RNA–Protein interactions for RNA: ENST00000555709.6

MTHFD1-211, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-211ENST00000555709 VITQ6UXI7 678 aa12.09□□□□□ -0.47
MTHFD1-211ENST00000555709 DDX42Q86XP3 938 aaKnown RBP eCLIP12.09□□□□□ -0.47
MTHFD1-211ENST00000555709 UNC45BQ8IWX7 931 aa12.09□□□□□ -0.47
MTHFD1-211ENST00000555709 FAM217AQ8IXS0 508 aa12.09□□□□□ -0.47
MTHFD1-211ENST00000555709 ZNF683Q8IZ20 524 aa12.09□□□□□ -0.47
MTHFD1-211ENST00000555709 PYROXD2Q8N2H3 581 aa12.09□□□□□ -0.47
MTHFD1-211ENST00000555709 ATP6V0D2Q8N8Y2 350 aa12.09□□□□□ -0.47
MTHFD1-211ENST00000555709 KIF18AQ8NI77 898 aa12.09□□□□□ -0.47
MTHFD1-211ENST00000555709 ZSCAN18Q8TBC5 510 aaPredicted RBP12.09□□□□□ -0.47
MTHFD1-211ENST00000555709 SH3RF2Q8TEC5 729 aa12.09□□□□□ -0.47
MTHFD1-211ENST00000555709 COG1Q8WTW3 980 aa12.09□□□□□ -0.47
MTHFD1-211ENST00000555709 AZIN2Q96A70 460 aa12.09□□□□□ -0.47
MTHFD1-211ENST00000555709 FAF2Q96CS3 445 aa12.09□□□□□ -0.47
MTHFD1-211ENST00000555709 RBM41Q96IZ5 413 aaKnown RBP12.09□□□□□ -0.47
MTHFD1-211ENST00000555709 ASB16Q96NS5 453 aa12.09□□□□□ -0.47
MTHFD1-211ENST00000555709 PRMT1Q99873 361 aaKnown RBP12.09□□□□□ -0.47
MTHFD1-211ENST00000555709 ZNF670Q9BS34 389 aa12.09□□□□□ -0.47
MTHFD1-211ENST00000555709 OSBPL2Q9H1P3 480 aa12.09□□□□□ -0.47
MTHFD1-211ENST00000555709 DHX35Q9H5Z1 703 aaKnown RBP12.09□□□□□ -0.47
MTHFD1-211ENST00000555709 KIF9Q9HAQ2 790 aa12.09□□□□□ -0.47
MTHFD1-211ENST00000555709 TRPV4Q9HBA0 871 aa12.09□□□□□ -0.47
MTHFD1-211ENST00000555709 TDP1Q9NUW8 608 aa12.09□□□□□ -0.47
MTHFD1-211ENST00000555709 CFAP97Q9P2B7 532 aa12.09□□□□□ -0.47
MTHFD1-211ENST00000555709 RCOR3Q9P2K3 495 aaPredicted RBP12.09□□□□□ -0.47
MTHFD1-211ENST00000555709 STOML2Q9UJZ1 356 aa12.09□□□□□ -0.47
MTHFD1-211ENST00000555709 SNX10Q9Y5X0 201 aa12.09□□□□□ -0.47
MTHFD1-211ENST00000555709 HS3ST4Q9Y661 456 aa12.09□□□□□ -0.47
MTHFD1-211ENST00000555709 HECTD1Q9ULT8 2610 aa12.08□□□□□ -0.47
MTHFD1-211ENST00000555709 ZNF487B1APH4 448 aa12.08□□□□□ -0.48
MTHFD1-211ENST00000555709 FAM72CH0Y354 149 aa12.08□□□□□ -0.48
MTHFD1-211ENST00000555709 GFRA2O00451 464 aa12.08□□□□□ -0.48
MTHFD1-211ENST00000555709 CDX4O14627 284 aaPredicted RBP12.08□□□□□ -0.48
MTHFD1-211ENST00000555709 ACSL4O60488 711 aa12.08□□□□□ -0.48
MTHFD1-211ENST00000555709 SRGAP2O75044 1071 aa12.08□□□□□ -0.48
MTHFD1-211ENST00000555709 ZRANB2O95218 330 aaKnown RBP eCLIP12.08□□□□□ -0.48
MTHFD1-211ENST00000555709 KDELR1P24390 212 aa12.08□□□□□ -0.48
MTHFD1-211ENST00000555709 IL4RP24394 825 aa12.08□□□□□ -0.48
MTHFD1-211ENST00000555709 GGCXP38435 758 aa12.08□□□□□ -0.48
MTHFD1-211ENST00000555709 PXNP49023 591 aaPredicted RBP12.08□□□□□ -0.48
MTHFD1-211ENST00000555709 HARS2P49590 506 aaKnown RBP12.08□□□□□ -0.48
MTHFD1-211ENST00000555709 KRT81Q14533 505 aa12.08□□□□□ -0.48
MTHFD1-211ENST00000555709 PLK5Q496M5 336 aa12.08□□□□□ -0.48
MTHFD1-211ENST00000555709 FAM72AQ5TYM5 149 aa12.08□□□□□ -0.48
MTHFD1-211ENST00000555709 FAM72DQ6L9T8 149 aa12.08□□□□□ -0.48
MTHFD1-211ENST00000555709 AADACL2Q6P093 401 aa12.08□□□□□ -0.48
MTHFD1-211ENST00000555709 SPOCD1Q6ZMY3 1216 aa12.08□□□□□ -0.48
MTHFD1-211ENST00000555709 HTR3DQ70Z44 454 aa12.08□□□□□ -0.48
MTHFD1-211ENST00000555709 FAM72BQ86X60 149 aa12.08□□□□□ -0.48
MTHFD1-211ENST00000555709 LURAP1LQ8IV03 231 aa12.08□□□□□ -0.48
MTHFD1-211ENST00000555709 DENND1CQ8IV53 801 aa12.08□□□□□ -0.48
MTHFD1-211ENST00000555709 ARID3BQ8IVW6 561 aaPredicted RBP12.08□□□□□ -0.48
MTHFD1-211ENST00000555709 RCOR2Q8IZ40 523 aa12.08□□□□□ -0.48
MTHFD1-211ENST00000555709 DEFB124Q8NES8 71 aa12.08□□□□□ -0.48
MTHFD1-211ENST00000555709 ZNF592Q92610 1267 aa12.08□□□□□ -0.48
MTHFD1-211ENST00000555709 SMARCD2Q92925 531 aa12.08□□□□□ -0.48
MTHFD1-211ENST00000555709 RNF25Q96BH1 459 aaPredicted RBP12.08□□□□□ -0.48
MTHFD1-211ENST00000555709 RSPRY1Q96DX4 576 aa12.08□□□□□ -0.48
MTHFD1-211ENST00000555709 PBKQ96KB5 322 aa12.08□□□□□ -0.48
MTHFD1-211ENST00000555709 C1orf74Q96LT6 269 aa12.08□□□□□ -0.48
MTHFD1-211ENST00000555709 HERPUD2Q9BSE4 406 aa12.08□□□□□ -0.48
MTHFD1-211ENST00000555709 DCLK3Q9C098 648 aa12.08□□□□□ -0.48
MTHFD1-211ENST00000555709 ZFP14Q9HCL3 533 aa12.08□□□□□ -0.48
MTHFD1-211ENST00000555709 OR12D3Q9UGF7 316 aa12.08□□□□□ -0.48
MTHFD1-211ENST00000555709 AGO1Q9UL18 857 aaKnown RBP12.08□□□□□ -0.48
MTHFD1-211ENST00000555709 SAR1BQ9Y6B6 198 aa12.08□□□□□ -0.48
MTHFD1-211ENST00000555709 MYO18BQ8IUG5 2567 aa12.07□□□□□ -0.48
MTHFD1-211ENST00000555709 IGLV3-10A0A075B6K4 115 aa12.07□□□□□ -0.48
MTHFD1-211ENST00000555709 hCG_1818297A0A087WSY0 165 aa12.07□□□□□ -0.48
MTHFD1-211ENST00000555709 E2F8A0AVK6 867 aa12.07□□□□□ -0.48
MTHFD1-211ENST00000555709 ZNF185O15231 689 aa12.07□□□□□ -0.48
MTHFD1-211ENST00000555709 LRIG2O94898 1065 aa12.07□□□□□ -0.48
MTHFD1-211ENST00000555709 PSMC3P17980 439 aa12.07□□□□□ -0.48
MTHFD1-211ENST00000555709 SLC6A4P31645 630 aa12.07□□□□□ -0.48
MTHFD1-211ENST00000555709 SLC11A2P49281 568 aa12.07□□□□□ -0.48
MTHFD1-211ENST00000555709 ZNF135P52742 658 aaPredicted RBP12.07□□□□□ -0.48
MTHFD1-211ENST00000555709 COPS2P61201 443 aa12.07□□□□□ -0.48
MTHFD1-211ENST00000555709 MMRN1Q13201 1228 aa12.07□□□□□ -0.48
MTHFD1-211ENST00000555709 DPYSQ14117 519 aa12.07□□□□□ -0.48
MTHFD1-211ENST00000555709 PPP6R3Q5H9R7 873 aaPredicted RBP12.07□□□□□ -0.48
MTHFD1-211ENST00000555709 DGKKQ5KSL6 1271 aa12.07□□□□□ -0.48
MTHFD1-211ENST00000555709 ACBD5Q5T8D3 534 aaPredicted RBP12.07□□□□□ -0.48
MTHFD1-211ENST00000555709 TXNDC11Q6PKC3 985 aa12.07□□□□□ -0.48
MTHFD1-211ENST00000555709 C14orf80Q86SX3 495 aa12.07□□□□□ -0.48
MTHFD1-211ENST00000555709 CREG2Q8IUH2 290 aa12.07□□□□□ -0.48
MTHFD1-211ENST00000555709 RASGEF1CQ8N431 466 aa12.07□□□□□ -0.48
MTHFD1-211ENST00000555709 KIAA1958Q8N8K9 716 aa12.07□□□□□ -0.48
MTHFD1-211ENST00000555709 KCTD6Q8NC69 237 aa12.07□□□□□ -0.48
MTHFD1-211ENST00000555709 MSANTD3Q96H12 275 aa12.07□□□□□ -0.48
MTHFD1-211ENST00000555709 PRICKLE1Q96MT3 831 aaPredicted RBP12.07□□□□□ -0.48
MTHFD1-211ENST00000555709 CSPG4P5Q96PW8 444 aa12.07□□□□□ -0.48
MTHFD1-211ENST00000555709 EPAS1Q99814 870 aa12.07□□□□□ -0.48
MTHFD1-211ENST00000555709 CALN1Q9BXU9 219 aa12.07□□□□□ -0.48
MTHFD1-211ENST00000555709 DUSP15Q9H1R2 295 aaPredicted RBP12.07□□□□□ -0.48
MTHFD1-211ENST00000555709 CWC15Q9P013 229 aaKnown RBP12.07□□□□□ -0.48
MTHFD1-211ENST00000555709 SLC12A6Q9UHW9 1150 aa12.07□□□□□ -0.48
MTHFD1-211ENST00000555709 LSM7Q9UK45 103 aaKnown RBP12.07□□□□□ -0.48
MTHFD1-211ENST00000555709 TTC7AQ9ULT0 858 aaPredicted RBP12.07□□□□□ -0.48
MTHFD1-211ENST00000555709 SH3BP1Q9Y3L3 701 aa12.07□□□□□ -0.48
MTHFD1-211ENST00000555709 ZNF462Q96JM2 2506 aa12.07□□□□□ -0.48
MTHFD1-211ENST00000555709 GOLGA6L7A0A1B0GV03 622 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms