RNA–Protein interactions for RNA: ENST00000556814.5

FCF1-208, Transcript of FCF1, rRNA-processing protein, humanhuman

TSL 4

Gene FCF1, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-208ENST00000556814 SCN4BQ8IWT1 228 aa4.57□□□□□ -1.68
FCF1-208ENST00000556814 VPS52Q8N1B4 723 aa4.57□□□□□ -1.68
FCF1-208ENST00000556814 C16orf52Q8NHV5 167 aa4.57□□□□□ -1.68
FCF1-208ENST00000556814 MPLKIPQ8TAP9 179 aa4.57□□□□□ -1.68
FCF1-208ENST00000556814 FAM110DQ8TAY7 271 aaPredicted RBP4.57□□□□□ -1.68
FCF1-208ENST00000556814 USP13Q92995 863 aaPredicted RBP4.57□□□□□ -1.68
FCF1-208ENST00000556814 SH3KBP1Q96B97 665 aa4.57□□□□□ -1.68
FCF1-208ENST00000556814 UBXN10Q96LJ8 280 aa4.57□□□□□ -1.68
FCF1-208ENST00000556814 HDHD5Q9BXW7 423 aa4.57□□□□□ -1.68
FCF1-208ENST00000556814 RMI1Q9H9A7 625 aa4.57□□□□□ -1.68
FCF1-208ENST00000556814 THAP1Q9NVV9 213 aa4.57□□□□□ -1.68
FCF1-208ENST00000556814 TRNAU1APQ9NX07 287 aaKnown RBP4.57□□□□□ -1.68
FCF1-208ENST00000556814 LAMP3Q9UQV4 416 aa4.57□□□□□ -1.68
FCF1-208ENST00000556814 TRBV5-3A0A0A0MS03 114 aa4.56□□□□□ -1.68
FCF1-208ENST00000556814 WDR91A4D1P6 747 aa4.56□□□□□ -1.68
FCF1-208ENST00000556814 DNAJC9-AS1A6NH13 148 aa4.56□□□□□ -1.68
FCF1-208ENST00000556814 RHODO00212 210 aa4.56□□□□□ -1.68
FCF1-208ENST00000556814 ADAM10O14672 748 aa4.56□□□□□ -1.68
FCF1-208ENST00000556814 SYN3O14994 580 aa4.56□□□□□ -1.68
FCF1-208ENST00000556814 HOXD9P28356 352 aaPredicted RBP4.56□□□□□ -1.68
FCF1-208ENST00000556814 MAPK9P45984 424 aa4.56□□□□□ -1.68
FCF1-208ENST00000556814 RHAGQ02094 409 aa4.56□□□□□ -1.68
FCF1-208ENST00000556814 UBE3AQ05086 875 aa4.56□□□□□ -1.68
FCF1-208ENST00000556814 PLK5Q496M5 336 aa4.56□□□□□ -1.68
FCF1-208ENST00000556814 MIDNQ504T8 468 aa4.56□□□□□ -1.68
FCF1-208ENST00000556814 ARL13AQ5H913 290 aaPredicted RBP4.56□□□□□ -1.68
FCF1-208ENST00000556814 MAP3K21Q5TCX8 1036 aa4.56□□□□□ -1.68
FCF1-208ENST00000556814 SHC4Q6S5L8 630 aa4.56□□□□□ -1.68
FCF1-208ENST00000556814 DDIASQ8IXT1 998 aa4.56□□□□□ -1.68
FCF1-208ENST00000556814 NANOGP1Q8N7R0 232 aa4.56□□□□□ -1.68
FCF1-208ENST00000556814 LINS1Q8NG48 757 aa4.56□□□□□ -1.68
FCF1-208ENST00000556814 NCSTNQ92542 709 aa4.56□□□□□ -1.68
FCF1-208ENST00000556814 CENPIQ92674 756 aaPredicted RBP4.56□□□□□ -1.68
FCF1-208ENST00000556814 ZFYVE19Q96K21 471 aa4.56□□□□□ -1.68
FCF1-208ENST00000556814 TWNKQ96RR1 684 aa4.56□□□□□ -1.68
FCF1-208ENST00000556814 TRMOQ9BU70 441 aa4.56□□□□□ -1.68
FCF1-208ENST00000556814 CADM1Q9BY67 442 aaKnown RBP4.56□□□□□ -1.68
FCF1-208ENST00000556814 SLC29A3Q9BZD2 475 aa4.56□□□□□ -1.68
FCF1-208ENST00000556814 ZNF70Q9UC06 446 aaPredicted RBP4.56□□□□□ -1.68
FCF1-208ENST00000556814 UTS2RQ9UKP6 389 aa4.56□□□□□ -1.68
FCF1-208ENST00000556814 GDAQ9Y2T3 454 aa4.56□□□□□ -1.68
FCF1-208ENST00000556814 CXorf65A6NEN9 183 aa4.55□□□□□ -1.68
FCF1-208ENST00000556814 TLX3O43711 291 aaPredicted RBP4.55□□□□□ -1.68
FCF1-208ENST00000556814 TOP3BO95985 862 aaKnown RBP4.55□□□□□ -1.68
FCF1-208ENST00000556814 CPA1P15085 419 aa4.55□□□□□ -1.68
FCF1-208ENST00000556814 CYP2J2P51589 502 aa4.55□□□□□ -1.68
FCF1-208ENST00000556814 MVDP53602 400 aa4.55□□□□□ -1.68
FCF1-208ENST00000556814 TBL3Q12788 808 aaKnown RBP4.55□□□□□ -1.68
FCF1-208ENST00000556814 SEMA3AQ14563 771 aa4.55□□□□□ -1.68
FCF1-208ENST00000556814 C5orf22Q49AR2 442 aa4.55□□□□□ -1.68
FCF1-208ENST00000556814 ALG10Q5BKT4 473 aa4.55□□□□□ -1.68
FCF1-208ENST00000556814 ALG10BQ5I7T1 473 aa4.55□□□□□ -1.68
FCF1-208ENST00000556814 FAM171A1Q5VUB5 890 aa4.55□□□□□ -1.68
FCF1-208ENST00000556814 ZKSCAN2Q63HK3 967 aa4.55□□□□□ -1.68
FCF1-208ENST00000556814 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.55□□□□□ -1.68
FCF1-208ENST00000556814 LRRTM4Q86VH4 590 aa4.55□□□□□ -1.68
FCF1-208ENST00000556814 BRSK2Q8IWQ3 736 aa4.55□□□□□ -1.68
FCF1-208ENST00000556814 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.55□□□□□ -1.68
FCF1-208ENST00000556814 FAM185AQ8N0U4 392 aa4.55□□□□□ -1.68
FCF1-208ENST00000556814 WIPF2Q8TF74 440 aaPredicted RBP4.55□□□□□ -1.68
FCF1-208ENST00000556814 HERVK_113Q902F9 699 aa4.55□□□□□ -1.68
FCF1-208ENST00000556814 IP6K1Q92551 441 aa4.55□□□□□ -1.68
FCF1-208ENST00000556814 MASTLQ96GX5 879 aa4.55□□□□□ -1.68
FCF1-208ENST00000556814 WDR83Q9BRX9 315 aaKnown RBP4.55□□□□□ -1.68
FCF1-208ENST00000556814 HERC2P3Q9BVR0 1158 aa4.55□□□□□ -1.68
FCF1-208ENST00000556814 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.55□□□□□ -1.68
FCF1-208ENST00000556814 TMEM248Q9NWD8 314 aa4.55□□□□□ -1.68
FCF1-208ENST00000556814 RRN3Q9NYV6 651 aa4.55□□□□□ -1.68
FCF1-208ENST00000556814 FBXO4Q9UKT5 387 aa4.55□□□□□ -1.68
FCF1-208ENST00000556814 GTF2A1LQ9UNN4 478 aa4.55□□□□□ -1.68
FCF1-208ENST00000556814 LRRFIP2Q9Y608 721 aaKnown RBP4.55□□□□□ -1.68
FCF1-208ENST00000556814 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.54□□□□□ -1.68
FCF1-208ENST00000556814 VWA3AA6NCI4 1184 aa4.54□□□□□ -1.68
FCF1-208ENST00000556814 FOXO6A8MYZ6 492 aa4.54□□□□□ -1.68
FCF1-208ENST00000556814 STRNO43815 780 aa4.54□□□□□ -1.68
FCF1-208ENST00000556814 WNT1P04628 370 aa4.54□□□□□ -1.68
FCF1-208ENST00000556814 TMEM191BP0C7N4 346 aa4.54□□□□□ -1.68
FCF1-208ENST00000556814 LYL1P12980 280 aa4.54□□□□□ -1.68
FCF1-208ENST00000556814 ARSAP15289 507 aa4.54□□□□□ -1.68
FCF1-208ENST00000556814 TYK2P29597 1187 aa4.54□□□□□ -1.68
FCF1-208ENST00000556814 AVPR2P30518 371 aa4.54□□□□□ -1.68
FCF1-208ENST00000556814 ARHGAP8P85298 464 aa4.54□□□□□ -1.68
FCF1-208ENST00000556814 TLE2Q04725 743 aa4.54□□□□□ -1.68
FCF1-208ENST00000556814 SRSF1Q07955 248 aaKnown RBP eCLIP4.54□□□□□ -1.68
FCF1-208ENST00000556814 PMPCAQ10713 525 aa4.54□□□□□ -1.68
FCF1-208ENST00000556814 MTX1Q13505 466 aa4.54□□□□□ -1.68
FCF1-208ENST00000556814 BYSLQ13895 437 aaKnown RBP4.54□□□□□ -1.68
FCF1-208ENST00000556814 RBMS2Q15434 407 aaKnown RBP4.54□□□□□ -1.68
FCF1-208ENST00000556814 BBS12Q6ZW61 710 aa4.54□□□□□ -1.68
FCF1-208ENST00000556814 ARFGAP1Q8N6T3 406 aa4.54□□□□□ -1.68
FCF1-208ENST00000556814 C2CD4CQ8TF44 421 aa4.54□□□□□ -1.68
FCF1-208ENST00000556814 FRG2BQ96QU4 278 aa4.54□□□□□ -1.68
FCF1-208ENST00000556814 REEP2Q9BRK0 252 aa4.54□□□□□ -1.68
FCF1-208ENST00000556814 IFT27Q9BW83 186 aa4.54□□□□□ -1.68
FCF1-208ENST00000556814 TASP1Q9H6P5 420 aa4.54□□□□□ -1.68
FCF1-208ENST00000556814 Q9N2J8 555 aa4.54□□□□□ -1.68
FCF1-208ENST00000556814 THSD1Q9NS62 852 aa4.54□□□□□ -1.68
FCF1-208ENST00000556814 RNF146Q9NTX7 359 aa4.54□□□□□ -1.68
FCF1-208ENST00000556814 SAGE1Q9NXZ1 904 aa4.54□□□□□ -1.68
FCF1-208ENST00000556814 CD207Q9UJ71 328 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms