RNA–Protein interactions for RNA: ENST00000557265.5

SNX6-209, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-209ENST00000557265 PDGFRAP16234 1089 aa12.68□□□□□ -0.38
SNX6-209ENST00000557265 DGKAP23743 735 aa12.68□□□□□ -0.38
SNX6-209ENST00000557265 PCBP4P57723 403 aaKnown RBP12.68□□□□□ -0.38
SNX6-209ENST00000557265 SULT2A1Q06520 285 aa12.68□□□□□ -0.38
SNX6-209ENST00000557265 CNTN1Q12860 1018 aa12.68□□□□□ -0.38
SNX6-209ENST00000557265 STILQ15468 1287 aa12.68□□□□□ -0.38
SNX6-209ENST00000557265 SETMARQ53H47 684 aaPredicted RBP12.68□□□□□ -0.38
SNX6-209ENST00000557265 HS1BP3Q53T59 392 aa12.68□□□□□ -0.38
SNX6-209ENST00000557265 BROXQ5VW32 411 aa12.68□□□□□ -0.38
SNX6-209ENST00000557265 FAM46CQ5VWP2 391 aa12.68□□□□□ -0.38
SNX6-209ENST00000557265 TMC6Q7Z403 805 aa12.68□□□□□ -0.38
SNX6-209ENST00000557265 DSG4Q86SJ6 1040 aa12.68□□□□□ -0.38
SNX6-209ENST00000557265 TRIM69Q86WT6 500 aa12.68□□□□□ -0.38
SNX6-209ENST00000557265 CIR1Q86X95 450 aaPredicted RBP12.68□□□□□ -0.38
SNX6-209ENST00000557265 OR8D1Q8WZ84 308 aa12.68□□□□□ -0.38
SNX6-209ENST00000557265 SLC35C1Q96A29 364 aa12.68□□□□□ -0.38
SNX6-209ENST00000557265 FAM149B1Q96BN6 582 aa12.68□□□□□ -0.38
SNX6-209ENST00000557265 HIC2Q96JB3 615 aa12.68□□□□□ -0.38
SNX6-209ENST00000557265 ZNF578Q96N58 590 aaPredicted RBP12.68□□□□□ -0.38
SNX6-209ENST00000557265 CPNE5Q9HCH3 593 aa12.68□□□□□ -0.38
SNX6-209ENST00000557265 UCKL1Q9NWZ5 548 aa12.68□□□□□ -0.38
SNX6-209ENST00000557265 SHROOM3Q8TF72 1996 aa12.67□□□□□ -0.38
SNX6-209ENST00000557265 FFAR2O15552 330 aa12.67□□□□□ -0.38
SNX6-209ENST00000557265 SART1O43290 800 aaKnown RBP12.67□□□□□ -0.38
SNX6-209ENST00000557265 OPA1O60313 960 aa12.67□□□□□ -0.38
SNX6-209ENST00000557265 TMPRSS3P57727 454 aa12.67□□□□□ -0.38
SNX6-209ENST00000557265 RHDQ02161 417 aa12.67□□□□□ -0.38
SNX6-209ENST00000557265 SLC12A1Q13621 1099 aa12.67□□□□□ -0.38
SNX6-209ENST00000557265 ACCSLQ4AC99 568 aa12.67□□□□□ -0.38
SNX6-209ENST00000557265 ARHGAP40Q5TG30 622 aa12.67□□□□□ -0.38
SNX6-209ENST00000557265 AGBL4Q5VU57 503 aa12.67□□□□□ -0.38
SNX6-209ENST00000557265 CDCP2Q5VXM1 449 aa12.67□□□□□ -0.38
SNX6-209ENST00000557265 CCAR2Q8N163 923 aaKnown RBP12.67□□□□□ -0.38
SNX6-209ENST00000557265 OR4C6Q8NH72 309 aa12.67□□□□□ -0.38
SNX6-209ENST00000557265 KAT5Q92993 513 aa12.67□□□□□ -0.38
SNX6-209ENST00000557265 SNX21Q969T3 373 aa12.67□□□□□ -0.38
SNX6-209ENST00000557265 BTN2A3PQ96KV6 586 aa12.67□□□□□ -0.38
SNX6-209ENST00000557265 MYOCQ99972 504 aa12.67□□□□□ -0.38
SNX6-209ENST00000557265 ST7Q9NRC1 585 aa12.67□□□□□ -0.38
SNX6-209ENST00000557265 KLHL11Q9NVR0 708 aa12.67□□□□□ -0.38
SNX6-209ENST00000557265 ARMCX3Q9UH62 379 aaPredicted RBP12.67□□□□□ -0.38
SNX6-209ENST00000557265 PPM1HQ9ULR3 514 aa12.67□□□□□ -0.38
SNX6-209ENST00000557265 MGAQ8IWI9 3026 aa12.67□□□□□ -0.38
SNX6-209ENST00000557265 A0A1B0GVM2 712 aa12.66□□□□□ -0.38
SNX6-209ENST00000557265 F5H5T6 163 aa12.66□□□□□ -0.38
SNX6-209ENST00000557265 SLC31A1O15431 190 aa12.66□□□□□ -0.38
SNX6-209ENST00000557265 RNGTTO60942 597 aaKnown RBP12.66□□□□□ -0.38
SNX6-209ENST00000557265 USP12O75317 370 aa12.66□□□□□ -0.38
SNX6-209ENST00000557265 THEGLP0DJG4 465 aa12.66□□□□□ -0.38
SNX6-209ENST00000557265 CKMT1AP12532 417 aa12.66□□□□□ -0.38
SNX6-209ENST00000557265 MYF5P13349 255 aa12.66□□□□□ -0.38
SNX6-209ENST00000557265 PRLRP16471 622 aa12.66□□□□□ -0.38
SNX6-209ENST00000557265 ZNF18P17022 549 aa12.66□□□□□ -0.38
SNX6-209ENST00000557265 PRCPP42785 496 aa12.66□□□□□ -0.38
SNX6-209ENST00000557265 PLK1P53350 603 aa12.66□□□□□ -0.38
SNX6-209ENST00000557265 UCNP55089 124 aa12.66□□□□□ -0.38
SNX6-209ENST00000557265 TAS2R38P59533 333 aa12.66□□□□□ -0.38
SNX6-209ENST00000557265 GABREP78334 506 aa12.66□□□□□ -0.38
SNX6-209ENST00000557265 FKBP3Q00688 224 aaKnown RBP12.66□□□□□ -0.38
SNX6-209ENST00000557265 KCNMA1Q12791 1236 aa12.66□□□□□ -0.38
SNX6-209ENST00000557265 ANKRD40Q6AI12 368 aa12.66□□□□□ -0.38
SNX6-209ENST00000557265 BEND5Q7L4P6 421 aa12.66□□□□□ -0.38
SNX6-209ENST00000557265 LSMEM2Q8N112 164 aa12.66□□□□□ -0.38
SNX6-209ENST00000557265 PPM1KQ8N3J5 372 aa12.66□□□□□ -0.38
SNX6-209ENST00000557265 TMEM145Q8NBT3 493 aa12.66□□□□□ -0.38
SNX6-209ENST00000557265 KLK6Q92876 244 aa12.66□□□□□ -0.38
SNX6-209ENST00000557265 WBP1Q96G27 269 aa12.66□□□□□ -0.38
SNX6-209ENST00000557265 NT5C1BQ96P26 610 aa12.66□□□□□ -0.38
SNX6-209ENST00000557265 DEPDC7Q96QD5 511 aa12.66□□□□□ -0.38
SNX6-209ENST00000557265 TSG101Q99816 390 aa12.66□□□□□ -0.38
SNX6-209ENST00000557265 OSBPL2Q9H1P3 480 aa12.66□□□□□ -0.38
SNX6-209ENST00000557265 GOLPH3LQ9H4A5 285 aa12.66□□□□□ -0.38
SNX6-209ENST00000557265 CAAP1Q9H8G2 361 aa12.66□□□□□ -0.38
SNX6-209ENST00000557265 PREBQ9HCU5 417 aa12.66□□□□□ -0.38
SNX6-209ENST00000557265 ARID1BQ8NFD5 2236 aaPredicted RBP12.66□□□□□ -0.38
SNX6-209ENST00000557265 A0A1W2PQU0 124 aa12.65□□□□□ -0.38
SNX6-209ENST00000557265 KCNU1A8MYU2 1149 aa12.65□□□□□ -0.38
SNX6-209ENST00000557265 C1QTNF3-AMACRE9PGA6 284 aa12.65□□□□□ -0.38
SNX6-209ENST00000557265 MCF2LO15068 1137 aa12.65□□□□□ -0.38
SNX6-209ENST00000557265 KLK10O43240 276 aa12.65□□□□□ -0.38
SNX6-209ENST00000557265 ATP9BO43861 1147 aa12.65□□□□□ -0.38
SNX6-209ENST00000557265 BNIP3LO60238 219 aa12.65□□□□□ -0.38
SNX6-209ENST00000557265 CSO75390 466 aaKnown RBP12.65□□□□□ -0.38
SNX6-209ENST00000557265 PIAS2O75928 621 aa12.65□□□□□ -0.38
SNX6-209ENST00000557265 DXOO77932 396 aaKnown RBP12.65□□□□□ -0.38
SNX6-209ENST00000557265 ZNF202O95125 648 aa12.65□□□□□ -0.38
SNX6-209ENST00000557265 TRUB2O95900 331 aaKnown RBP12.65□□□□□ -0.38
SNX6-209ENST00000557265 GIMD1P0DJR0 217 aa12.65□□□□□ -0.38
SNX6-209ENST00000557265 GPD2P43304 727 aa12.65□□□□□ -0.38
SNX6-209ENST00000557265 LSSP48449 732 aa12.65□□□□□ -0.38
SNX6-209ENST00000557265 RPL34P49207 117 aaKnown RBP12.65□□□□□ -0.38
SNX6-209ENST00000557265 FMO5P49326 533 aa12.65□□□□□ -0.38
SNX6-209ENST00000557265 PMS1P54277 932 aaKnown RBP12.65□□□□□ -0.38
SNX6-209ENST00000557265 OXCT1P55809 520 aa12.65□□□□□ -0.38
SNX6-209ENST00000557265 PITX1P78337 314 aaPredicted RBP12.65□□□□□ -0.38
SNX6-209ENST00000557265 KRT85P78386 507 aa12.65□□□□□ -0.38
SNX6-209ENST00000557265 DLG2Q15700 870 aa12.65□□□□□ -0.38
SNX6-209ENST00000557265 CXorf57Q6NSI4 855 aaKnown RBP12.65□□□□□ -0.38
SNX6-209ENST00000557265 Q6ZVU0 165 aa12.65□□□□□ -0.38
SNX6-209ENST00000557265 ATP6V0D2Q8N8Y2 350 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms