RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 OR6P1Q8NGX9 317 aa16.93■□□□□ 0.3
PCNX1-209ENST00000554879 FCRL2Q96LA5 508 aaPredicted RBP16.93■□□□□ 0.3
PCNX1-209ENST00000554879 OLFM3Q96PB7 478 aa16.93■□□□□ 0.3
PCNX1-209ENST00000554879 PAFAH2Q99487 392 aa16.93■□□□□ 0.3
PCNX1-209ENST00000554879 RNPEPL1Q9HAU8 725 aa16.93■□□□□ 0.3
PCNX1-209ENST00000554879 TRPM5Q9NZQ8 1165 aa16.93■□□□□ 0.3
PCNX1-209ENST00000554879 HCSTQ9UBK5 93 aa16.93■□□□□ 0.3
PCNX1-209ENST00000554879 GGA2Q9UJY4 613 aa16.93■□□□□ 0.3
PCNX1-209ENST00000554879 ZNF646O15015 1829 aaPredicted RBP16.93■□□□□ 0.3
PCNX1-209ENST00000554879 ZSCAN9O15535 394 aaPredicted RBP16.93■□□□□ 0.3
PCNX1-209ENST00000554879 TBX18O95935 607 aa16.93■□□□□ 0.3
PCNX1-209ENST00000554879 ATP6V1C1P21283 382 aa16.93■□□□□ 0.3
PCNX1-209ENST00000554879 ZBTB17Q13105 803 aa16.93■□□□□ 0.3
PCNX1-209ENST00000554879 SIX1Q15475 284 aaPredicted RBP16.93■□□□□ 0.3
PCNX1-209ENST00000554879 RAP1GAP2Q684P5 730 aa16.93■□□□□ 0.3
PCNX1-209ENST00000554879 RASSF3Q86WH2 238 aa16.93■□□□□ 0.3
PCNX1-209ENST00000554879 TTC8Q8TAM2 541 aa16.93■□□□□ 0.3
PCNX1-209ENST00000554879 KCNN1Q92952 543 aa16.93■□□□□ 0.3
PCNX1-209ENST00000554879 DNAJC1Q96KC8 554 aaKnown RBP16.93■□□□□ 0.3
PCNX1-209ENST00000554879 EFR3BQ9Y2G0 817 aa16.93■□□□□ 0.3
PCNX1-209ENST00000554879 CCDC195A0A1B0GUA6 201 aa16.92■□□□□ 0.3
PCNX1-209ENST00000554879 TSPAN3O60637 253 aa16.92■□□□□ 0.3
PCNX1-209ENST00000554879 ENDOD1O94919 500 aa16.92■□□□□ 0.3
PCNX1-209ENST00000554879 KLF1Q13351 362 aaPredicted RBP16.92■□□□□ 0.3
PCNX1-209ENST00000554879 CPT1BQ92523 772 aa16.92■□□□□ 0.3
PCNX1-209ENST00000554879 RBM22Q9NW64 420 aaKnown RBP eCLIP16.92■□□□□ 0.36e-9■■■■■ 47.5
PCNX1-209ENST00000554879 A0A0G2JND7 137 aa16.92■□□□□ 0.3
PCNX1-209ENST00000554879 TRDMT1O14717 391 aaKnown RBP16.92■□□□□ 0.3
PCNX1-209ENST00000554879 GAD2Q05329 585 aa16.92■□□□□ 0.3
PCNX1-209ENST00000554879 BMPR2Q13873 1038 aa16.92■□□□□ 0.3
PCNX1-209ENST00000554879 ANKS3Q6ZW76 656 aa16.92■□□□□ 0.3
PCNX1-209ENST00000554879 P2RY11Q96G91 374 aa16.92■□□□□ 0.3
PCNX1-209ENST00000554879 PAWRQ96IZ0 340 aaKnown RBP16.92■□□□□ 0.3
PCNX1-209ENST00000554879 FAM161BQ96MY7 647 aa16.92■□□□□ 0.3
PCNX1-209ENST00000554879 ZMYND8Q9ULU4 1186 aaPredicted RBP16.92■□□□□ 0.3
PCNX1-209ENST00000554879 TRIM43BA6NCK2 446 aa16.92■□□□□ 0.3
PCNX1-209ENST00000554879 AMHP03971 560 aa16.92■□□□□ 0.3
PCNX1-209ENST00000554879 CKMP06732 381 aa16.92■□□□□ 0.3
PCNX1-209ENST00000554879 USP41Q3LFD5 358 aa16.92■□□□□ 0.3
PCNX1-209ENST00000554879 LRRC6Q86X45 466 aa16.92■□□□□ 0.3
PCNX1-209ENST00000554879 ARHGAP24Q8N264 748 aa16.92■□□□□ 0.3
PCNX1-209ENST00000554879 SLC35B2Q8TB61 432 aa16.92■□□□□ 0.3
PCNX1-209ENST00000554879 IFT43Q96FT9 208 aa16.92■□□□□ 0.3
PCNX1-209ENST00000554879 ZNF558Q96NG5 402 aa16.92■□□□□ 0.3
PCNX1-209ENST00000554879 XAB2Q9HCS7 855 aaKnown RBP16.92■□□□□ 0.3
PCNX1-209ENST00000554879 RGS18Q9NS28 235 aa16.92■□□□□ 0.3
PCNX1-209ENST00000554879 UTP6Q9NYH9 597 aaKnown RBP16.92■□□□□ 0.3
PCNX1-209ENST00000554879 PAGE1O75459 146 aa16.91■□□□□ 0.3
PCNX1-209ENST00000554879 ABL2P42684 1182 aa16.91■□□□□ 0.3
PCNX1-209ENST00000554879 SLC11A1P49279 550 aa16.91■□□□□ 0.3
PCNX1-209ENST00000554879 EPHB1P54762 984 aa16.91■□□□□ 0.3
PCNX1-209ENST00000554879 NR1H3Q13133 447 aa16.91■□□□□ 0.3
PCNX1-209ENST00000554879 ELMOD1Q8N336 334 aa16.91■□□□□ 0.3
PCNX1-209ENST00000554879 BRD8Q9H0E9 1235 aa16.91■□□□□ 0.3
PCNX1-209ENST00000554879 TMLHEQ9NVH6 421 aa16.91■□□□□ 0.3
PCNX1-209ENST00000554879 OTOFQ9HC10 1997 aa16.91■□□□□ 0.3
PCNX1-209ENST00000554879 TRIM49D1C9J1S8 452 aa16.91■□□□□ 0.3
PCNX1-209ENST00000554879 MBL2P11226 248 aaPredicted RBP16.91■□□□□ 0.3
PCNX1-209ENST00000554879 FUT4P22083 530 aa16.91■□□□□ 0.3
PCNX1-209ENST00000554879 FDFT1P37268 417 aa16.91■□□□□ 0.3
PCNX1-209ENST00000554879 AUHQ13825 339 aaKnown RBP16.91■□□□□ 0.3
PCNX1-209ENST00000554879 RIBC1Q8N443 379 aaPredicted RBP16.91■□□□□ 0.3
PCNX1-209ENST00000554879 ABHD8Q96I13 439 aa16.91■□□□□ 0.3
PCNX1-209ENST00000554879 LRCH1Q9Y2L9 728 aa16.91■□□□□ 0.3
PCNX1-209ENST00000554879 LRIG2O94898 1065 aa16.91■□□□□ 0.3
PCNX1-209ENST00000554879 S100BP04271 92 aaPredicted RBP16.91■□□□□ 0.3
PCNX1-209ENST00000554879 MGAT1P26572 445 aa16.91■□□□□ 0.3
PCNX1-209ENST00000554879 ITIH4Q14624 930 aa16.91■□□□□ 0.3
PCNX1-209ENST00000554879 PKN2Q16513 984 aaKnown RBP16.91■□□□□ 0.3
PCNX1-209ENST00000554879 GPR62Q9BZJ7 368 aa16.91■□□□□ 0.3
PCNX1-209ENST00000554879 NT5MQ9NPB1 228 aa16.91■□□□□ 0.3
PCNX1-209ENST00000554879 WDR27A2RRH5 827 aa16.9■□□□□ 0.3
PCNX1-209ENST00000554879 GOLGA8CPA6NN73 597 aa16.9■□□□□ 0.3
PCNX1-209ENST00000554879 C9IYK1 514 aa16.9■□□□□ 0.3
PCNX1-209ENST00000554879 LIN7AO14910 233 aaPredicted RBP16.9■□□□□ 0.3
PCNX1-209ENST00000554879 LRRTM3Q86VH5 581 aa16.9■□□□□ 0.3
PCNX1-209ENST00000554879 MON1AQ86VX9 555 aa16.9■□□□□ 0.3
PCNX1-209ENST00000554879 AUTS2Q8WXX7 1259 aa16.9■□□□□ 0.3
PCNX1-209ENST00000554879 MUC3BQ9H195 1237 aa16.9■□□□□ 0.3
PCNX1-209ENST00000554879 DTLQ9NZJ0 730 aa16.9■□□□□ 0.3
PCNX1-209ENST00000554879 DOLKQ9UPQ8 538 aa16.9■□□□□ 0.3
PCNX1-209ENST00000554879 CEP290O15078 2479 aa16.9■□□□□ 0.3
PCNX1-209ENST00000554879 PTPRFP10586 1907 aa16.9■□□□□ 0.3
PCNX1-209ENST00000554879 F5H5T6 163 aa16.9■□□□□ 0.3
PCNX1-209ENST00000554879 SMAPO00193 183 aa16.9■□□□□ 0.3
PCNX1-209ENST00000554879 TLR5O60602 858 aa16.9■□□□□ 0.3
PCNX1-209ENST00000554879 LMNAP02545 664 aaKnown RBP16.9■□□□□ 0.3
PCNX1-209ENST00000554879 ESRRAP11474 423 aaPredicted RBP16.9■□□□□ 0.3
PCNX1-209ENST00000554879 MYBPC3Q14896 1274 aa16.9■□□□□ 0.3
PCNX1-209ENST00000554879 CLLU1OSQ5K130 101 aa16.9■□□□□ 0.3
PCNX1-209ENST00000554879 C16orf87Q6PH81 154 aa16.9■□□□□ 0.3
PCNX1-209ENST00000554879 C6orf89Q6UWU4 347 aa16.9■□□□□ 0.3
PCNX1-209ENST00000554879 SPATA7Q9P0W8 599 aa16.9■□□□□ 0.3
PCNX1-209ENST00000554879 RBMX2Q9Y388 322 aaKnown RBP16.9■□□□□ 0.3
PCNX1-209ENST00000554879 TYMPP19971 482 aa16.9■□□□□ 0.3
PCNX1-209ENST00000554879 TYK2P29597 1187 aa16.9■□□□□ 0.3
PCNX1-209ENST00000554879 TRNP1Q6NT89 227 aa16.9■□□□□ 0.3
PCNX1-209ENST00000554879 IRGCQ6NXR0 463 aa16.9■□□□□ 0.3
PCNX1-209ENST00000554879 GABPB2Q8TAK5 448 aaPredicted RBP16.9■□□□□ 0.3
PCNX1-209ENST00000554879 CASP10Q92851 521 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms