RNA–Protein interactions for RNA: ENST00000555244.1

CPSF2-204, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 3

Gene CPSF2, Length 806 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-204ENST00000555244 PLA2G15Q8NCC3 412 aa4.48□□□□□ -1.69
CPSF2-204ENST00000555244 LNX1Q8TBB1 728 aaPredicted RBP4.48□□□□□ -1.69
CPSF2-204ENST00000555244 TMEM174Q8WUU8 243 aa4.48□□□□□ -1.69
CPSF2-204ENST00000555244 LARP4BQ92615 738 aaKnown RBP4.48□□□□□ -1.69
CPSF2-204ENST00000555244 EDAQ92838 391 aa4.48□□□□□ -1.69
CPSF2-204ENST00000555244 RELTQ969Z4 430 aa4.48□□□□□ -1.69
CPSF2-204ENST00000555244 SLC7A6OSQ96CW6 309 aaPredicted RBP4.48□□□□□ -1.69
CPSF2-204ENST00000555244 HVCN1Q96D96 273 aa4.48□□□□□ -1.69
CPSF2-204ENST00000555244 DNAJC19Q96DA6 116 aa4.48□□□□□ -1.69
CPSF2-204ENST00000555244 EPSTI1Q96J88 318 aa4.48□□□□□ -1.69
CPSF2-204ENST00000555244 SNX27Q96L92 541 aa4.48□□□□□ -1.69
CPSF2-204ENST00000555244 ZMAT2Q96NC0 199 aaKnown RBP4.48□□□□□ -1.69
CPSF2-204ENST00000555244 USP28Q96RU2 1077 aa4.48□□□□□ -1.69
CPSF2-204ENST00000555244 REEP2Q9BRK0 252 aa4.48□□□□□ -1.69
CPSF2-204ENST00000555244 KIFC3Q9BVG8 833 aa4.48□□□□□ -1.69
CPSF2-204ENST00000555244 CCDC94Q9BW85 323 aaPredicted RBP4.48□□□□□ -1.69
CPSF2-204ENST00000555244 OR10A2Q9H208 303 aa4.48□□□□□ -1.69
CPSF2-204ENST00000555244 KCNH6Q9H252 994 aa4.48□□□□□ -1.69
CPSF2-204ENST00000555244 CXCL16Q9H2A7 254 aa4.48□□□□□ -1.69
CPSF2-204ENST00000555244 PARVGQ9HBI0 331 aa4.48□□□□□ -1.69
CPSF2-204ENST00000555244 OLFML3Q9NRN5 406 aa4.48□□□□□ -1.69
CPSF2-204ENST00000555244 RBM12Q9NTZ6 932 aaKnown RBP4.48□□□□□ -1.69
CPSF2-204ENST00000555244 SLC38A7Q9NVC3 462 aa4.48□□□□□ -1.69
CPSF2-204ENST00000555244 ZDHHC7Q9NXF8 308 aa4.48□□□□□ -1.69
CPSF2-204ENST00000555244 SEL1LQ9UBV2 794 aa4.48□□□□□ -1.69
CPSF2-204ENST00000555244 MAFFQ9ULX9 164 aa4.48□□□□□ -1.69
CPSF2-204ENST00000555244 CLIC4Q9Y696 253 aa4.48□□□□□ -1.69
CPSF2-204ENST00000555244 NCANO14594 1321 aa4.47□□□□□ -1.69
CPSF2-204ENST00000555244 SF3B1O75533 1304 aaKnown RBP eCLIP4.47□□□□□ -1.69
CPSF2-204ENST00000555244 TDRD15B5MCY1 1934 aaKnown RBP4.47□□□□□ -1.69
CPSF2-204ENST00000555244 FAM237AA0A1B0GTK4 181 aa4.47□□□□□ -1.69
CPSF2-204ENST00000555244 VPS37CA5D8V6 355 aaPredicted RBP4.47□□□□□ -1.69
CPSF2-204ENST00000555244 CCDC169A6NNP5 214 aa4.47□□□□□ -1.69
CPSF2-204ENST00000555244 FAM171A2A8MVW0 826 aa4.47□□□□□ -1.69
CPSF2-204ENST00000555244 F8W810 466 aa4.47□□□□□ -1.69
CPSF2-204ENST00000555244 SYN3O14994 580 aa4.47□□□□□ -1.69
CPSF2-204ENST00000555244 SLC16A4O15374 487 aa4.47□□□□□ -1.69
CPSF2-204ENST00000555244 CLDN3O15551 220 aa4.47□□□□□ -1.69
CPSF2-204ENST00000555244 TRAPPC3O43617 180 aa4.47□□□□□ -1.69
CPSF2-204ENST00000555244 PRAMEF4O60810 478 aa4.47□□□□□ -1.69
CPSF2-204ENST00000555244 TADA2AO75478 443 aa4.47□□□□□ -1.69
CPSF2-204ENST00000555244 URODP06132 367 aa4.47□□□□□ -1.69
CPSF2-204ENST00000555244 CLTAP09496 248 aa4.47□□□□□ -1.69
CPSF2-204ENST00000555244 HNRNPA1P09651 372 aaKnown RBP eCLIP4.47□□□□□ -1.69
CPSF2-204ENST00000555244 ZNF888P0CJ79 500 aaPredicted RBP4.47□□□□□ -1.69
CPSF2-204ENST00000555244 GAAP10253 952 aa4.47□□□□□ -1.69
CPSF2-204ENST00000555244 EPCAMP16422 314 aa4.47□□□□□ -1.69
CPSF2-204ENST00000555244 GAP43P17677 238 aa4.47□□□□□ -1.69
CPSF2-204ENST00000555244 SLURP1P55000 103 aa4.47□□□□□ -1.69
CPSF2-204ENST00000555244 ALCAMQ13740 583 aa4.47□□□□□ -1.69
CPSF2-204ENST00000555244 KARSQ15046 597 aaKnown RBP4.47□□□□□ -1.69
CPSF2-204ENST00000555244 GFOD2Q3B7J2 385 aa4.47□□□□□ -1.69
CPSF2-204ENST00000555244 UAP1L1Q3KQV9 507 aa4.47□□□□□ -1.69
CPSF2-204ENST00000555244 LONRF3Q496Y0 759 aa4.47□□□□□ -1.69
CPSF2-204ENST00000555244 MINDY4Q4G0A6 757 aa4.47□□□□□ -1.69
CPSF2-204ENST00000555244 TMEM31Q5JXX7 168 aa4.47□□□□□ -1.69
CPSF2-204ENST00000555244 ATAT1Q5SQI0 421 aa4.47□□□□□ -1.69
CPSF2-204ENST00000555244 AGBL4Q5VU57 503 aa4.47□□□□□ -1.69
CPSF2-204ENST00000555244 SLC8B1Q6J4K2 584 aa4.47□□□□□ -1.69
CPSF2-204ENST00000555244 CCDC73Q6ZRK6 1079 aa4.47□□□□□ -1.69
CPSF2-204ENST00000555244 LARP4Q71RC2 724 aaKnown RBP eCLIP4.47□□□□□ -1.69
CPSF2-204ENST00000555244 HAUS6Q7Z4H7 955 aa4.47□□□□□ -1.69
CPSF2-204ENST00000555244 CLEC14AQ86T13 490 aa4.47□□□□□ -1.69
CPSF2-204ENST00000555244 GPBP1Q86WP2 473 aa4.47□□□□□ -1.69
CPSF2-204ENST00000555244 TP53I13Q8NBR0 393 aaPredicted RBP4.47□□□□□ -1.69
CPSF2-204ENST00000555244 GPR156Q8NFN8 814 aa4.47□□□□□ -1.69
CPSF2-204ENST00000555244 FEZF2Q8TBJ5 459 aa4.47□□□□□ -1.69
CPSF2-204ENST00000555244 RIN2Q8WYP3 895 aaPredicted RBP4.47□□□□□ -1.69
CPSF2-204ENST00000555244 ZNF707Q96C28 371 aaPredicted RBP4.47□□□□□ -1.69
CPSF2-204ENST00000555244 CLIP3Q96DZ5 547 aa4.47□□□□□ -1.69
CPSF2-204ENST00000555244 CDK5RAP3Q96JB5 506 aa4.47□□□□□ -1.69
CPSF2-204ENST00000555244 ZBTB45Q96K62 511 aaPredicted RBP4.47□□□□□ -1.69
CPSF2-204ENST00000555244 C8orf48Q96LL4 319 aa4.47□□□□□ -1.69
CPSF2-204ENST00000555244 RIPOR3Q96MK2 946 aa4.47□□□□□ -1.69
CPSF2-204ENST00000555244 KCNC2Q96PR1 638 aa4.47□□□□□ -1.69
CPSF2-204ENST00000555244 CLSTN3Q9BQT9 956 aa4.47□□□□□ -1.69
CPSF2-204ENST00000555244 PAAF1Q9BRP4 392 aa4.47□□□□□ -1.69
CPSF2-204ENST00000555244 LRFN3Q9BTN0 628 aa4.47□□□□□ -1.69
CPSF2-204ENST00000555244 TTPALQ9BTX7 342 aa4.47□□□□□ -1.69
CPSF2-204ENST00000555244 TNMDQ9H2S6 317 aa4.47□□□□□ -1.69
CPSF2-204ENST00000555244 CUEDC2Q9H467 287 aa4.47□□□□□ -1.69
CPSF2-204ENST00000555244 ASB7Q9H672 318 aa4.47□□□□□ -1.69
CPSF2-204ENST00000555244 SFXN1Q9H9B4 322 aa4.47□□□□□ -1.69
CPSF2-204ENST00000555244 POLD4Q9HCU8 107 aa4.47□□□□□ -1.69
CPSF2-204ENST00000555244 WDR6Q9NNW5 1121 aaKnown RBP4.47□□□□□ -1.69
CPSF2-204ENST00000555244 MTRRQ9UBK8 725 aa4.47□□□□□ -1.69
CPSF2-204ENST00000555244 RAPGEFL1Q9UHV5 662 aa4.47□□□□□ -1.69
CPSF2-204ENST00000555244 TUBD1Q9UJT1 453 aa4.47□□□□□ -1.69
CPSF2-204ENST00000555244 CPSF3Q9UKF6 684 aaKnown RBP4.47□□□□□ -1.69
CPSF2-204ENST00000555244 RCOR1Q9UKL0 485 aa4.47□□□□□ -1.69
CPSF2-204ENST00000555244 TBX20Q9UMR3 447 aa4.47□□□□□ -1.69
CPSF2-204ENST00000555244 PRG3Q9Y2Y8 225 aaPredicted RBP4.47□□□□□ -1.69
CPSF2-204ENST00000555244 DERAQ9Y315 318 aa4.47□□□□□ -1.69
CPSF2-204ENST00000555244 DMDP11532 3685 aa4.47□□□□□ -1.69
CPSF2-204ENST00000555244 MTCL1Q9Y4B5 1905 aaKnown RBP4.46□□□□□ -1.69
CPSF2-204ENST00000555244 A0A1W2PR48 441 aa4.46□□□□□ -1.7
CPSF2-204ENST00000555244 ANO9A1A5B4 782 aa4.46□□□□□ -1.7
CPSF2-204ENST00000555244 ARHGEF37A1IGU5 675 aa4.46□□□□□ -1.7
CPSF2-204ENST00000555244 OTOL1A6NHN0 477 aaPredicted RBP4.46□□□□□ -1.7
CPSF2-204ENST00000555244 MYMKA6NI61 221 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms