RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 TBC1D3HP0C7X1 549 aa3.76□□□□□ -1.81
SRP54-209ENST00000555746 STAT6P42226 847 aa3.76□□□□□ -1.81
SRP54-209ENST00000555746 RCAN1P53805 252 aa3.76□□□□□ -1.81
SRP54-209ENST00000555746 PROK1P58294 105 aa3.76□□□□□ -1.81
SRP54-209ENST00000555746 TUBA4AP68366 448 aa3.76□□□□□ -1.81
SRP54-209ENST00000555746 DMWDQ09019 674 aa3.76□□□□□ -1.81
SRP54-209ENST00000555746 SLC14A1Q13336 389 aa3.76□□□□□ -1.81
SRP54-209ENST00000555746 CERKLQ49MI3 558 aaPredicted RBP3.76□□□□□ -1.81
SRP54-209ENST00000555746 ANKRD45Q5TZF3 282 aa3.76□□□□□ -1.81
SRP54-209ENST00000555746 PRAMEF17Q5VTA0 474 aa3.76□□□□□ -1.81
SRP54-209ENST00000555746 TBC1D3GQ6DHY5 549 aa3.76□□□□□ -1.81
SRP54-209ENST00000555746 TBC1D3CQ6IPX1 549 aa3.76□□□□□ -1.81
SRP54-209ENST00000555746 FBXO42Q6P3S6 717 aa3.76□□□□□ -1.81
SRP54-209ENST00000555746 RANBP10Q6VN20 620 aa3.76□□□□□ -1.81
SRP54-209ENST00000555746 SYT13Q7L8C5 426 aa3.76□□□□□ -1.81
SRP54-209ENST00000555746 C2CD5Q86YS7 1000 aa3.76□□□□□ -1.81
SRP54-209ENST00000555746 TBC1D3Q8IZP1 549 aaPredicted RBP3.76□□□□□ -1.81
SRP54-209ENST00000555746 ADPRHL1Q8NDY3 354 aa3.76□□□□□ -1.81
SRP54-209ENST00000555746 SRFBP1Q8NEF9 429 aaKnown RBP3.76□□□□□ -1.81
SRP54-209ENST00000555746 SEMA6DQ8NFY4 1073 aa3.76□□□□□ -1.81
SRP54-209ENST00000555746 HERVK_113Q902F9 699 aa3.76□□□□□ -1.81
SRP54-209ENST00000555746 GOLGA1Q92805 767 aa3.76□□□□□ -1.81
SRP54-209ENST00000555746 NELL1Q92832 810 aa3.76□□□□□ -1.81
SRP54-209ENST00000555746 KTI12Q96EK9 354 aaPredicted RBP3.76□□□□□ -1.81
SRP54-209ENST00000555746 PIGSQ96S52 555 aa3.76□□□□□ -1.81
SRP54-209ENST00000555746 SENP7Q9BQF6 1050 aa3.76□□□□□ -1.81
SRP54-209ENST00000555746 NUAK2Q9H093 628 aa3.76□□□□□ -1.81
SRP54-209ENST00000555746 R3HDMLQ9H3Y0 253 aa3.76□□□□□ -1.81
SRP54-209ENST00000555746 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.76□□□□□ -1.81
SRP54-209ENST00000555746 BAG5Q9UL15 447 aa3.76□□□□□ -1.81
SRP54-209ENST00000555746 MAFFQ9ULX9 164 aa3.76□□□□□ -1.81
SRP54-209ENST00000555746 GTF2A1LQ9UNN4 478 aa3.76□□□□□ -1.81
SRP54-209ENST00000555746 B3GNT3Q9Y2A9 372 aa3.76□□□□□ -1.81
SRP54-209ENST00000555746 DERAQ9Y315 318 aa3.76□□□□□ -1.81
SRP54-209ENST00000555746 PCDHA10Q9Y5I2 948 aa3.76□□□□□ -1.81
SRP54-209ENST00000555746 LRRFIP2Q9Y608 721 aaKnown RBP3.76□□□□□ -1.81
SRP54-209ENST00000555746 COX11Q9Y6N1 276 aa3.76□□□□□ -1.81
SRP54-209ENST00000555746 PIEZO1Q92508 2521 aa3.76□□□□□ -1.81
SRP54-209ENST00000555746 NALCNQ8IZF0 1738 aa3.75□□□□□ -1.81
SRP54-209ENST00000555746 TRPM2O94759 1503 aa3.75□□□□□ -1.81
SRP54-209ENST00000555746 NPHP3Q7Z494 1330 aa3.75□□□□□ -1.81
SRP54-209ENST00000555746 CLSPNQ9HAW4 1339 aa3.75□□□□□ -1.81
SRP54-209ENST00000555746 FYCO1Q9BQS8 1478 aa3.75□□□□□ -1.81
SRP54-209ENST00000555746 CICQ96RK0 1608 aaPredicted RBP3.75□□□□□ -1.81
SRP54-209ENST00000555746 AGAP5A6NIR3 686 aa3.75□□□□□ -1.81
SRP54-209ENST00000555746 SAC3D1A6NKF1 404 aa3.75□□□□□ -1.81
SRP54-209ENST00000555746 LINC01548A6NM66 108 aa3.75□□□□□ -1.81
SRP54-209ENST00000555746 PRRT4C9JH25 899 aa3.75□□□□□ -1.81
SRP54-209ENST00000555746 TMEM232C9JQI7 657 aa3.75□□□□□ -1.81
SRP54-209ENST00000555746 LATS1O95835 1130 aa3.75□□□□□ -1.81
SRP54-209ENST00000555746 NUDT3O95989 172 aa3.75□□□□□ -1.81
SRP54-209ENST00000555746 ENO1P06733 434 aaKnown RBP3.75□□□□□ -1.81
SRP54-209ENST00000555746 SLC3A2P08195 630 aaKnown RBP3.75□□□□□ -1.81
SRP54-209ENST00000555746 CYP2D6P10635 497 aa3.75□□□□□ -1.81
SRP54-209ENST00000555746 CYP2A6P11509 494 aaPredicted RBP3.75□□□□□ -1.81
SRP54-209ENST00000555746 CKMT1AP12532 417 aa3.75□□□□□ -1.81
SRP54-209ENST00000555746 PCP4P48539 62 aa3.75□□□□□ -1.81
SRP54-209ENST00000555746 RNASELQ05823 741 aaKnown RBP3.75□□□□□ -1.81
SRP54-209ENST00000555746 GLE1Q53GS7 698 aaKnown RBP3.75□□□□□ -1.81
SRP54-209ENST00000555746 ZNF813Q6ZN06 617 aa3.75□□□□□ -1.81
SRP54-209ENST00000555746 ZNF788Q6ZQV5 615 aa3.75□□□□□ -1.81
SRP54-209ENST00000555746 BBS12Q6ZW61 710 aa3.75□□□□□ -1.81
SRP54-209ENST00000555746 PTF1AQ7RTS3 328 aa3.75□□□□□ -1.81
SRP54-209ENST00000555746 LRRTM4Q86VH4 590 aa3.75□□□□□ -1.81
SRP54-209ENST00000555746 RFX6Q8HWS3 928 aa3.75□□□□□ -1.81
SRP54-209ENST00000555746 TMEM57Q8N5G2 664 aa3.75□□□□□ -1.81
SRP54-209ENST00000555746 EXD3Q8N9H8 876 aa3.75□□□□□ -1.81
SRP54-209ENST00000555746 USP38Q8NB14 1042 aa3.75□□□□□ -1.81
SRP54-209ENST00000555746 HASPINQ8TF76 798 aa3.75□□□□□ -1.81
SRP54-209ENST00000555746 USP13Q92995 863 aaPredicted RBP3.75□□□□□ -1.81
SRP54-209ENST00000555746 TBATAQ96M53 351 aa3.75□□□□□ -1.81
SRP54-209ENST00000555746 ASB2Q96Q27 587 aa3.75□□□□□ -1.81
SRP54-209ENST00000555746 TWNKQ96RR1 684 aa3.75□□□□□ -1.81
SRP54-209ENST00000555746 HTATIP2Q9BUP3 242 aa3.75□□□□□ -1.81
SRP54-209ENST00000555746 RIOX1Q9H6W3 641 aa3.75□□□□□ -1.81
SRP54-209ENST00000555746 SFXN1Q9H9B4 322 aa3.75□□□□□ -1.81
SRP54-209ENST00000555746 CHODLQ9H9P2 273 aa3.75□□□□□ -1.81
SRP54-209ENST00000555746 NOD2Q9HC29 1040 aa3.75□□□□□ -1.81
SRP54-209ENST00000555746 PDE11AQ9HCR9 933 aa3.75□□□□□ -1.81
SRP54-209ENST00000555746 SLC22A11Q9NSA0 550 aa3.75□□□□□ -1.81
SRP54-209ENST00000555746 ASNSD1Q9NWL6 643 aa3.75□□□□□ -1.81
SRP54-209ENST00000555746 RRN3Q9NYV6 651 aa3.75□□□□□ -1.81
SRP54-209ENST00000555746 PDP2Q9P2J9 529 aa3.75□□□□□ -1.81
SRP54-209ENST00000555746 PI4KBQ9UBF8 816 aa3.75□□□□□ -1.81
SRP54-209ENST00000555746 RCE1Q9Y256 329 aa3.75□□□□□ -1.81
SRP54-209ENST00000555746 COPG1Q9Y678 874 aaKnown RBP3.75□□□□□ -1.81
SRP54-209ENST00000555746 TROQ12816 1431 aaPredicted RBP3.75□□□□□ -1.81
SRP54-209ENST00000555746 KIAA1107Q9UPP5 1409 aa3.75□□□□□ -1.81
SRP54-209ENST00000555746 CDC42BPAQ5VT25 1732 aa3.75□□□□□ -1.81
SRP54-209ENST00000555746 ADGRL2O95490 1459 aa3.74□□□□□ -1.81
SRP54-209ENST00000555746 PLEKHH2Q8IVE3 1493 aa3.74□□□□□ -1.81
SRP54-209ENST00000555746 PXDNQ92626 1479 aa3.74□□□□□ -1.81
SRP54-209ENST00000555746 WIPF3A6NGB9 483 aa3.74□□□□□ -1.81
SRP54-209ENST00000555746 SMIM22K7EJ46 135 aa3.74□□□□□ -1.81
SRP54-209ENST00000555746 NPHP1O15259 732 aa3.74□□□□□ -1.81
SRP54-209ENST00000555746 SEPT4O43236 478 aa3.74□□□□□ -1.81
SRP54-209ENST00000555746 KRT38O76015 456 aa3.74□□□□□ -1.81
SRP54-209ENST00000555746 RFPL3SP0C7P2 107 aa3.74□□□□□ -1.81
SRP54-209ENST00000555746 CHN1P15882 459 aa3.74□□□□□ -1.81
SRP54-209ENST00000555746 BMP5P22003 454 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms