RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 PCDHGA5Q9Y5G8 931 aa23.47■■□□□ 1.35
TDP1-216ENST00000556867 ILVBLA1L0T0 632 aa23.46■■□□□ 1.35
TDP1-216ENST00000556867 TTC34A8MYJ7 566 aa23.46■■□□□ 1.35
TDP1-216ENST00000556867 RHOQP17081 205 aa23.46■■□□□ 1.35
TDP1-216ENST00000556867 TGM1P22735 817 aa23.46■■□□□ 1.35
TDP1-216ENST00000556867 NNMTP40261 264 aa23.46■■□□□ 1.35
TDP1-216ENST00000556867 NUMBP49757 651 aa23.46■■□□□ 1.35
TDP1-216ENST00000556867 TSR1Q2NL82 804 aaKnown RBP23.46■■□□□ 1.35
TDP1-216ENST00000556867 ASTE1Q2TB18 679 aaPredicted RBP23.46■■□□□ 1.35
TDP1-216ENST00000556867 CCDC122Q5T0U0 273 aa23.46■■□□□ 1.35
TDP1-216ENST00000556867 LPCAT2Q7L5N7 544 aa23.46■■□□□ 1.35
TDP1-216ENST00000556867 NLRP14Q86W24 1093 aa23.46■■□□□ 1.35
TDP1-216ENST00000556867 GAS2L3Q86XJ1 694 aa23.46■■□□□ 1.35
TDP1-216ENST00000556867 CNGA4Q8IV77 575 aa23.46■■□□□ 1.35
TDP1-216ENST00000556867 ARFGAP1Q8N6T3 406 aa23.46■■□□□ 1.35
TDP1-216ENST00000556867 DCAF4L2Q8NA75 395 aa23.46■■□□□ 1.35
TDP1-216ENST00000556867 CEP192Q8TEP8 1941 aa23.46■■□□□ 1.35
TDP1-216ENST00000556867 C2orf49Q9BVC5 232 aaPredicted RBP23.46■■□□□ 1.35
TDP1-216ENST00000556867 MTG2Q9H4K7 406 aa23.46■■□□□ 1.35
TDP1-216ENST00000556867 CD93Q9NPY3 652 aa23.46■■□□□ 1.35
TDP1-216ENST00000556867 ITM2CQ9NQX7 267 aa23.46■■□□□ 1.35
TDP1-216ENST00000556867 TMEM248Q9NWD8 314 aa23.46■■□□□ 1.35
TDP1-216ENST00000556867 SLC25A13Q9UJS0 675 aa23.46■■□□□ 1.35
TDP1-216ENST00000556867 TNRC6BQ9UPQ9 1833 aaKnown RBP23.46■■□□□ 1.35
TDP1-216ENST00000556867 EDDM13A0A1B0GTR0 161 aa23.45■■□□□ 1.34
TDP1-216ENST00000556867 TARSL2A2RTX5 802 aaKnown RBP23.45■■□□□ 1.34
TDP1-216ENST00000556867 MAP3K13O43283 966 aa23.45■■□□□ 1.34
TDP1-216ENST00000556867 SIN3BO75182 1162 aa23.45■■□□□ 1.34
TDP1-216ENST00000556867 IGLV3-19P01714 112 aa23.45■■□□□ 1.34
TDP1-216ENST00000556867 CYP1A2P05177 515 aa23.45■■□□□ 1.34
TDP1-216ENST00000556867 MAPKAPK2P49137 400 aa23.45■■□□□ 1.34
TDP1-216ENST00000556867 ADKP55263 362 aaKnown RBP23.45■■□□□ 1.34
TDP1-216ENST00000556867 KRT83P78385 493 aa23.45■■□□□ 1.34
TDP1-216ENST00000556867 SLC18A3Q16572 532 aa23.45■■□□□ 1.34
TDP1-216ENST00000556867 SPDYCQ5MJ68 293 aa23.45■■□□□ 1.34
TDP1-216ENST00000556867 C9orf64Q5T6V5 341 aa23.45■■□□□ 1.34
TDP1-216ENST00000556867 RWDD4Q6NW29 188 aaKnown RBP23.45■■□□□ 1.34
TDP1-216ENST00000556867 PYROXD2Q8N2H3 581 aa23.45■■□□□ 1.34
TDP1-216ENST00000556867 RSPH9Q9H1X1 276 aaPredicted RBP23.45■■□□□ 1.34
TDP1-216ENST00000556867 PARD6AQ9NPB6 346 aa23.45■■□□□ 1.34
TDP1-216ENST00000556867 GON4LQ3T8J9 2241 aa23.44■■□□□ 1.34
TDP1-216ENST00000556867 A0A0D9SEW6 157 aa23.44■■□□□ 1.34
TDP1-216ENST00000556867 ATP9BO43861 1147 aa23.44■■□□□ 1.34
TDP1-216ENST00000556867 RNF8O76064 485 aa23.44■■□□□ 1.34
TDP1-216ENST00000556867 ZBTB16Q05516 673 aa23.44■■□□□ 1.34
TDP1-216ENST00000556867 GFPT1Q06210 699 aaPredicted RBP23.44■■□□□ 1.34
TDP1-216ENST00000556867 SPEM2Q0P670 501 aa23.44■■□□□ 1.34
TDP1-216ENST00000556867 SEMA3BQ13214 749 aa23.44■■□□□ 1.34
TDP1-216ENST00000556867 ACAP1Q15027 740 aa23.44■■□□□ 1.34
TDP1-216ENST00000556867 ZNF776Q68DI1 518 aaPredicted RBP23.44■■□□□ 1.34
TDP1-216ENST00000556867 CACUL1Q86Y37 369 aa23.44■■□□□ 1.34
TDP1-216ENST00000556867 NCAPGQ9BPX3 1015 aa23.44■■□□□ 1.34
TDP1-216ENST00000556867 ARRDC1-AS1Q9H2J1 176 aa23.44■■□□□ 1.34
TDP1-216ENST00000556867 VPS51Q9UID3 782 aa23.44■■□□□ 1.34
TDP1-216ENST00000556867 HS3ST2Q9Y278 367 aa23.44■■□□□ 1.34
TDP1-216ENST00000556867 EIF3CLB5ME19 914 aaKnown RBP23.43■■□□□ 1.34
TDP1-216ENST00000556867 AKR1B15C9JRZ8 316 aaPredicted RBP23.43■■□□□ 1.34
TDP1-216ENST00000556867 SNAP91O60641 907 aa23.43■■□□□ 1.34
TDP1-216ENST00000556867 LRCH4O75427 683 aa23.43■■□□□ 1.34
TDP1-216ENST00000556867 ACADMP11310 421 aa23.43■■□□□ 1.34
TDP1-216ENST00000556867 CD6P30203 668 aa23.43■■□□□ 1.34
TDP1-216ENST00000556867 TPMTP51580 245 aa23.43■■□□□ 1.34
TDP1-216ENST00000556867 GALCP54803 685 aa23.43■■□□□ 1.34
TDP1-216ENST00000556867 RPS14P62263 151 aaKnown RBP23.43■■□□□ 1.34
TDP1-216ENST00000556867 GNA12Q03113 381 aa23.43■■□□□ 1.34
TDP1-216ENST00000556867 OR7D4Q8NG98 312 aa23.43■■□□□ 1.34
TDP1-216ENST00000556867 FRS2Q8WU20 508 aa23.43■■□□□ 1.34
TDP1-216ENST00000556867 PTPRN2Q92932 1015 aa23.43■■□□□ 1.34
TDP1-216ENST00000556867 ARHGEF26Q96DR7 871 aa23.43■■□□□ 1.34
TDP1-216ENST00000556867 PEBP4Q96S96 227 aa23.43■■□□□ 1.34
TDP1-216ENST00000556867 EIF3CQ99613 913 aaKnown RBP23.43■■□□□ 1.34
TDP1-216ENST00000556867 EPAS1Q99814 870 aa23.43■■□□□ 1.34
TDP1-216ENST00000556867 DEF6Q9H4E7 631 aa23.43■■□□□ 1.34
TDP1-216ENST00000556867 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa23.42■■□□□ 1.34
TDP1-216ENST00000556867 BCLAF3A2AJT9 711 aaKnown RBP23.42■■□□□ 1.34
TDP1-216ENST00000556867 EPHB2P29323 1055 aa23.42■■□□□ 1.34
TDP1-216ENST00000556867 MIPP30301 263 aa23.42■■□□□ 1.34
TDP1-216ENST00000556867 OXTRP30559 389 aa23.42■■□□□ 1.34
TDP1-216ENST00000556867 HTR7P34969 479 aa23.42■■□□□ 1.34
TDP1-216ENST00000556867 PCK1P35558 622 aa23.42■■□□□ 1.34
TDP1-216ENST00000556867 ETFBP38117 255 aa23.42■■□□□ 1.34
TDP1-216ENST00000556867 MPLP40238 635 aa23.42■■□□□ 1.34
TDP1-216ENST00000556867 DHPSP49366 369 aaPredicted RBP23.42■■□□□ 1.34
TDP1-216ENST00000556867 ZNF75DP51815 510 aa23.42■■□□□ 1.34
TDP1-216ENST00000556867 RPL6Q02878 288 aaKnown RBP23.42■■□□□ 1.34
TDP1-216ENST00000556867 CSRP2Q16527 193 aa23.42■■□□□ 1.34
TDP1-216ENST00000556867 CYP4V2Q6ZWL3 525 aaPredicted RBP23.42■■□□□ 1.34
TDP1-216ENST00000556867 PSTKQ8IV42 348 aaKnown RBP23.42■■□□□ 1.34
TDP1-216ENST00000556867 TMEFF1Q8IYR6 380 aa23.42■■□□□ 1.34
TDP1-216ENST00000556867 KIAA2013Q8IYS2 634 aa23.42■■□□□ 1.34
TDP1-216ENST00000556867 SH2D3CQ8N5H7 860 aa23.42■■□□□ 1.34
TDP1-216ENST00000556867 MRFAP1L1Q96HT8 127 aa23.42■■□□□ 1.34
TDP1-216ENST00000556867 CHP1Q99653 195 aa23.42■■□□□ 1.34
TDP1-216ENST00000556867 SNRNP25Q9BV90 132 aaKnown RBP23.42■■□□□ 1.34
TDP1-216ENST00000556867 NUP85Q9BW27 656 aa23.42■■□□□ 1.34
TDP1-216ENST00000556867 SEMA4GQ9NTN9 838 aa23.42■■□□□ 1.34
TDP1-216ENST00000556867 NDFIP2Q9NV92 336 aa23.42■■□□□ 1.34
TDP1-216ENST00000556867 WSB2Q9NYS7 404 aaPredicted RBP23.42■■□□□ 1.34
TDP1-216ENST00000556867 AP4E1Q9UPM8 1137 aa23.42■■□□□ 1.34
TDP1-216ENST00000556867 CEP250Q9BV73 2442 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms