RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 CISHQ9NSE2 258 aa6.67□□□□□ -1.34
SCFD1-212ENST00000554486 SPG21Q9NZD8 308 aa6.67□□□□□ -1.34
SCFD1-212ENST00000554486 HMGXB4Q9UGU5 601 aa6.67□□□□□ -1.34
SCFD1-212ENST00000554486 RAPGEFL1Q9UHV5 662 aa6.67□□□□□ -1.34
SCFD1-212ENST00000554486 MYO6Q9UM54 1294 aa6.67□□□□□ -1.34
SCFD1-212ENST00000554486 LUC7L2Q9Y383 392 aaKnown RBP6.67□□□□□ -1.34
SCFD1-212ENST00000554486 MYH10P35580 1976 aa6.66□□□□□ -1.34
SCFD1-212ENST00000554486 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.66□□□□□ -1.34
SCFD1-212ENST00000554486 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.66□□□□□ -1.34
SCFD1-212ENST00000554486 HCRTO43612 131 aa6.66□□□□□ -1.34
SCFD1-212ENST00000554486 GFPT2O94808 682 aa6.66□□□□□ -1.34
SCFD1-212ENST00000554486 CA3P07451 260 aa6.66□□□□□ -1.34
SCFD1-212ENST00000554486 TPM1P09493 284 aa6.66□□□□□ -1.34
SCFD1-212ENST00000554486 FAM163BP0C2L3 166 aa6.66□□□□□ -1.34
SCFD1-212ENST00000554486 ODC1P11926 461 aa6.66□□□□□ -1.34
SCFD1-212ENST00000554486 KRT5P13647 590 aa6.66□□□□□ -1.34
SCFD1-212ENST00000554486 CD58P19256 250 aa6.66□□□□□ -1.34
SCFD1-212ENST00000554486 WARSP23381 471 aaKnown RBP6.66□□□□□ -1.34
SCFD1-212ENST00000554486 LMO2P25791 158 aa6.66□□□□□ -1.34
SCFD1-212ENST00000554486 TKTP29401 623 aaKnown RBP6.66□□□□□ -1.34
SCFD1-212ENST00000554486 HNRNPH3P31942 346 aaKnown RBP6.66□□□□□ -1.34
SCFD1-212ENST00000554486 CTNNB1P35222 781 aa6.66□□□□□ -1.34
SCFD1-212ENST00000554486 PPM1AP35813 382 aa6.66□□□□□ -1.34
SCFD1-212ENST00000554486 BMPR1AP36894 532 aa6.66□□□□□ -1.34
SCFD1-212ENST00000554486 GNL1P36915 607 aaPredicted RBP6.66□□□□□ -1.34
SCFD1-212ENST00000554486 STAT1P42224 750 aa6.66□□□□□ -1.34
SCFD1-212ENST00000554486 LIMS1P48059 325 aa6.66□□□□□ -1.34
SCFD1-212ENST00000554486 CDKN1CP49918 316 aaPredicted RBP6.66□□□□□ -1.34
SCFD1-212ENST00000554486 ZNF132P52740 706 aa6.66□□□□□ -1.34
SCFD1-212ENST00000554486 NDST1P52848 882 aa6.66□□□□□ -1.34
SCFD1-212ENST00000554486 RAD23BP54727 409 aa6.66□□□□□ -1.34
SCFD1-212ENST00000554486 DBPQ10586 325 aaPredicted RBP6.66□□□□□ -1.34
SCFD1-212ENST00000554486 FAM171A1Q5VUB5 890 aa6.66□□□□□ -1.34
SCFD1-212ENST00000554486 ESRP1Q6NXG1 681 aaKnown RBP6.66□□□□□ -1.34
SCFD1-212ENST00000554486 CC2D1AQ6P1N0 951 aaPredicted RBP6.66□□□□□ -1.34
SCFD1-212ENST00000554486 WDR59Q6PJI9 974 aa6.66□□□□□ -1.34
SCFD1-212ENST00000554486 TMEM270Q6UE05 265 aa6.66□□□□□ -1.34
SCFD1-212ENST00000554486 CCDC186Q7Z3E2 898 aa6.66□□□□□ -1.34
SCFD1-212ENST00000554486 IRF2BP2Q7Z5L9 587 aa6.66□□□□□ -1.34
SCFD1-212ENST00000554486 TDHQ8IZJ6 230 aa6.66□□□□□ -1.34
SCFD1-212ENST00000554486 TMEM86AQ8N2M4 240 aa6.66□□□□□ -1.34
SCFD1-212ENST00000554486 KIAA1958Q8N8K9 716 aa6.66□□□□□ -1.34
SCFD1-212ENST00000554486 APPL2Q8NEU8 664 aa6.66□□□□□ -1.34
SCFD1-212ENST00000554486 OR8K1Q8NGG5 319 aa6.66□□□□□ -1.34
SCFD1-212ENST00000554486 ANP32BQ92688 251 aaKnown RBP6.66□□□□□ -1.34
SCFD1-212ENST00000554486 SPAG5Q96R06 1193 aa6.66□□□□□ -1.34
SCFD1-212ENST00000554486 TWNKQ96RR1 684 aa6.66□□□□□ -1.34
SCFD1-212ENST00000554486 C17orf80Q9BSJ5 609 aa6.66□□□□□ -1.34
SCFD1-212ENST00000554486 BRINP2Q9C0B6 783 aa6.66□□□□□ -1.34
SCFD1-212ENST00000554486 ELOVL4Q9GZR5 314 aa6.66□□□□□ -1.34
SCFD1-212ENST00000554486 FAM124BQ9H5Z6 455 aaPredicted RBP6.66□□□□□ -1.34
SCFD1-212ENST00000554486 EMC7Q9NPA0 242 aa6.66□□□□□ -1.34
SCFD1-212ENST00000554486 ACP6Q9NPH0 428 aa6.66□□□□□ -1.34
SCFD1-212ENST00000554486 AIPL1Q9NZN9 384 aa6.66□□□□□ -1.34
SCFD1-212ENST00000554486 BARX2Q9UMQ3 279 aaPredicted RBP6.66□□□□□ -1.34
SCFD1-212ENST00000554486 ZKSCAN5Q9Y2L8 839 aa6.66□□□□□ -1.34
SCFD1-212ENST00000554486 ATP8A1Q9Y2Q0 1164 aa6.66□□□□□ -1.34
SCFD1-212ENST00000554486 SPO11Q9Y5K1 396 aa6.66□□□□□ -1.34
SCFD1-212ENST00000554486 SF3B1O75533 1304 aaKnown RBP eCLIP6.66□□□□□ -1.342e-6■■■■■ 70.5
SCFD1-212ENST00000554486 PTPRDP23468 1912 aa6.66□□□□□ -1.34
SCFD1-212ENST00000554486 ADAMTS20P59510 1910 aa6.66□□□□□ -1.34
SCFD1-212ENST00000554486 ATG2AQ2TAZ0 1938 aa6.66□□□□□ -1.34
SCFD1-212ENST00000554486 ARHGEF37A1IGU5 675 aa6.65□□□□□ -1.34
SCFD1-212ENST00000554486 C5orf67F2Z3F1 127 aa6.65□□□□□ -1.34
SCFD1-212ENST00000554486 SYN3O14994 580 aa6.65□□□□□ -1.34
SCFD1-212ENST00000554486 TRAPPC3O43617 180 aa6.65□□□□□ -1.34
SCFD1-212ENST00000554486 TBC1D4O60343 1298 aa6.65□□□□□ -1.34
SCFD1-212ENST00000554486 ATP2C2O75185 946 aa6.65□□□□□ -1.34
SCFD1-212ENST00000554486 FGF18O76093 207 aa6.65□□□□□ -1.34
SCFD1-212ENST00000554486 OAZ2O95190 189 aa6.65□□□□□ -1.34
SCFD1-212ENST00000554486 MPIG6BO95866 241 aa6.65□□□□□ -1.34
SCFD1-212ENST00000554486 MMEP08473 750 aa6.65□□□□□ -1.34
SCFD1-212ENST00000554486 PDGFRBP09619 1106 aa6.65□□□□□ -1.34
SCFD1-212ENST00000554486 BMP7P18075 431 aa6.65□□□□□ -1.34
SCFD1-212ENST00000554486 ACAT1P24752 427 aaKnown RBP6.65□□□□□ -1.34
SCFD1-212ENST00000554486 USP8P40818 1118 aa6.65□□□□□ -1.34
SCFD1-212ENST00000554486 PRKCIP41743 596 aa6.65□□□□□ -1.34
SCFD1-212ENST00000554486 LSSP48449 732 aa6.65□□□□□ -1.34
SCFD1-212ENST00000554486 KIF11P52732 1056 aa6.65□□□□□ -1.34
SCFD1-212ENST00000554486 ERVK-21P61565 698 aa6.65□□□□□ -1.34
SCFD1-212ENST00000554486 YWHAEP62258 255 aaKnown RBP6.65□□□□□ -1.34
SCFD1-212ENST00000554486 TAP1Q03518 808 aa6.65□□□□□ -1.34
SCFD1-212ENST00000554486 CCDC173Q0VFZ6 552 aa6.65□□□□□ -1.34
SCFD1-212ENST00000554486 ELAVL2Q12926 359 aaKnown RBP6.65□□□□□ -1.34
SCFD1-212ENST00000554486 STAT4Q14765 748 aa6.65□□□□□ -1.34
SCFD1-212ENST00000554486 ASIC2Q16515 512 aa6.65□□□□□ -1.34
SCFD1-212ENST00000554486 MEA1Q16626 185 aa6.65□□□□□ -1.34
SCFD1-212ENST00000554486 CCDC142Q17RM4 750 aa6.65□□□□□ -1.34
SCFD1-212ENST00000554486 SFMBT2Q5VUG0 894 aa6.65□□□□□ -1.34
SCFD1-212ENST00000554486 STK32CQ86UX6 486 aa6.65□□□□□ -1.34
SCFD1-212ENST00000554486 SLC47A2Q86VL8 602 aa6.65□□□□□ -1.34
SCFD1-212ENST00000554486 UNC93AQ86WB7 457 aa6.65□□□□□ -1.34
SCFD1-212ENST00000554486 CEP57Q86XR8 500 aa6.65□□□□□ -1.34
SCFD1-212ENST00000554486 TMEM139Q8IV31 216 aa6.65□□□□□ -1.34
SCFD1-212ENST00000554486 CNGA4Q8IV77 575 aa6.65□□□□□ -1.34
SCFD1-212ENST00000554486 SLC4A11Q8NBS3 891 aa6.65□□□□□ -1.34
SCFD1-212ENST00000554486 ZNF397Q8NF99 534 aaPredicted RBP6.65□□□□□ -1.34
SCFD1-212ENST00000554486 OR6B3Q8NGW1 331 aa6.65□□□□□ -1.34
SCFD1-212ENST00000554486 OR10T2Q8NGX3 314 aa6.65□□□□□ -1.34
SCFD1-212ENST00000554486 OLIG1Q8TAK6 271 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms