RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 C1orf232A0A0U1RR37 186 aa15.29■□□□□ 0.04
ARHGEF40-207ENST00000556399 BCLAF3A2AJT9 711 aaKnown RBP15.29■□□□□ 0.04
ARHGEF40-207ENST00000556399 ERI2A8K979 691 aaKnown RBP15.29■□□□□ 0.04
ARHGEF40-207ENST00000556399 GJB1P08034 283 aa15.29■□□□□ 0.04
ARHGEF40-207ENST00000556399 CTSHP09668 335 aa15.29■□□□□ 0.04
ARHGEF40-207ENST00000556399 YBX3P16989 372 aaKnown RBP eCLIP15.29■□□□□ 0.04
ARHGEF40-207ENST00000556399 SERPINB1P30740 379 aa15.29■□□□□ 0.04
ARHGEF40-207ENST00000556399 C21orf59P57076 290 aa15.29■□□□□ 0.04
ARHGEF40-207ENST00000556399 FRG1Q14331 258 aaKnown RBP15.29■□□□□ 0.04
ARHGEF40-207ENST00000556399 EML3Q32P44 896 aa15.29■□□□□ 0.04
ARHGEF40-207ENST00000556399 DHRSXQ8N5I4 330 aa15.29■□□□□ 0.04
ARHGEF40-207ENST00000556399 CLEC4DQ8WXI8 215 aa15.29■□□□□ 0.04
ARHGEF40-207ENST00000556399 TBL1YQ9BQ87 522 aa15.29■□□□□ 0.04
ARHGEF40-207ENST00000556399 NELFEP18615 380 aaKnown RBP15.29■□□□□ 0.04
ARHGEF40-207ENST00000556399 ATP6V1B2P21281 511 aa15.29■□□□□ 0.04
ARHGEF40-207ENST00000556399 PSMD7P51665 324 aa15.29■□□□□ 0.04
ARHGEF40-207ENST00000556399 MAPK10P53779 464 aa15.29■□□□□ 0.04
ARHGEF40-207ENST00000556399 GAD2Q05329 585 aa15.29■□□□□ 0.04
ARHGEF40-207ENST00000556399 RAD51Q06609 339 aa15.29■□□□□ 0.04
ARHGEF40-207ENST00000556399 ENPEPQ07075 957 aa15.29■□□□□ 0.04
ARHGEF40-207ENST00000556399 LRRC8BQ6P9F7 803 aa15.29■□□□□ 0.04
ARHGEF40-207ENST00000556399 DDX1Q92499 740 aaKnown RBP15.29■□□□□ 0.04
ARHGEF40-207ENST00000556399 SYT15Q9BQS2 421 aa15.29■□□□□ 0.04
ARHGEF40-207ENST00000556399 PAPSS1O43252 624 aaPredicted RBP15.28■□□□□ 0.04
ARHGEF40-207ENST00000556399 MAP3K13O43283 966 aa15.28■□□□□ 0.04
ARHGEF40-207ENST00000556399 NRLP54845 237 aa15.28■□□□□ 0.04
ARHGEF40-207ENST00000556399 CNPY1Q3B7I2 92 aa15.28■□□□□ 0.04
ARHGEF40-207ENST00000556399 SGO1Q5FBB7 561 aa15.28■□□□□ 0.04
ARHGEF40-207ENST00000556399 AMIGO2Q86SJ2 522 aa15.28■□□□□ 0.04
ARHGEF40-207ENST00000556399 CAMK1DQ8IU85 385 aa15.28■□□□□ 0.04
ARHGEF40-207ENST00000556399 CROCCP3Q8IVE0 287 aa15.28■□□□□ 0.04
ARHGEF40-207ENST00000556399 MICU2Q8IYU8 434 aa15.28■□□□□ 0.04
ARHGEF40-207ENST00000556399 ENDOVQ8N8Q3 282 aaKnown RBP15.28■□□□□ 0.04
ARHGEF40-207ENST00000556399 EZH1Q92800 747 aaPredicted RBP15.28■□□□□ 0.04
ARHGEF40-207ENST00000556399 VAT1Q99536 393 aa15.28■□□□□ 0.04
ARHGEF40-207ENST00000556399 OSMRQ99650 979 aa15.28■□□□□ 0.04
ARHGEF40-207ENST00000556399 LDLRP01130 860 aa15.28■□□□□ 0.04
ARHGEF40-207ENST00000556399 MPSTP25325 297 aa15.28■□□□□ 0.04
ARHGEF40-207ENST00000556399 CSE1LP55060 971 aaKnown RBP15.28■□□□□ 0.04
ARHGEF40-207ENST00000556399 INSCQ1MX18 579 aa15.28■□□□□ 0.04
ARHGEF40-207ENST00000556399 PPP1R26Q5T8A7 1209 aaPredicted RBP15.28■□□□□ 0.04
ARHGEF40-207ENST00000556399 TAF2Q6P1X5 1199 aa15.28■□□□□ 0.04
ARHGEF40-207ENST00000556399 RELL1Q8IUW5 271 aa15.28■□□□□ 0.04
ARHGEF40-207ENST00000556399 PRDM16Q9HAZ2 1276 aa15.28■□□□□ 0.04
ARHGEF40-207ENST00000556399 CACYBPQ9HB71 228 aaKnown RBP15.28■□□□□ 0.04
ARHGEF40-207ENST00000556399 MID1IP1Q9NPA3 183 aa15.28■□□□□ 0.04
ARHGEF40-207ENST00000556399 SPAG4Q9NPE6 437 aa15.28■□□□□ 0.04
ARHGEF40-207ENST00000556399 CASS4Q9NQ75 786 aa15.28■□□□□ 0.04
ARHGEF40-207ENST00000556399 RNF19AQ9NV58 838 aa15.28■□□□□ 0.04
ARHGEF40-207ENST00000556399 PLIN3O60664 434 aa15.28■□□□□ 0.04
ARHGEF40-207ENST00000556399 MSS51Q4VC12 460 aa15.28■□□□□ 0.04
ARHGEF40-207ENST00000556399 KIAA1841Q6NSI8 718 aa15.28■□□□□ 0.04
ARHGEF40-207ENST00000556399 ADCY4Q8NFM4 1077 aa15.28■□□□□ 0.04
ARHGEF40-207ENST00000556399 P2RY11Q96G91 374 aa15.28■□□□□ 0.04
ARHGEF40-207ENST00000556399 PPP1R10Q96QC0 940 aaKnown RBP15.28■□□□□ 0.04
ARHGEF40-207ENST00000556399 TUBGCP5Q96RT8 1024 aa15.28■□□□□ 0.04
ARHGEF40-207ENST00000556399 NT5MQ9NPB1 228 aa15.28■□□□□ 0.04
ARHGEF40-207ENST00000556399 FZD1Q9UP38 647 aa15.28■□□□□ 0.04
ARHGEF40-207ENST00000556399 UGT1A9O60656 530 aa15.28■□□□□ 0.04
ARHGEF40-207ENST00000556399 FKBP9O95302 570 aa15.28■□□□□ 0.04
ARHGEF40-207ENST00000556399 CSH1P0DML2 217 aa15.28■□□□□ 0.04
ARHGEF40-207ENST00000556399 CSH2P0DML3 217 aa15.28■□□□□ 0.04
ARHGEF40-207ENST00000556399 XPAP23025 273 aaPredicted RBP15.28■□□□□ 0.04
ARHGEF40-207ENST00000556399 TRMT10BQ6PF06 316 aaKnown RBP15.28■□□□□ 0.04
ARHGEF40-207ENST00000556399 FKBP9P1Q75LS8 142 aa15.28■□□□□ 0.04
ARHGEF40-207ENST00000556399 SATL1Q86VE3 508 aa15.28■□□□□ 0.04
ARHGEF40-207ENST00000556399 ELOVL4Q9GZR5 314 aa15.28■□□□□ 0.04
ARHGEF40-207ENST00000556399 UGT1A7Q9HAW7 530 aa15.28■□□□□ 0.04
ARHGEF40-207ENST00000556399 UGT1A10Q9HAW8 530 aa15.28■□□□□ 0.04
ARHGEF40-207ENST00000556399 UGT1A8Q9HAW9 530 aa15.28■□□□□ 0.04
ARHGEF40-207ENST00000556399 POPDC2Q9HBU9 364 aa15.28■□□□□ 0.04
ARHGEF40-207ENST00000556399 CYLDQ9NQC7 956 aa15.28■□□□□ 0.04
ARHGEF40-207ENST00000556399 WDR70Q9NW82 654 aa15.28■□□□□ 0.04
ARHGEF40-207ENST00000556399 ATP11BQ9Y2G3 1177 aa15.28■□□□□ 0.04
ARHGEF40-207ENST00000556399 NFKB1P19838 968 aa15.27■□□□□ 0.04
ARHGEF40-207ENST00000556399 S100A5P33763 92 aa15.27■□□□□ 0.04
ARHGEF40-207ENST00000556399 NOS2P35228 1153 aa15.27■□□□□ 0.04
ARHGEF40-207ENST00000556399 MOGSQ13724 837 aa15.27■□□□□ 0.04
ARHGEF40-207ENST00000556399 ATP6AP1LQ52LC2 224 aa15.27■□□□□ 0.04
ARHGEF40-207ENST00000556399 MIER2Q8N344 545 aa15.27■□□□□ 0.04
ARHGEF40-207ENST00000556399 WNT8BQ93098 351 aa15.27■□□□□ 0.04
ARHGEF40-207ENST00000556399 NPAS2Q99743 824 aa15.27■□□□□ 0.04
ARHGEF40-207ENST00000556399 LRFN2Q9ULH4 789 aa15.27■□□□□ 0.04
ARHGEF40-207ENST00000556399 GNEQ9Y223 722 aaKnown RBP15.27■□□□□ 0.04
ARHGEF40-207ENST00000556399 RIPK3Q9Y572 518 aa15.27■□□□□ 0.04
ARHGEF40-207ENST00000556399 YDJCA8MPS7 323 aa15.27■□□□□ 0.04
ARHGEF40-207ENST00000556399 H3BRB1 525 aa15.27■□□□□ 0.04
ARHGEF40-207ENST00000556399 B4GALT4O60513 344 aa15.27■□□□□ 0.04
ARHGEF40-207ENST00000556399 SNRPB2P08579 225 aaKnown RBP15.27■□□□□ 0.04
ARHGEF40-207ENST00000556399 OCM2P0CE71 109 aa15.27■□□□□ 0.04
ARHGEF40-207ENST00000556399 OCMP0CE72 109 aaPredicted RBP15.27■□□□□ 0.04
ARHGEF40-207ENST00000556399 MSLNQ13421 630 aaPredicted RBP15.27■□□□□ 0.04
ARHGEF40-207ENST00000556399 TMEM132BQ14DG7 1078 aa15.27■□□□□ 0.04
ARHGEF40-207ENST00000556399 DSELQ8IZU8 1212 aa15.27■□□□□ 0.04
ARHGEF40-207ENST00000556399 OSCP1Q8WVF1 389 aa15.27■□□□□ 0.04
ARHGEF40-207ENST00000556399 BDH2Q9BUT1 245 aa15.27■□□□□ 0.04
ARHGEF40-207ENST00000556399 OSBPL11Q9BXB4 747 aa15.27■□□□□ 0.04
ARHGEF40-207ENST00000556399 B3GNT5Q9BYG0 378 aa15.27■□□□□ 0.04
ARHGEF40-207ENST00000556399 PRKD2Q9BZL6 878 aa15.27■□□□□ 0.04
ARHGEF40-207ENST00000556399 TUT1Q9H6E5 874 aaKnown RBP15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms