RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 ALDH1A2O94788 518 aa9.49□□□□□ -0.89
GTF2A1-204ENST00000556268 PRPF6O94906 941 aaKnown RBP9.49□□□□□ -0.89
GTF2A1-204ENST00000556268 KAT7O95251 611 aa9.49□□□□□ -0.89
GTF2A1-204ENST00000556268 GCNT3O95395 438 aa9.49□□□□□ -0.89
GTF2A1-204ENST00000556268 KRT19P08727 400 aa9.49□□□□□ -0.89
GTF2A1-204ENST00000556268 ARL4AP40617 200 aa9.49□□□□□ -0.89
GTF2A1-204ENST00000556268 PTGER3P43115 390 aa9.49□□□□□ -0.89
GTF2A1-204ENST00000556268 LMAN2Q12907 356 aa9.49□□□□□ -0.89
GTF2A1-204ENST00000556268 TAF10Q12962 218 aa9.49□□□□□ -0.89
GTF2A1-204ENST00000556268 SEMA3BQ13214 749 aa9.49□□□□□ -0.89
GTF2A1-204ENST00000556268 LAPTM5Q13571 262 aa9.49□□□□□ -0.89
GTF2A1-204ENST00000556268 BYSLQ13895 437 aaKnown RBP9.49□□□□□ -0.89
GTF2A1-204ENST00000556268 DPY19L1Q2PZI1 675 aa9.49□□□□□ -0.89
GTF2A1-204ENST00000556268 ANO7Q6IWH7 933 aa9.49□□□□□ -0.89
GTF2A1-204ENST00000556268 LPCAT2Q7L5N7 544 aa9.49□□□□□ -0.89
GTF2A1-204ENST00000556268 TRAPPC11Q7Z392 1133 aa9.49□□□□□ -0.89
GTF2A1-204ENST00000556268 JAMLQ86YT9 394 aa9.49□□□□□ -0.89
GTF2A1-204ENST00000556268 SYT12Q8IV01 421 aa9.49□□□□□ -0.89
GTF2A1-204ENST00000556268 SYCP3Q8IZU3 236 aa9.49□□□□□ -0.89
GTF2A1-204ENST00000556268 ARHGEF39Q8N4T4 335 aa9.49□□□□□ -0.89
GTF2A1-204ENST00000556268 FRMD1Q8N878 549 aa9.49□□□□□ -0.89
GTF2A1-204ENST00000556268 ZNF513Q8N8E2 541 aaPredicted RBP9.49□□□□□ -0.89
GTF2A1-204ENST00000556268 RASSF8Q8NHQ8 419 aa9.49□□□□□ -0.89
GTF2A1-204ENST00000556268 PIGKQ92643 395 aa9.49□□□□□ -0.89
GTF2A1-204ENST00000556268 MYLPFQ96A32 169 aa9.49□□□□□ -0.89
GTF2A1-204ENST00000556268 ANKRD36BP1Q96IX9 119 aa9.49□□□□□ -0.89
GTF2A1-204ENST00000556268 SCNM1Q9BWG6 230 aa9.49□□□□□ -0.89
GTF2A1-204ENST00000556268 TPSD1Q9BZJ3 242 aa9.49□□□□□ -0.89
GTF2A1-204ENST00000556268 PCIF1Q9H4Z3 704 aa9.49□□□□□ -0.89
GTF2A1-204ENST00000556268 TMEM30AQ9NV96 361 aa9.49□□□□□ -0.89
GTF2A1-204ENST00000556268 PANK4Q9NVE7 773 aa9.49□□□□□ -0.89
GTF2A1-204ENST00000556268 PILRBQ9UKJ0 227 aa9.49□□□□□ -0.89
GTF2A1-204ENST00000556268 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.49□□□□□ -0.89
GTF2A1-204ENST00000556268 NUP205Q92621 2012 aa9.49□□□□□ -0.89
GTF2A1-204ENST00000556268 MYO18AQ92614 2054 aaKnown RBP9.49□□□□□ -0.89
GTF2A1-204ENST00000556268 THADAQ6YHU6 1953 aa9.48□□□□□ -0.89
GTF2A1-204ENST00000556268 E2F8A0AVK6 867 aa9.48□□□□□ -0.89
GTF2A1-204ENST00000556268 HRKO00198 91 aa9.48□□□□□ -0.89
GTF2A1-204ENST00000556268 AURKAO14965 403 aa9.48□□□□□ -0.89
GTF2A1-204ENST00000556268 MSL3P1P0C860 447 aa9.48□□□□□ -0.89
GTF2A1-204ENST00000556268 PTPN1P18031 435 aaKnown RBP9.48□□□□□ -0.89
GTF2A1-204ENST00000556268 CFPP27918 469 aa9.48□□□□□ -0.89
GTF2A1-204ENST00000556268 HOXD12P35452 270 aa9.48□□□□□ -0.89
GTF2A1-204ENST00000556268 PI4KAP42356 2102 aa9.48□□□□□ -0.89
GTF2A1-204ENST00000556268 DPP6P42658 865 aa9.48□□□□□ -0.89
GTF2A1-204ENST00000556268 DHPSP49366 369 aaPredicted RBP9.48□□□□□ -0.89
GTF2A1-204ENST00000556268 CACNA2D1P54289 1103 aa9.48□□□□□ -0.89
GTF2A1-204ENST00000556268 PSMC1P62191 440 aaKnown RBP9.48□□□□□ -0.89
GTF2A1-204ENST00000556268 DLG4P78352 724 aa9.48□□□□□ -0.89
GTF2A1-204ENST00000556268 TRIM61Q5EBN2 209 aa9.48□□□□□ -0.89
GTF2A1-204ENST00000556268 EOGTQ5NDL2 527 aa9.48□□□□□ -0.89
GTF2A1-204ENST00000556268 CCDC73Q6ZRK6 1079 aa9.48□□□□□ -0.89
GTF2A1-204ENST00000556268 CBWD2Q8IUF1 395 aa9.48□□□□□ -0.89
GTF2A1-204ENST00000556268 WDR49Q8IV35 697 aa9.48□□□□□ -0.89
GTF2A1-204ENST00000556268 ALLCQ8N6M5 410 aa9.48□□□□□ -0.89
GTF2A1-204ENST00000556268 TXNDC5Q8NBS9 432 aaKnown RBP9.48□□□□□ -0.89
GTF2A1-204ENST00000556268 RLN3Q8WXF3 142 aa9.48□□□□□ -0.89
GTF2A1-204ENST00000556268 OTUB2Q96DC9 234 aa9.48□□□□□ -0.89
GTF2A1-204ENST00000556268 RCC1LQ96I51 464 aaKnown RBP9.48□□□□□ -0.89
GTF2A1-204ENST00000556268 MRPL45Q9BRJ2 306 aaKnown RBP9.48□□□□□ -0.89
GTF2A1-204ENST00000556268 SGPP1Q9BX95 441 aa9.48□□□□□ -0.89
GTF2A1-204ENST00000556268 PANK2Q9BZ23 570 aa9.48□□□□□ -0.89
GTF2A1-204ENST00000556268 KIAA1586Q9HCI6 787 aa9.48□□□□□ -0.89
GTF2A1-204ENST00000556268 TNFRSF12AQ9NP84 129 aa9.48□□□□□ -0.89
GTF2A1-204ENST00000556268 ACTR10Q9NZ32 417 aa9.48□□□□□ -0.89
GTF2A1-204ENST00000556268 TBC1D14Q9P2M4 693 aa9.48□□□□□ -0.89
GTF2A1-204ENST00000556268 MSRB2Q9Y3D2 182 aa9.48□□□□□ -0.89
GTF2A1-204ENST00000556268 NEUROG3Q9Y4Z2 214 aa9.48□□□□□ -0.89
GTF2A1-204ENST00000556268 CPQQ9Y646 472 aa9.48□□□□□ -0.89
GTF2A1-204ENST00000556268 PTPRDP23468 1912 aa9.48□□□□□ -0.89
GTF2A1-204ENST00000556268 BAHCC1Q9P281 2608 aa9.48□□□□□ -0.89
GTF2A1-204ENST00000556268 AKAP13Q12802 2813 aa9.47□□□□□ -0.89
GTF2A1-204ENST00000556268 TCHHQ07283 1943 aa9.47□□□□□ -0.89
GTF2A1-204ENST00000556268 A0A087X0B3 334 aa9.47□□□□□ -0.89
GTF2A1-204ENST00000556268 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.47□□□□□ -0.89
GTF2A1-204ENST00000556268 FAM92AA1XBS5 289 aa9.47□□□□□ -0.89
GTF2A1-204ENST00000556268 SRRM3A6NNA2 597 aaPredicted RBP9.47□□□□□ -0.89
GTF2A1-204ENST00000556268 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.47□□□□□ -0.89
GTF2A1-204ENST00000556268 F8VP50 259 aa9.47□□□□□ -0.89
GTF2A1-204ENST00000556268 TGFB1I1O43294 461 aa9.47□□□□□ -0.89
GTF2A1-204ENST00000556268 KLF8O95600 359 aaPredicted RBP9.47□□□□□ -0.89
GTF2A1-204ENST00000556268 TNNC2P02585 160 aa9.47□□□□□ -0.89
GTF2A1-204ENST00000556268 APODP05090 189 aa9.47□□□□□ -0.89
GTF2A1-204ENST00000556268 TMEM191BP0C7N4 346 aa9.47□□□□□ -0.89
GTF2A1-204ENST00000556268 ZDHHC11BP0C7U3 371 aa9.47□□□□□ -0.89
GTF2A1-204ENST00000556268 IDEP14735 1019 aa9.47□□□□□ -0.89
GTF2A1-204ENST00000556268 YWHAQP27348 245 aa9.47□□□□□ -0.89
GTF2A1-204ENST00000556268 SRSF3P84103 164 aaKnown RBP9.47□□□□□ -0.89
GTF2A1-204ENST00000556268 MVKQ03426 396 aa9.47□□□□□ -0.89
GTF2A1-204ENST00000556268 CUL4AQ13619 759 aa9.47□□□□□ -0.89
GTF2A1-204ENST00000556268 SLC39A14Q15043 492 aa9.47□□□□□ -0.89
GTF2A1-204ENST00000556268 LMBRD2Q68DH5 695 aaPredicted RBP9.47□□□□□ -0.89
GTF2A1-204ENST00000556268 CNNM4Q6P4Q7 775 aa9.47□□□□□ -0.89
GTF2A1-204ENST00000556268 PAQR9Q6ZVX9 377 aa9.47□□□□□ -0.89
GTF2A1-204ENST00000556268 EPM2AIP1Q7L775 607 aaPredicted RBP9.47□□□□□ -0.89
GTF2A1-204ENST00000556268 C1QL4Q86Z23 238 aa9.47□□□□□ -0.89
GTF2A1-204ENST00000556268 LRRC56Q8IYG6 542 aaPredicted RBP9.47□□□□□ -0.89
GTF2A1-204ENST00000556268 TMEFF1Q8IYR6 380 aa9.47□□□□□ -0.89
GTF2A1-204ENST00000556268 NUP93Q8N1F7 819 aa9.47□□□□□ -0.89
GTF2A1-204ENST00000556268 DEFB124Q8NES8 71 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms