64■□□□□ 0.09
NEDD1-213ENST00000557644 ZNF783Q6ZMS7 281 aa15.64■□□□□ 0.09
NEDD1-213ENST00000557644 LEKR1Q6ZMV7 388 aa15.64■□□□□ 0.09
NEDD1-213ENST00000557644 Q6ZS52 159 aa15.64■□□□□ 0.09
NEDD1-213ENST00000557644 ZNF354CQ86Y25 554 aa15.64■□□□□ 0.09
NEDD1-213ENST00000557644 EXOC4Q96A65 974 aa15.64■□□□□ 0.09
NEDD1-213ENST00000557644 HAUS1Q96CS2 278 aa15.64■□□□□ 0.09
NEDD1-213ENST00000557644 C16orf45Q96MC5 204 aaPredicted RBP15.64■□□□□ 0.09
NEDD1-213ENST00000557644 MAGEH1Q9H213 219 aa15.64■□□□□ 0.09
NEDD1-213ENST00000557644 MFSD1Q9H3U5 465 aa15.64■□□□□ 0.09
NEDD1-213ENST00000557644 VPS51Q9UID3 782 aa15.64■□□□□ 0.09
NEDD1-213ENST00000557644 MRPS17Q9Y2R5 130 aaKnown RBP15.64■□□□□ 0.09
NEDD1-213ENST00000557644 TCRBV7S2A1N4TA0A589 114 aa15.64■□□□□ 0.09
NEDD1-213ENST00000557644 TMEM221A6NGB7 291 aa15.64■□□□□ 0.09
NEDD1-213ENST00000557644 M0R296 226 aa15.64■□□□□ 0.09
NEDD1-213ENST00000557644 TNFRSF10AO00220 468 aa15.64■□□□□ 0.09
NEDD1-213ENST00000557644 POLR2EP19388 210 aaKnown RBP15.64■□□□□ 0.09
NEDD1-213ENST00000557644 KIR2DL1P43626 348 aaPredicted RBP15.64■□□□□ 0.09
NEDD1-213ENST00000557644 STK19P49842 368 aaPredicted RBP15.64■□□□□ 0.09
NEDD1-213ENST00000557644 OXCT1P55809 520 aa15.64■□□□□ 0.09
NEDD1-213ENST00000557644 PARP15Q460N3 678 aa15.64■□□□□ 0.09
NEDD1-213ENST00000557644 C2orf27AQ580R0 203 aa15.64■□□□□ 0.09
NEDD1-213ENST00000557644 EGFLAMQ63HQ2 1017 aa15.64■□□□□ 0.09
NEDD1-213ENST00000557644 LINGO4Q6UY18 593 aa15.64■□□□□ 0.09
NEDD1-213ENST00000557644 PJA1Q8NG27 643 aa15.64■□□□□ 0.09
NEDD1-213ENST00000557644 WFIKKN2Q8TEU8 576 aa15.64■□□□□ 0.09
NEDD1-213ENST00000557644 TTC17Q96AE7 1141 aa15.64■□□□□ 0.09
NEDD1-213ENST00000557644 ACOX2Q99424 681 aa15.64■□□□□ 0.09
NEDD1-213ENST00000557644 ACE2Q9BYF1 805 aaPredicted RBP15.64■□□□□ 0.09
NEDD1-213ENST00000557644 CARD9Q9H257 536 aa15.64■□□□□ 0.09
NEDD1-213ENST00000557644 LMAN1LQ9HAT1 526 aa15.64■□□□□ 0.09
NEDD1-213ENST00000557644 DONSONQ9NYP3 566 aa15.64■□□□□ 0.09
NEDD1-213ENST00000557644 DTLQ9NZJ0 730 aa15.64■□□□□ 0.09
NEDD1-213ENST00000557644 RNF40O75150 1001 aa15.63■□□□□ 0.09
NEDD1-213ENST00000557644 MT-CO1P00395 513 aa15.63■□□□□ 0.09
NEDD1-213ENST00000557644 CHRM1P11229 460 aaPredicted RBP15.63■□□□□ 0.09
NEDD1-213ENST00000557644 PECAM1P16284 738 aaPredicted RBP15.63■□□□□ 0.09
NEDD1-213ENST00000557644 PTPN7P35236 360 aa15.63■□□□□ 0.09
NEDD1-213ENST00000557644 SERPINB6P35237 376 aa15.63■□□□□ 0.09
NEDD1-213ENST00000557644 TIE1P35590 1138 aa15.63■□□□□ 0.09
NEDD1-213ENST00000557644 TNFRSF4P43489 277 aa15.63■□□□□ 0.09
NEDD1-213ENST00000557644 YBEYP58557 167 aaPredicted RBP15.63■□□□□ 0.09
NEDD1-213ENST00000557644 SERINC3Q13530 473 aa15.63■□□□□ 0.09
NEDD1-213ENST00000557644 PTPRNQ16849 979 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms