RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 EXD3Q8N9H8 876 aa5.61□□□□□ -1.51
PRPF39-209ENST00000556353 OIT3Q8WWZ8 545 aa5.61□□□□□ -1.51
PRPF39-209ENST00000556353 INPP5DQ92835 1189 aa5.61□□□□□ -1.51
PRPF39-209ENST00000556353 ATP2A3Q93084 1043 aa5.61□□□□□ -1.51
PRPF39-209ENST00000556353 MUL1Q969V5 352 aa5.61□□□□□ -1.51
PRPF39-209ENST00000556353 MIB2Q96AX9 1013 aa5.61□□□□□ -1.51
PRPF39-209ENST00000556353 C18orf8Q96DM3 657 aa5.61□□□□□ -1.51
PRPF39-209ENST00000556353 ADAD1Q96M93 576 aaKnown RBP5.61□□□□□ -1.51
PRPF39-209ENST00000556353 PRPF18Q99633 342 aaKnown RBP5.61□□□□□ -1.51
PRPF39-209ENST00000556353 TXNRD2Q9NNW7 524 aa5.61□□□□□ -1.51
PRPF39-209ENST00000556353 TRPC5Q9UL62 973 aaPredicted RBP5.61□□□□□ -1.51
PRPF39-209ENST00000556353 PCDHA7Q9UN72 937 aa5.61□□□□□ -1.51
PRPF39-209ENST00000556353 ZBTB1Q9Y2K1 713 aa5.61□□□□□ -1.51
PRPF39-209ENST00000556353 POLR1AO95602 1720 aaPredicted RBP5.6□□□□□ -1.51
PRPF39-209ENST00000556353 TBC1D3DA0A087WVF3 549 aa5.6□□□□□ -1.51
PRPF39-209ENST00000556353 TBC1D3IA0A087WXS9 549 aa5.6□□□□□ -1.51
PRPF39-209ENST00000556353 TBC1D3EA0A087X179 549 aa5.6□□□□□ -1.51
PRPF39-209ENST00000556353 TBC1D3KA0A087X1G2 549 aa5.6□□□□□ -1.51
PRPF39-209ENST00000556353 TBC1D3BA6NDS4 549 aa5.6□□□□□ -1.51
PRPF39-209ENST00000556353 TBC1D3FA6NER0 549 aaPredicted RBP5.6□□□□□ -1.51
PRPF39-209ENST00000556353 GAGE12JA6NER3 117 aa5.6□□□□□ -1.51
PRPF39-209ENST00000556353 C4orf47A7E2U8 309 aa5.6□□□□□ -1.51
PRPF39-209ENST00000556353 TBC1D3LB9A6J9 549 aa5.6□□□□□ -1.51
PRPF39-209ENST00000556353 MSI1O43347 362 aaKnown RBP5.6□□□□□ -1.51
PRPF39-209ENST00000556353 CAND2O75155 1236 aa5.6□□□□□ -1.51
PRPF39-209ENST00000556353 KRT18P05783 430 aaKnown RBP5.6□□□□□ -1.51
PRPF39-209ENST00000556353 LCKP06239 509 aa5.6□□□□□ -1.51
PRPF39-209ENST00000556353 TBC1D3HP0C7X1 549 aa5.6□□□□□ -1.51
PRPF39-209ENST00000556353 PEPDP12955 493 aa5.6□□□□□ -1.51
PRPF39-209ENST00000556353 MLH1P40692 756 aa5.6□□□□□ -1.51
PRPF39-209ENST00000556353 ALG10Q5BKT4 473 aa5.6□□□□□ -1.51
PRPF39-209ENST00000556353 ALG10BQ5I7T1 473 aa5.6□□□□□ -1.51
PRPF39-209ENST00000556353 TBC1D3GQ6DHY5 549 aa5.6□□□□□ -1.51
PRPF39-209ENST00000556353 TBC1D3CQ6IPX1 549 aa5.6□□□□□ -1.51
PRPF39-209ENST00000556353 ERAP2Q6P179 960 aa5.6□□□□□ -1.51
PRPF39-209ENST00000556353 PARM1Q6UWI2 310 aa5.6□□□□□ -1.51
PRPF39-209ENST00000556353 KDELC2Q7Z4H8 507 aa5.6□□□□□ -1.51
PRPF39-209ENST00000556353 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.6□□□□□ -1.51
PRPF39-209ENST00000556353 TBC1D3Q8IZP1 549 aaPredicted RBP5.6□□□□□ -1.51
PRPF39-209ENST00000556353 TNIP3Q96KP6 325 aa5.6□□□□□ -1.51
PRPF39-209ENST00000556353 CTAGE1Q96RT6 745 aa5.6□□□□□ -1.51
PRPF39-209ENST00000556353 MYD88Q99836 296 aa5.6□□□□□ -1.51
PRPF39-209ENST00000556353 ISCUQ9H1K1 167 aa5.6□□□□□ -1.51
PRPF39-209ENST00000556353 MAP6D1Q9H9H5 199 aa5.6□□□□□ -1.51
PRPF39-209ENST00000556353 SIRT3Q9NTG7 399 aaPredicted RBP5.6□□□□□ -1.51
PRPF39-209ENST00000556353 SELENONQ9NZV5 590 aa5.6□□□□□ -1.51
PRPF39-209ENST00000556353 IGSF9Q9P2J2 1179 aa5.6□□□□□ -1.51
PRPF39-209ENST00000556353 PROCRQ9UNN8 238 aa5.6□□□□□ -1.51
PRPF39-209ENST00000556353 CFAP65Q6ZU64 1925 aaKnown RBP5.6□□□□□ -1.51
PRPF39-209ENST00000556353 LTBP4Q8N2S1 1624 aa5.59□□□□□ -1.51
PRPF39-209ENST00000556353 NOTCH4Q99466 2003 aa5.59□□□□□ -1.51
PRPF39-209ENST00000556353 CYP3A7-CYP3A51PA0A087WV96 503 aa5.59□□□□□ -1.51
PRPF39-209ENST00000556353 NEURL1O76050 574 aa5.59□□□□□ -1.51
PRPF39-209ENST00000556353 KLKB1P03952 638 aa5.59□□□□□ -1.51
PRPF39-209ENST00000556353 CYP3A7P24462 503 aa5.59□□□□□ -1.51
PRPF39-209ENST00000556353 RFX2P48378 723 aa5.59□□□□□ -1.51
PRPF39-209ENST00000556353 RBM6P78332 1123 aaKnown RBP5.59□□□□□ -1.51
PRPF39-209ENST00000556353 Q5PR19 223 aa5.59□□□□□ -1.51
PRPF39-209ENST00000556353 WASHC2DQ5SRD0 308 aa5.59□□□□□ -1.51
PRPF39-209ENST00000556353 IL31Q6EBC2 164 aa5.59□□□□□ -1.51
PRPF39-209ENST00000556353 MDGA2Q7Z553 956 aa5.59□□□□□ -1.51
PRPF39-209ENST00000556353 GATAD2AQ86YP4 633 aa5.59□□□□□ -1.51
PRPF39-209ENST00000556353 GPSM1Q86YR5 675 aa5.59□□□□□ -1.51
PRPF39-209ENST00000556353 IQCF1Q8N6M8 205 aa5.59□□□□□ -1.51
PRPF39-209ENST00000556353 C7orf57Q8NEG2 295 aa5.59□□□□□ -1.51
PRPF39-209ENST00000556353 ZNF419Q96HQ0 510 aaPredicted RBP5.59□□□□□ -1.51
PRPF39-209ENST00000556353 MEIS3Q99687 375 aa5.59□□□□□ -1.51
PRPF39-209ENST00000556353 SLCO5A1Q9H2Y9 848 aa5.59□□□□□ -1.51
PRPF39-209ENST00000556353 IL21RQ9HBE5 538 aa5.59□□□□□ -1.51
PRPF39-209ENST00000556353 HIF1ANQ9NWT6 349 aa5.59□□□□□ -1.51
PRPF39-209ENST00000556353 TBC1D14Q9P2M4 693 aa5.59□□□□□ -1.51
PRPF39-209ENST00000556353 CROCC2H7BZ55 1655 aa5.59□□□□□ -1.52
PRPF39-209ENST00000556353 CEP170BQ9Y4F5 1589 aaPredicted RBP5.59□□□□□ -1.52
PRPF39-209ENST00000556353 MBD5Q9P267 1494 aa5.58□□□□□ -1.52
PRPF39-209ENST00000556353 KIF28PB7ZC32 967 aa5.58□□□□□ -1.52
PRPF39-209ENST00000556353 ABCB4P21439 1286 aa5.58□□□□□ -1.52
PRPF39-209ENST00000556353 STAT1P42224 750 aa5.58□□□□□ -1.52
PRPF39-209ENST00000556353 RNASELQ05823 741 aaKnown RBP5.58□□□□□ -1.52
PRPF39-209ENST00000556353 ENTPD8Q5MY95 495 aa5.58□□□□□ -1.52
PRPF39-209ENST00000556353 SYTL1Q8IYJ3 562 aa5.58□□□□□ -1.52
PRPF39-209ENST00000556353 DEPTORQ8TB45 409 aa5.58□□□□□ -1.52
PRPF39-209ENST00000556353 IP6K1Q92551 441 aa5.58□□□□□ -1.52
PRPF39-209ENST00000556353 TMEM120AQ9BXJ8 343 aa5.58□□□□□ -1.52
PRPF39-209ENST00000556353 TP63Q9H3D4 680 aaPredicted RBP5.58□□□□□ -1.52
PRPF39-209ENST00000556353 PLK2Q9NYY3 685 aa5.58□□□□□ -1.52
PRPF39-209ENST00000556353 INSL5Q9Y5Q6 135 aa5.58□□□□□ -1.52
PRPF39-209ENST00000556353 COPG1Q9Y678 874 aaKnown RBP5.58□□□□□ -1.52
PRPF39-209ENST00000556353 MROH1Q8NDA8 1641 aa5.58□□□□□ -1.52
PRPF39-209ENST00000556353 NEURL4Q96JN8 1562 aa5.58□□□□□ -1.52
PRPF39-209ENST00000556353 CEP162Q5TB80 1403 aa5.57□□□□□ -1.52
PRPF39-209ENST00000556353 CEP152O94986 1710 aa5.57□□□□□ -1.52
PRPF39-209ENST00000556353 CAMSAP1Q5T5Y3 1602 aa5.57□□□□□ -1.52
PRPF39-209ENST00000556353 RNF17Q9BXT8 1623 aaKnown RBP5.57□□□□□ -1.52
PRPF39-209ENST00000556353 EME2A4GXA9 379 aaPredicted RBP5.57□□□□□ -1.52
PRPF39-209ENST00000556353 KCNJ18B7U540 433 aa5.57□□□□□ -1.52
PRPF39-209ENST00000556353 MCIDASD6RGH6 385 aa5.57□□□□□ -1.52
PRPF39-209ENST00000556353 PRSS44E7EML9 344 aa5.57□□□□□ -1.52
PRPF39-209ENST00000556353 DNPH1O43598 174 aa5.57□□□□□ -1.52
PRPF39-209ENST00000556353 MYL1P05976 194 aa5.57□□□□□ -1.52
PRPF39-209ENST00000556353 CPA1P15085 419 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms