RNA–Protein interactions for RNA: ENST00000556412.4

VIPAS39-208, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-208ENST00000556412 TMEM221A6NGB7 291 aa14.38□□□□□ -0.11
VIPAS39-208ENST00000556412 K7EQS6 105 aa14.38□□□□□ -0.11
VIPAS39-208ENST00000556412 M0R296 226 aa14.38□□□□□ -0.11
VIPAS39-208ENST00000556412 MFSD11O43934 449 aa14.38□□□□□ -0.11
VIPAS39-208ENST00000556412 SNAP91O60641 907 aa14.38□□□□□ -0.11
VIPAS39-208ENST00000556412 CST8O60676 142 aa14.38□□□□□ -0.11
VIPAS39-208ENST00000556412 TIE1P35590 1138 aa14.38□□□□□ -0.11
VIPAS39-208ENST00000556412 DEKP35659 375 aaKnown RBP14.38□□□□□ -0.11
VIPAS39-208ENST00000556412 ETFBP38117 255 aa14.38□□□□□ -0.11
VIPAS39-208ENST00000556412 TFDP2Q14188 446 aa14.38□□□□□ -0.11
VIPAS39-208ENST00000556412 C2orf27AQ580R0 203 aa14.38□□□□□ -0.11
VIPAS39-208ENST00000556412 EMC10Q5UCC4 262 aa14.38□□□□□ -0.11
VIPAS39-208ENST00000556412 TMEM215Q68D42 235 aa14.38□□□□□ -0.11
VIPAS39-208ENST00000556412 ZNF783Q6ZMS7 281 aa14.38□□□□□ -0.11
VIPAS39-208ENST00000556412 VSIG1Q86XK7 387 aa14.38□□□□□ -0.11
VIPAS39-208ENST00000556412 TP53INP2Q8IXH6 220 aa14.38□□□□□ -0.11
VIPAS39-208ENST00000556412 UMODL1-AS1Q8N2C9 162 aa14.38□□□□□ -0.11
VIPAS39-208ENST00000556412 LZTR1Q8N653 840 aa14.38□□□□□ -0.11
VIPAS39-208ENST00000556412 UCMAQ8WVF2 138 aa14.38□□□□□ -0.11
VIPAS39-208ENST00000556412 HAUS1Q96CS2 278 aa14.38□□□□□ -0.11
VIPAS39-208ENST00000556412 WDR24Q96S15 920 aa14.38□□□□□ -0.11
VIPAS39-208ENST00000556412 C2orf49Q9BVC5 232 aaPredicted RBP14.38□□□□□ -0.11
VIPAS39-208ENST00000556412 OSBPL8Q9BZF1 889 aa14.38□□□□□ -0.11
VIPAS39-208ENST00000556412 SLC39A8Q9C0K1 460 aa14.38□□□□□ -0.11
VIPAS39-208ENST00000556412 MAGEH1Q9H213 219 aa14.38□□□□□ -0.11
VIPAS39-208ENST00000556412 NOL6Q9H6R4 1146 aaKnown RBP14.38□□□□□ -0.11
VIPAS39-208ENST00000556412 LMAN1LQ9HAT1 526 aa14.38□□□□□ -0.11
VIPAS39-208ENST00000556412 ELOVL2Q9NXB9 296 aa14.38□□□□□ -0.11
VIPAS39-208ENST00000556412 KIF26AQ9ULI4 1882 aaPredicted RBP14.38□□□□□ -0.11
VIPAS39-208ENST00000556412 ZNF487B1APH4 448 aa14.38□□□□□ -0.11
VIPAS39-208ENST00000556412 RNF40O75150 1001 aa14.38□□□□□ -0.11
VIPAS39-208ENST00000556412 ATP5BP06576 529 aaKnown RBP14.38□□□□□ -0.11
VIPAS39-208ENST00000556412 GLDCP23378 1020 aa14.38□□□□□ -0.11
VIPAS39-208ENST00000556412 CTSOP43234 321 aaPredicted RBP14.38□□□□□ -0.11
VIPAS39-208ENST00000556412 PAPOLAP51003 745 aaKnown RBP14.38□□□□□ -0.11
VIPAS39-208ENST00000556412 NDST2P52849 883 aa14.38□□□□□ -0.11
VIPAS39-208ENST00000556412 COPS2P61201 443 aa14.38□□□□□ -0.11
VIPAS39-208ENST00000556412 GBE1Q04446 702 aa14.38□□□□□ -0.11
VIPAS39-208ENST00000556412 LRRC32Q14392 662 aa14.38□□□□□ -0.11
VIPAS39-208ENST00000556412 DMC1Q14565 340 aa14.38□□□□□ -0.11
VIPAS39-208ENST00000556412 EIF4HQ15056 248 aaKnown RBP14.38□□□□□ -0.11
VIPAS39-208ENST00000556412 PPP2R5EQ16537 467 aa14.38□□□□□ -0.11
VIPAS39-208ENST00000556412 PARP15Q460N3 678 aa14.38□□□□□ -0.11
VIPAS39-208ENST00000556412 LEKR1Q6ZMV7 388 aa14.38□□□□□ -0.11
VIPAS39-208ENST00000556412 UBE2Q2Q8WVN8 375 aa14.38□□□□□ -0.11
VIPAS39-208ENST00000556412 ARHGEF2Q92974 986 aaKnown RBP14.38□□□□□ -0.11
VIPAS39-208ENST00000556412 RPL10LQ96L21 214 aaKnown RBP14.38□□□□□ -0.11
VIPAS39-208ENST00000556412 C16orf45Q96MC5 204 aaPredicted RBP14.38□□□□□ -0.11
VIPAS39-208ENST00000556412 NELL2Q99435 816 aa14.38□□□□□ -0.11
VIPAS39-208ENST00000556412 KLC2Q9H0B6 622 aa14.38□□□□□ -0.11
VIPAS39-208ENST00000556412 EPHX3Q9H6B9 360 aa14.38□□□□□ -0.11
VIPAS39-208ENST00000556412 HPCAL4Q9UM19 191 aa14.38□□□□□ -0.11
VIPAS39-208ENST00000556412 OR51B4Q9Y5P0 310 aa14.38□□□□□ -0.11
VIPAS39-208ENST00000556412 TICRRQ7Z2Z1 1910 aa14.37□□□□□ -0.11
VIPAS39-208ENST00000556412 ARHGAP42A6NI28 874 aa14.37□□□□□ -0.11
VIPAS39-208ENST00000556412 ZFXP17010 805 aaPredicted RBP14.37□□□□□ -0.11
VIPAS39-208ENST00000556412 TNFRSF4P43489 277 aa14.37□□□□□ -0.11
VIPAS39-208ENST00000556412 YBEYP58557 167 aaPredicted RBP14.37□□□□□ -0.11
VIPAS39-208ENST00000556412 ADCY2Q08462 1091 aa14.37□□□□□ -0.11
VIPAS39-208ENST00000556412 CCINQ13939 588 aa14.37□□□□□ -0.11
VIPAS39-208ENST00000556412 EGFLAMQ63HQ2 1017 aa14.37□□□□□ -0.11
VIPAS39-208ENST00000556412 SLC9A4Q6AI14 798 aa14.37□□□□□ -0.11
VIPAS39-208ENST00000556412 NPNTQ6UXI9 565 aa14.37□□□□□ -0.11
VIPAS39-208ENST00000556412 LINGO4Q6UY18 593 aa14.37□□□□□ -0.11
VIPAS39-208ENST00000556412 Q6ZS52 159 aa14.37□□□□□ -0.11
VIPAS39-208ENST00000556412 KIAA0907Q7Z7F0 614 aaPredicted RBP14.37□□□□□ -0.11
VIPAS39-208ENST00000556412 PLD5Q8N7P1 536 aa14.37□□□□□ -0.11
VIPAS39-208ENST00000556412 ZNF513Q8N8E2 541 aaPredicted RBP14.37□□□□□ -0.11
VIPAS39-208ENST00000556412 DCAF4L2Q8NA75 395 aa14.37□□□□□ -0.11
VIPAS39-208ENST00000556412 PJA1Q8NG27 643 aa14.37□□□□□ -0.11
VIPAS39-208ENST00000556412 ALG14Q96F25 216 aa14.37□□□□□ -0.11
VIPAS39-208ENST00000556412 LRRC19Q9H756 370 aa14.37□□□□□ -0.11
VIPAS39-208ENST00000556412 SAE1Q9UBE0 346 aaPredicted RBP14.37□□□□□ -0.11
VIPAS39-208ENST00000556412 VPS51Q9UID3 782 aa14.37□□□□□ -0.11
VIPAS39-208ENST00000556412 PLA2G4CQ9UP65 541 aa14.37□□□□□ -0.11
VIPAS39-208ENST00000556412 SIT1Q9Y3P8 196 aa14.37□□□□□ -0.11
VIPAS39-208ENST00000556412 NCAM2O15394 837 aa14.36□□□□□ -0.11
VIPAS39-208ENST00000556412 TIMM44O43615 452 aa14.36□□□□□ -0.11
VIPAS39-208ENST00000556412 CEP104O60308 925 aa14.36□□□□□ -0.11
VIPAS39-208ENST00000556412 DCNP07585 359 aaKnown RBP14.36□□□□□ -0.11
VIPAS39-208ENST00000556412 DLDP09622 509 aaKnown RBP14.36□□□□□ -0.11
VIPAS39-208ENST00000556412 CHRNB1P11230 501 aa14.36□□□□□ -0.11
VIPAS39-208ENST00000556412 WASP42768 502 aa14.36□□□□□ -0.11
VIPAS39-208ENST00000556412 STK19P49842 368 aaPredicted RBP14.36□□□□□ -0.11
VIPAS39-208ENST00000556412 ECT2LQ008S8 904 aa14.36□□□□□ -0.11
VIPAS39-208ENST00000556412 PAFAH1B3Q15102 231 aaKnown RBP14.36□□□□□ -0.11
VIPAS39-208ENST00000556412 TAZQ16635 292 aa14.36□□□□□ -0.11
VIPAS39-208ENST00000556412 FBXO43Q4G163 708 aa14.36□□□□□ -0.11
VIPAS39-208ENST00000556412 FNDC3BQ53EP0 1204 aaKnown RBP14.36□□□□□ -0.11
VIPAS39-208ENST00000556412 DGKKQ5KSL6 1271 aa14.36□□□□□ -0.11
VIPAS39-208ENST00000556412 ADAT2Q7Z6V5 191 aaKnown RBP14.36□□□□□ -0.11
VIPAS39-208ENST00000556412 ARHGAP12Q8IWW6 846 aa14.36□□□□□ -0.11
VIPAS39-208ENST00000556412 CHPFQ8IZ52 775 aa14.36□□□□□ -0.11
VIPAS39-208ENST00000556412 ATPAF2Q8N5M1 289 aa14.36□□□□□ -0.11
VIPAS39-208ENST00000556412 ERLEC1Q96DZ1 483 aa14.36□□□□□ -0.11
VIPAS39-208ENST00000556412 NAPGQ99747 312 aaPredicted RBP14.36□□□□□ -0.11
VIPAS39-208ENST00000556412 HERPUD2Q9BSE4 406 aa14.36□□□□□ -0.11
VIPAS39-208ENST00000556412 CARD9Q9H257 536 aa14.36□□□□□ -0.11
VIPAS39-208ENST00000556412 SLC25A13Q9UJS0 675 aa14.36□□□□□ -0.11
VIPAS39-208ENST00000556412 COL4A2P08572 1712 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms