RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 C19orf18Q8NEA5 215 aa10.9□□□□□ -0.66
ACTN1-216ENST00000556083 RIT1Q92963 219 aa10.9□□□□□ -0.66
ACTN1-216ENST00000556083 TMEM120AQ9BXJ8 343 aa10.9□□□□□ -0.66
ACTN1-216ENST00000556083 UBIAD1Q9Y5Z9 338 aa10.9□□□□□ -0.66
ACTN1-216ENST00000556083 DEPDC5O75140 1603 aa10.9□□□□□ -0.66
ACTN1-216ENST00000556083 ROBO3Q96MS0 1386 aa10.9□□□□□ -0.66
ACTN1-216ENST00000556083 DDTLA6NHG4 134 aaPredicted RBP10.9□□□□□ -0.66
ACTN1-216ENST00000556083 C2CD2LO14523 706 aa10.9□□□□□ -0.66
ACTN1-216ENST00000556083 EPN2O95208 641 aa10.9□□□□□ -0.66
ACTN1-216ENST00000556083 NPR3P17342 541 aa10.9□□□□□ -0.66
ACTN1-216ENST00000556083 TNNI3P19429 210 aa10.9□□□□□ -0.66
ACTN1-216ENST00000556083 SLC1A6P48664 564 aa10.9□□□□□ -0.66
ACTN1-216ENST00000556083 CRYBB1P53674 252 aaPredicted RBP10.9□□□□□ -0.66
ACTN1-216ENST00000556083 COPZ1P61923 177 aa10.9□□□□□ -0.66
ACTN1-216ENST00000556083 VAC14Q08AM6 782 aa10.9□□□□□ -0.66
ACTN1-216ENST00000556083 BNIP2Q12982 314 aa10.9□□□□□ -0.66
ACTN1-216ENST00000556083 RCN1Q15293 331 aa10.9□□□□□ -0.66
ACTN1-216ENST00000556083 AGKQ53H12 422 aa10.9□□□□□ -0.66
ACTN1-216ENST00000556083 INTS6LQ5JSJ4 861 aaKnown RBP10.9□□□□□ -0.66
ACTN1-216ENST00000556083 NEPROQ6NW34 567 aa10.9□□□□□ -0.66
ACTN1-216ENST00000556083 PHF13Q86YI8 300 aaPredicted RBP10.9□□□□□ -0.66
ACTN1-216ENST00000556083 SPPL2BQ8TCT7 592 aa10.9□□□□□ -0.66
ACTN1-216ENST00000556083 KLF6Q99612 283 aaPredicted RBP10.9□□□□□ -0.66
ACTN1-216ENST00000556083 APBA2Q99767 749 aa10.9□□□□□ -0.66
ACTN1-216ENST00000556083 ATXN3LQ9H3M9 355 aa10.9□□□□□ -0.66
ACTN1-216ENST00000556083 SETD4Q9NVD3 440 aa10.9□□□□□ -0.66
ACTN1-216ENST00000556083 SH3BP4Q9P0V3 963 aa10.9□□□□□ -0.66
ACTN1-216ENST00000556083 PCDHA11Q9Y5I1 949 aa10.9□□□□□ -0.66
ACTN1-216ENST00000556083 SNX13Q9Y5W8 968 aa10.9□□□□□ -0.66
ACTN1-216ENST00000556083 CCDC154A6NI56 674 aa10.9□□□□□ -0.66
ACTN1-216ENST00000556083 SLC28A1O00337 649 aa10.9□□□□□ -0.66
ACTN1-216ENST00000556083 XPO1O14980 1071 aaKnown RBP10.9□□□□□ -0.66
ACTN1-216ENST00000556083 BIRC5O15392 142 aa10.9□□□□□ -0.66
ACTN1-216ENST00000556083 LGALS2P05162 132 aa10.9□□□□□ -0.66
ACTN1-216ENST00000556083 PCNAP12004 261 aa10.9□□□□□ -0.66
ACTN1-216ENST00000556083 TFE3P19532 575 aaPredicted RBP10.9□□□□□ -0.66
ACTN1-216ENST00000556083 HTR1BP28222 390 aa10.9□□□□□ -0.66
ACTN1-216ENST00000556083 SLC16A1P53985 500 aa10.9□□□□□ -0.66
ACTN1-216ENST00000556083 PMS1P54277 932 aaKnown RBP10.9□□□□□ -0.66
ACTN1-216ENST00000556083 MARSP56192 900 aaKnown RBP10.9□□□□□ -0.66
ACTN1-216ENST00000556083 BMT2Q1RMZ1 405 aa10.9□□□□□ -0.66
ACTN1-216ENST00000556083 GALNTL6Q49A17 601 aa10.9□□□□□ -0.66
ACTN1-216ENST00000556083 STRADAQ7RTN6 431 aa10.9□□□□□ -0.66
ACTN1-216ENST00000556083 KRT74Q7RTS7 529 aa10.9□□□□□ -0.66
ACTN1-216ENST00000556083 DEPDC4Q8N2C3 294 aa10.9□□□□□ -0.66
ACTN1-216ENST00000556083 ANKRD52Q8NB46 1076 aa10.9□□□□□ -0.66
ACTN1-216ENST00000556083 B3GALNT2Q8NCR0 500 aa10.9□□□□□ -0.66
ACTN1-216ENST00000556083 TRIM63Q969Q1 353 aa10.9□□□□□ -0.66
ACTN1-216ENST00000556083 SGF29Q96ES7 293 aa10.9□□□□□ -0.66
ACTN1-216ENST00000556083 SENP8Q96LD8 212 aa10.9□□□□□ -0.66
ACTN1-216ENST00000556083 TMEM121Q9BTD3 319 aa10.9□□□□□ -0.66
ACTN1-216ENST00000556083 CATSPERZQ9NTU4 200 aa10.9□□□□□ -0.66
ACTN1-216ENST00000556083 TBC1D14Q9P2M4 693 aa10.9□□□□□ -0.66
ACTN1-216ENST00000556083 NAALADL1Q9UQQ1 740 aa10.9□□□□□ -0.66
ACTN1-216ENST00000556083 MRPS33Q9Y291 106 aaKnown RBP10.9□□□□□ -0.66
ACTN1-216ENST00000556083 LRCH1Q9Y2L9 728 aa10.9□□□□□ -0.66
ACTN1-216ENST00000556083 GSTK1Q9Y2Q3 226 aa10.9□□□□□ -0.66
ACTN1-216ENST00000556083 RPTORQ8N122 1335 aa10.9□□□□□ -0.67
ACTN1-216ENST00000556083 A0A087WXM4 84 aa10.9□□□□□ -0.67
ACTN1-216ENST00000556083 ANKDD1BA6NHY2 528 aa10.9□□□□□ -0.67
ACTN1-216ENST00000556083 TRAFD1O14545 582 aaPredicted RBP10.9□□□□□ -0.67
ACTN1-216ENST00000556083 CLPTM1O96005 669 aa10.9□□□□□ -0.67
ACTN1-216ENST00000556083 LTA4HP09960 611 aaKnown RBP10.9□□□□□ -0.67
ACTN1-216ENST00000556083 ETS1P14921 441 aa10.9□□□□□ -0.67
ACTN1-216ENST00000556083 PTPN1P18031 435 aaKnown RBP10.9□□□□□ -0.67
ACTN1-216ENST00000556083 ATP5F1P24539 256 aaPredicted RBP10.9□□□□□ -0.67
ACTN1-216ENST00000556083 PNLIPRP1P54315 467 aa10.9□□□□□ -0.67
ACTN1-216ENST00000556083 SHROOM1Q2M3G4 852 aaPredicted RBP10.9□□□□□ -0.67
ACTN1-216ENST00000556083 KCNT1Q5JUK3 1230 aa10.9□□□□□ -0.67
ACTN1-216ENST00000556083 TBCELQ5QJ74 424 aa10.9□□□□□ -0.67
ACTN1-216ENST00000556083 MFSD4BQ5TF39 518 aa10.9□□□□□ -0.67
ACTN1-216ENST00000556083 FBXL19Q6PCT2 694 aa10.9□□□□□ -0.67
ACTN1-216ENST00000556083 GPSM1Q86YR5 675 aa10.9□□□□□ -0.67
ACTN1-216ENST00000556083 DEFB106AQ8N104 65 aa10.9□□□□□ -0.67
ACTN1-216ENST00000556083 MTERF3Q96E29 417 aa10.9□□□□□ -0.67
ACTN1-216ENST00000556083 FAM192AQ9GZU8 254 aa10.9□□□□□ -0.67
ACTN1-216ENST00000556083 RIBC2Q9H4K1 309 aa10.9□□□□□ -0.67
ACTN1-216ENST00000556083 KCNMB3Q9NPA1 279 aa10.9□□□□□ -0.67
ACTN1-216ENST00000556083 MRTO4Q9UKD2 239 aaKnown RBP10.9□□□□□ -0.67
ACTN1-216ENST00000556083 SETD1BQ9UPS6 1966 aaKnown RBP10.89□□□□□ -0.67
ACTN1-216ENST00000556083 BCLAF3A2AJT9 711 aaKnown RBP10.89□□□□□ -0.67
ACTN1-216ENST00000556083 NR5A2O00482 541 aa10.89□□□□□ -0.67
ACTN1-216ENST00000556083 ATXN8OSP0DMR3 200 aa10.89□□□□□ -0.67
ACTN1-216ENST00000556083 CCNA2P20248 432 aa10.89□□□□□ -0.67
ACTN1-216ENST00000556083 PGS1Q32NB8 556 aa10.89□□□□□ -0.67
ACTN1-216ENST00000556083 GJB7Q6PEY0 223 aa10.89□□□□□ -0.67
ACTN1-216ENST00000556083 SLC47A2Q86VL8 602 aa10.89□□□□□ -0.67
ACTN1-216ENST00000556083 WDR36Q8NI36 951 aaKnown RBP10.89□□□□□ -0.67
ACTN1-216ENST00000556083 SH3GL2Q99962 352 aa10.89□□□□□ -0.67
ACTN1-216ENST00000556083 INTS7Q9NVH2 962 aaKnown RBP10.89□□□□□ -0.67
ACTN1-216ENST00000556083 UBP1Q9NZI7 540 aa10.89□□□□□ -0.67
ACTN1-216ENST00000556083 TRPC4Q9UBN4 977 aa10.89□□□□□ -0.67
ACTN1-216ENST00000556083 TRIM10Q9UDY6 481 aa10.89□□□□□ -0.67
ACTN1-216ENST00000556083 PCYOX1Q9UHG3 505 aa10.89□□□□□ -0.67
ACTN1-216ENST00000556083 CAPN6Q9Y6Q1 641 aa10.89□□□□□ -0.67
ACTN1-216ENST00000556083 WNT10BO00744 389 aa10.89□□□□□ -0.67
ACTN1-216ENST00000556083 TEX28O15482 410 aa10.89□□□□□ -0.67
ACTN1-216ENST00000556083 FGF1P05230 155 aa10.89□□□□□ -0.67
ACTN1-216ENST00000556083 ELK3P41970 407 aa10.89□□□□□ -0.67
ACTN1-216ENST00000556083 MRPS6P82932 125 aaKnown RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms