RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 I6L893 689 aaPredicted RBP12.16□□□□□ -0.46
VRK1-204ENST00000555351 SLC7A4O43246 635 aa12.16□□□□□ -0.46
VRK1-204ENST00000555351 CER1O95813 267 aa12.16□□□□□ -0.46
VRK1-204ENST00000555351 FERP16591 822 aa12.16□□□□□ -0.46
VRK1-204ENST00000555351 GOT1P17174 413 aa12.16□□□□□ -0.46
VRK1-204ENST00000555351 MAOBP27338 520 aa12.16□□□□□ -0.46
VRK1-204ENST00000555351 SLC8A1P32418 973 aa12.16□□□□□ -0.46
VRK1-204ENST00000555351 NUDT1P36639 197 aa12.16□□□□□ -0.46
VRK1-204ENST00000555351 NSFP46459 744 aaKnown RBP12.16□□□□□ -0.46
VRK1-204ENST00000555351 GRIA4P48058 902 aa12.16□□□□□ -0.46
VRK1-204ENST00000555351 CCR5P51681 352 aa12.16□□□□□ -0.46
VRK1-204ENST00000555351 CLCN6P51797 869 aa12.16□□□□□ -0.46
VRK1-204ENST00000555351 C1QBPQ07021 282 aaKnown RBP12.16□□□□□ -0.46
VRK1-204ENST00000555351 SLC20A2Q08357 652 aa12.16□□□□□ -0.46
VRK1-204ENST00000555351 PTP4A2Q12974 167 aa12.16□□□□□ -0.46
VRK1-204ENST00000555351 GRIK2Q13002 908 aa12.16□□□□□ -0.46
VRK1-204ENST00000555351 TEAD4Q15561 434 aa12.16□□□□□ -0.46
VRK1-204ENST00000555351 CLEC16AQ2KHT3 1053 aa12.16□□□□□ -0.46
VRK1-204ENST00000555351 UAP1L1Q3KQV9 507 aa12.16□□□□□ -0.46
VRK1-204ENST00000555351 ARL13BQ3SXY8 428 aa12.16□□□□□ -0.46
VRK1-204ENST00000555351 FAM46CQ5VWP2 391 aa12.16□□□□□ -0.46
VRK1-204ENST00000555351 TRNP1Q6NT89 227 aa12.16□□□□□ -0.46
VRK1-204ENST00000555351 C14orf80Q86SX3 495 aa12.16□□□□□ -0.46
VRK1-204ENST00000555351 FAM124AQ86V42 546 aa12.16□□□□□ -0.46
VRK1-204ENST00000555351 CIR1Q86X95 450 aaPredicted RBP12.16□□□□□ -0.46
VRK1-204ENST00000555351 CACUL1Q86Y37 369 aa12.16□□□□□ -0.46
VRK1-204ENST00000555351 ZCCHC9Q8N567 271 aaKnown RBP12.16□□□□□ -0.46
VRK1-204ENST00000555351 SH2D3CQ8N5H7 860 aa12.16□□□□□ -0.46
VRK1-204ENST00000555351 AOPEPQ8N6M6 819 aa12.16□□□□□ -0.46
VRK1-204ENST00000555351 DCAF4L2Q8NA75 395 aa12.16□□□□□ -0.46
VRK1-204ENST00000555351 OR2T34Q8NGX1 318 aa12.16□□□□□ -0.46
VRK1-204ENST00000555351 OR8D1Q8WZ84 308 aa12.16□□□□□ -0.46
VRK1-204ENST00000555351 BIRC7Q96CA5 298 aa12.16□□□□□ -0.46
VRK1-204ENST00000555351 RPL10LQ96L21 214 aaKnown RBP12.16□□□□□ -0.46
VRK1-204ENST00000555351 CCDC114Q96M63 670 aa12.16□□□□□ -0.46
VRK1-204ENST00000555351 CFAP57Q96MR6 1250 aa12.16□□□□□ -0.46
VRK1-204ENST00000555351 GTPBP2Q9BX10 602 aaKnown RBP12.16□□□□□ -0.46
VRK1-204ENST00000555351 METTL5Q9NRN9 209 aaKnown RBP12.16□□□□□ -0.46
VRK1-204ENST00000555351 EIF2B4Q9UI10 523 aaKnown RBP12.16□□□□□ -0.46
VRK1-204ENST00000555351 A0A1W2PQC6 194 aa12.15□□□□□ -0.46
VRK1-204ENST00000555351 E9PAM4 449 aa12.15□□□□□ -0.46
VRK1-204ENST00000555351 MCF2LO15068 1137 aa12.15□□□□□ -0.46
VRK1-204ENST00000555351 DFNA5O60443 496 aa12.15□□□□□ -0.46
VRK1-204ENST00000555351 RHOCP08134 193 aa12.15□□□□□ -0.46
VRK1-204ENST00000555351 KRT3P12035 628 aa12.15□□□□□ -0.46
VRK1-204ENST00000555351 CD59P13987 128 aa12.15□□□□□ -0.46
VRK1-204ENST00000555351 SDC4P31431 198 aa12.15□□□□□ -0.46
VRK1-204ENST00000555351 STK19P49842 368 aaPredicted RBP12.15□□□□□ -0.46
VRK1-204ENST00000555351 IRAK1P51617 712 aa12.15□□□□□ -0.46
VRK1-204ENST00000555351 GALCP54803 685 aa12.15□□□□□ -0.46
VRK1-204ENST00000555351 CCDC15Q0P6D6 951 aa12.15□□□□□ -0.46
VRK1-204ENST00000555351 ANO6Q4KMQ2 910 aa12.15□□□□□ -0.46
VRK1-204ENST00000555351 FILIP1LQ4L180 1135 aa12.15□□□□□ -0.46
VRK1-204ENST00000555351 C2CD6Q53TS8 623 aa12.15□□□□□ -0.46
VRK1-204ENST00000555351 ARTNQ5T4W7 220 aa12.15□□□□□ -0.46
VRK1-204ENST00000555351 KIAA0895LQ68EN5 471 aa12.15□□□□□ -0.46
VRK1-204ENST00000555351 MMAAQ8IVH4 418 aaKnown RBP12.15□□□□□ -0.46
VRK1-204ENST00000555351 STK40Q8N2I9 435 aa12.15□□□□□ -0.46
VRK1-204ENST00000555351 C3orf20Q8ND61 904 aa12.15□□□□□ -0.46
VRK1-204ENST00000555351 OR52K2Q8NGK3 314 aa12.15□□□□□ -0.46
VRK1-204ENST00000555351 NTAN1Q96AB6 310 aa12.15□□□□□ -0.46
VRK1-204ENST00000555351 VCPIP1Q96JH7 1222 aa12.15□□□□□ -0.46
VRK1-204ENST00000555351 OMDQ99983 421 aa12.15□□□□□ -0.46
VRK1-204ENST00000555351 EDEM3Q9BZQ6 932 aa12.15□□□□□ -0.46
VRK1-204ENST00000555351 ZYG11BQ9C0D3 744 aa12.15□□□□□ -0.46
VRK1-204ENST00000555351 MUC3BQ9H195 1237 aa12.15□□□□□ -0.46
VRK1-204ENST00000555351 MIR1-1HGQ9H1L0 117 aa12.15□□□□□ -0.46
VRK1-204ENST00000555351 OSBPL2Q9H1P3 480 aa12.15□□□□□ -0.46
VRK1-204ENST00000555351 MTG2Q9H4K7 406 aa12.15□□□□□ -0.46
VRK1-204ENST00000555351 RTN4Q9NQC3 1192 aaKnown RBP12.15□□□□□ -0.46
VRK1-204ENST00000555351 ANLNQ9NQW6 1124 aa12.15□□□□□ -0.46
VRK1-204ENST00000555351 ADAM22Q9P0K1 906 aa12.15□□□□□ -0.46
VRK1-204ENST00000555351 ZNF212Q9UDV6 495 aa12.15□□□□□ -0.46
VRK1-204ENST00000555351 FARP1Q9Y4F1 1045 aaPredicted RBP12.15□□□□□ -0.46
VRK1-204ENST00000555351 PCDHGB2Q9Y5G2 931 aa12.15□□□□□ -0.46
VRK1-204ENST00000555351 DOCK4Q8N1I0 1966 aa12.14□□□□□ -0.47
VRK1-204ENST00000555351 ADAMTS9Q9P2N4 1935 aa12.14□□□□□ -0.47
VRK1-204ENST00000555351 A0A1W2PPC4 97 aa12.14□□□□□ -0.47
VRK1-204ENST00000555351 SIGLEC16A6NMB1 481 aa12.14□□□□□ -0.47
VRK1-204ENST00000555351 MID1O15344 667 aa12.14□□□□□ -0.47
VRK1-204ENST00000555351 RNASEH2AO75792 299 aaKnown RBP12.14□□□□□ -0.47
VRK1-204ENST00000555351 CNTN5O94779 1100 aa12.14□□□□□ -0.47
VRK1-204ENST00000555351 TRIM16O95361 564 aa12.14□□□□□ -0.47
VRK1-204ENST00000555351 IL1BP01584 269 aa12.14□□□□□ -0.47
VRK1-204ENST00000555351 IGHV4-34P06331 123 aa12.14□□□□□ -0.47
VRK1-204ENST00000555351 ATP1A3P13637 1013 aa12.14□□□□□ -0.47
VRK1-204ENST00000555351 OR1E1P30953 314 aa12.14□□□□□ -0.47
VRK1-204ENST00000555351 ADRA1BP35368 520 aa12.14□□□□□ -0.47
VRK1-204ENST00000555351 ETFBP38117 255 aa12.14□□□□□ -0.47
VRK1-204ENST00000555351 AIF1P55008 147 aa12.14□□□□□ -0.47
VRK1-204ENST00000555351 RACK1P63244 317 aaKnown RBP12.14□□□□□ -0.47
VRK1-204ENST00000555351 ZNF252P-AS1Q0IIN9 211 aa12.14□□□□□ -0.47
VRK1-204ENST00000555351 DLG2Q15700 870 aa12.14□□□□□ -0.47
VRK1-204ENST00000555351 CCDC14Q49A88 953 aa12.14□□□□□ -0.47
VRK1-204ENST00000555351 ALFQ53S48 1182 aa12.14□□□□□ -0.47
VRK1-204ENST00000555351 DBX2Q6ZNG2 339 aa12.14□□□□□ -0.47
VRK1-204ENST00000555351 MON1BQ7L1V2 547 aa12.14□□□□□ -0.47
VRK1-204ENST00000555351 FAM131BQ86XD5 332 aa12.14□□□□□ -0.47
VRK1-204ENST00000555351 AADATQ8N5Z0 425 aa12.14□□□□□ -0.47
VRK1-204ENST00000555351 DEFB124Q8NES8 71 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms