RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 ITCHQ96J02 903 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 MARK4Q96L34 752 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 C1QTNF1Q9BXJ1 281 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 CCSER1Q9C0I3 900 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 POMKQ9H5K3 350 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 RABGEF1Q9UJ41 708 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 RPS6KA6Q9UK32 745 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 TAF6LQ9Y6J9 622 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 SMAPO00193 183 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 UBDO15205 165 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 EIF3HO15372 352 aaKnown RBP eCLIP6.99□□□□□ -1.29
SYNE2-216ENST00000555002 ZNF806P0C7X5 589 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 MYBPC3Q14896 1274 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 PKN1Q16512 942 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 METTL21CQ5VZV1 264 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 PRMT9Q6P2P2 845 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 TSHZ1Q6ZSZ6 1077 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 KCTD8Q6ZWB6 473 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 ZBTB10Q96DT7 871 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 TRIM2Q9C040 744 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 DAGLAQ9Y4D2 1042 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 A0A0X1KG70 313 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 ACADSP16219 412 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 PPM1AP35813 382 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 RXRGP48443 463 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 IDH2P48735 452 aaKnown RBP6.99□□□□□ -1.29
SYNE2-216ENST00000555002 NDUFV1P49821 464 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 C4orf22Q6V702 233 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 ZKSCAN4Q969J2 545 aaPredicted RBP6.99□□□□□ -1.29
SYNE2-216ENST00000555002 RAD51AP1Q96B01 352 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 SLC38A2Q96QD8 506 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 PCDHB5Q9Y5E4 795 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 USP17L7P0C7H9 530 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 PURAQ00577 322 aaKnown RBP6.99□□□□□ -1.29
SYNE2-216ENST00000555002 CLEC4GQ6UXB4 293 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 EIF3MQ7L2H7 374 aaKnown RBP6.99□□□□□ -1.29
SYNE2-216ENST00000555002 DHFR2Q86XF0 187 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 C3orf20Q8ND61 904 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 DNAJC11Q9NVH1 559 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 RIMKLBQ9ULI2 386 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 PLOD3O60568 738 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 RAMP2O60895 175 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 STK32CQ86UX6 486 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 POP1Q99575 1024 aaKnown RBP6.99□□□□□ -1.29
SYNE2-216ENST00000555002 SLC40A1Q9NP59 571 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 TBC1D24Q9ULP9 559 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 PHF24Q9UPV7 400 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 NLRP1Q9C000 1473 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 FLT1P17948 1338 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 GRSF1Q12849 480 aaKnown RBP eCLIP6.98□□□□□ -1.29
SYNE2-216ENST00000555002 C9orf131Q5VYM1 1079 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 MTDHQ86UE4 582 aaKnown RBP6.98□□□□□ -1.29
SYNE2-216ENST00000555002 HIPK1Q86Z02 1210 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 PCSK9Q8NBP7 692 aaKnown RBP6.98□□□□□ -1.29
SYNE2-216ENST00000555002 FRMD8Q9BZ67 464 aaPredicted RBP6.98□□□□□ -1.29
SYNE2-216ENST00000555002 PTGFRNQ9P2B2 879 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 CDH9Q9ULB4 789 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 PCDHA11Q9Y5I1 949 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 TMEM2Q9UHN6 1383 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 TTC34A8MYJ7 566 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 MADCAM1Q13477 382 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 NFIXQ14938 502 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 BOLA3Q53S33 107 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 CDC42EP5Q6NZY7 148 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 LRRC70Q7Z2Q7 622 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 APLFQ8IW19 511 aaPredicted RBP6.98□□□□□ -1.29
SYNE2-216ENST00000555002 OR56A4Q8NGH8 313 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 MAML3Q96JK9 1138 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 FCRL4Q96PJ5 515 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 TTLL2Q9BWV7 592 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.98□□□□□ -1.29
SYNE2-216ENST00000555002 ANGPT4Q9Y264 503 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 DHRS7Q9Y394 339 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 H0Y858 1186 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 CLOCKO15516 846 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 ANXA6P08133 673 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 CAPZA1P52907 286 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 CDKL1Q00532 357 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 MYBPC2Q14324 1141 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 TEX47Q8TBZ9 253 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 PMEPA1Q969W9 287 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 OSBPL5Q9H0X9 879 aaPredicted RBP6.98□□□□□ -1.29
SYNE2-216ENST00000555002 CDHR5Q9HBB8 845 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 CATSPERZQ9NTU4 200 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 RBM22Q9NW64 420 aaKnown RBP eCLIP6.98□□□□□ -1.29
SYNE2-216ENST00000555002 CLN6Q9NWW5 311 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 TRIM17Q9Y577 477 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 PZPP20742 1482 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 A0A0A6YYK5 440 aaPredicted RBP6.98□□□□□ -1.29
SYNE2-216ENST00000555002 PPP1R37O75864 691 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 SGPL1O95470 568 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 NTRK1P04629 796 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 FAM86B2P0C5J1 330 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 MYL9P24844 172 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 PTGES3Q15185 160 aaKnown RBP6.98□□□□□ -1.29
SYNE2-216ENST00000555002 HYIQ5T013 277 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 SNCAIPQ9Y6H5 919 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 MYH15Q9Y2K3 1946 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 FFAR3O14843 346 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 GPR42O15529 346 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms