RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 RPP40O75818 363 aaKnown RBP8.59□□□□□ -1.03
PSEN1-209ENST00000553855 RNF8O76064 485 aa8.59□□□□□ -1.03
PSEN1-209ENST00000553855 ACADMP11310 421 aa8.59□□□□□ -1.03
PSEN1-209ENST00000553855 HNRNPLP14866 589 aaKnown RBP eCLIP8.59□□□□□ -1.03
PSEN1-209ENST00000553855 PSMA2P25787 234 aa8.59□□□□□ -1.03
PSEN1-209ENST00000553855 SLC6A4P31645 630 aa8.59□□□□□ -1.03
PSEN1-209ENST00000553855 PBX1P40424 430 aa8.59□□□□□ -1.03
PSEN1-209ENST00000553855 PXNP49023 591 aaPredicted RBP8.59□□□□□ -1.03
PSEN1-209ENST00000553855 CDH4P55283 916 aa8.59□□□□□ -1.03
PSEN1-209ENST00000553855 RPS24P62847 133 aaKnown RBP8.59□□□□□ -1.03
PSEN1-209ENST00000553855 PITX1P78337 314 aaPredicted RBP8.59□□□□□ -1.03
PSEN1-209ENST00000553855 SULT2A1Q06520 285 aa8.59□□□□□ -1.03
PSEN1-209ENST00000553855 SFSWAPQ12872 951 aaKnown RBP8.59□□□□□ -1.03
PSEN1-209ENST00000553855 AUHQ13825 339 aaKnown RBP8.59□□□□□ -1.03
PSEN1-209ENST00000553855 SIM2Q14190 667 aaPredicted RBP8.59□□□□□ -1.03
PSEN1-209ENST00000553855 ELF2Q15723 593 aa8.59□□□□□ -1.03
PSEN1-209ENST00000553855 GEN1Q17RS7 908 aa8.59□□□□□ -1.03
PSEN1-209ENST00000553855 EFHC2Q5JST6 749 aa8.59□□□□□ -1.03
PSEN1-209ENST00000553855 C6orf118Q5T5N4 469 aa8.59□□□□□ -1.03
PSEN1-209ENST00000553855 EGFLAMQ63HQ2 1017 aa8.59□□□□□ -1.03
PSEN1-209ENST00000553855 MBLAC2Q68D91 279 aa8.59□□□□□ -1.03
PSEN1-209ENST00000553855 NADSYN1Q6IA69 706 aa8.59□□□□□ -1.03
PSEN1-209ENST00000553855 FBXL22Q6P050 247 aa8.59□□□□□ -1.03
PSEN1-209ENST00000553855 SCYL2Q6P3W7 929 aa8.59□□□□□ -1.03
PSEN1-209ENST00000553855 PKN3Q6P5Z2 889 aa8.59□□□□□ -1.03
PSEN1-209ENST00000553855 WDR59Q6PJI9 974 aa8.59□□□□□ -1.03
PSEN1-209ENST00000553855 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.59□□□□□ -1.03
PSEN1-209ENST00000553855 FAM131BQ86XD5 332 aa8.59□□□□□ -1.03
PSEN1-209ENST00000553855 VSTM4Q8IW00 320 aa8.59□□□□□ -1.03
PSEN1-209ENST00000553855 DRC7Q8IY82 874 aa8.59□□□□□ -1.03
PSEN1-209ENST00000553855 CFAP52Q8N1V2 620 aa8.59□□□□□ -1.03
PSEN1-209ENST00000553855 MEIOBQ8N635 442 aa8.59□□□□□ -1.03
PSEN1-209ENST00000553855 ZBTB44Q8NCP5 570 aa8.59□□□□□ -1.03
PSEN1-209ENST00000553855 FAM172AQ8WUF8 416 aa8.59□□□□□ -1.03
PSEN1-209ENST00000553855 HMGB4Q8WW32 186 aa8.59□□□□□ -1.03
PSEN1-209ENST00000553855 EZH1Q92800 747 aaPredicted RBP8.59□□□□□ -1.03
PSEN1-209ENST00000553855 NT5C3BQ969T7 300 aa8.59□□□□□ -1.03
PSEN1-209ENST00000553855 C1orf74Q96LT6 269 aa8.59□□□□□ -1.03
PSEN1-209ENST00000553855 HAPLN3Q96S86 360 aa8.59□□□□□ -1.03
PSEN1-209ENST00000553855 ARHGEF38Q9NXL2 777 aa8.59□□□□□ -1.03
PSEN1-209ENST00000553855 DONSONQ9NYP3 566 aa8.59□□□□□ -1.03
PSEN1-209ENST00000553855 THAP10Q9P2Z0 257 aaPredicted RBP8.59□□□□□ -1.03
PSEN1-209ENST00000553855 MYO1AQ9UBC5 1043 aa8.59□□□□□ -1.03
PSEN1-209ENST00000553855 VTI1BQ9UEU0 232 aa8.59□□□□□ -1.03
PSEN1-209ENST00000553855 CNOT8Q9UFF9 292 aaKnown RBP8.59□□□□□ -1.03
PSEN1-209ENST00000553855 SUN2Q9UH99 717 aa8.59□□□□□ -1.03
PSEN1-209ENST00000553855 ADAMTS1Q9UHI8 967 aa8.59□□□□□ -1.03
PSEN1-209ENST00000553855 SLC25A13Q9UJS0 675 aa8.59□□□□□ -1.03
PSEN1-209ENST00000553855 VANGL2Q9ULK5 521 aa8.59□□□□□ -1.03
PSEN1-209ENST00000553855 HS3ST4Q9Y661 456 aa8.59□□□□□ -1.03
PSEN1-209ENST00000553855 STON1Q9Y6Q2 735 aa8.59□□□□□ -1.03
PSEN1-209ENST00000553855 F5P12259 2224 aa8.58□□□□□ -1.04
PSEN1-209ENST00000553855 C2CD4BA6NLJ0 364 aa8.58□□□□□ -1.04
PSEN1-209ENST00000553855 AKR1B15C9JRZ8 316 aaPredicted RBP8.58□□□□□ -1.04
PSEN1-209ENST00000553855 K7ESF4 209 aa8.58□□□□□ -1.04
PSEN1-209ENST00000553855 AKR1B10O60218 316 aa8.58□□□□□ -1.04
PSEN1-209ENST00000553855 RNASEH1O60930 286 aaKnown RBP8.58□□□□□ -1.04
PSEN1-209ENST00000553855 ZNF217O75362 1048 aa8.58□□□□□ -1.04
PSEN1-209ENST00000553855 RHOBTB1O94844 696 aa8.58□□□□□ -1.04
PSEN1-209ENST00000553855 ADCY5O95622 1261 aa8.58□□□□□ -1.04
PSEN1-209ENST00000553855 GYPCP04921 128 aa8.58□□□□□ -1.04
PSEN1-209ENST00000553855 RPLP1P05386 114 aaKnown RBP8.58□□□□□ -1.04
PSEN1-209ENST00000553855 EPHX1P07099 455 aa8.58□□□□□ -1.04
PSEN1-209ENST00000553855 RHOCP08134 193 aa8.58□□□□□ -1.04
PSEN1-209ENST00000553855 DLDP09622 509 aaKnown RBP8.58□□□□□ -1.04
PSEN1-209ENST00000553855 RRM1P23921 792 aa8.58□□□□□ -1.04
PSEN1-209ENST00000553855 HLA-FP30511 346 aa8.58□□□□□ -1.04
PSEN1-209ENST00000553855 RFC1P35251 1148 aaPredicted RBP8.58□□□□□ -1.04
PSEN1-209ENST00000553855 MRE11P49959 708 aa8.58□□□□□ -1.04
PSEN1-209ENST00000553855 RNF144AP50876 292 aaPredicted RBP8.58□□□□□ -1.04
PSEN1-209ENST00000553855 ZNF143P52747 638 aaPredicted RBP8.58□□□□□ -1.04
PSEN1-209ENST00000553855 AIF1P55008 147 aa8.58□□□□□ -1.04
PSEN1-209ENST00000553855 KRT83P78385 493 aa8.58□□□□□ -1.04
PSEN1-209ENST00000553855 EIF4EBP2Q13542 120 aaPredicted RBP8.58□□□□□ -1.04
PSEN1-209ENST00000553855 ZNF234Q14588 700 aa8.58□□□□□ -1.04
PSEN1-209ENST00000553855 CCDC14Q49A88 953 aa8.58□□□□□ -1.04
PSEN1-209ENST00000553855 CCDC122Q5T0U0 273 aa8.58□□□□□ -1.04
PSEN1-209ENST00000553855 RWDD4Q6NW29 188 aaKnown RBP8.58□□□□□ -1.04
PSEN1-209ENST00000553855 SARM1Q6SZW1 724 aa8.58□□□□□ -1.04
PSEN1-209ENST00000553855 KIAA1324Q6UXG2 1013 aaKnown RBP8.58□□□□□ -1.04
PSEN1-209ENST00000553855 TMC6Q7Z403 805 aa8.58□□□□□ -1.04
PSEN1-209ENST00000553855 SLFN11Q7Z7L1 901 aa8.58□□□□□ -1.04
PSEN1-209ENST00000553855 ALYREFQ86V81 257 aaKnown RBP8.58□□□□□ -1.04
PSEN1-209ENST00000553855 CCAR2Q8N163 923 aaKnown RBP8.58□□□□□ -1.04
PSEN1-209ENST00000553855 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.58□□□□□ -1.04
PSEN1-209ENST00000553855 JOSD2Q8TAC2 188 aa8.58□□□□□ -1.04
PSEN1-209ENST00000553855 FBF1Q8TES7 1133 aa8.58□□□□□ -1.04
PSEN1-209ENST00000553855 GAB3Q8WWW8 586 aa8.58□□□□□ -1.04
PSEN1-209ENST00000553855 CCDC42Q96M95 316 aa8.58□□□□□ -1.04
PSEN1-209ENST00000553855 PRICKLE1Q96MT3 831 aaPredicted RBP8.58□□□□□ -1.04
PSEN1-209ENST00000553855 CNPY3Q9BT09 278 aa8.58□□□□□ -1.04
PSEN1-209ENST00000553855 ZYG11BQ9C0D3 744 aa8.58□□□□□ -1.04
PSEN1-209ENST00000553855 MUC3BQ9H195 1237 aa8.58□□□□□ -1.04
PSEN1-209ENST00000553855 FBRSQ9HAH7 460 aa8.58□□□□□ -1.04
PSEN1-209ENST00000553855 ZDHHC4Q9NPG8 344 aa8.58□□□□□ -1.04
PSEN1-209ENST00000553855 CACNA2D2Q9NY47 1150 aa8.58□□□□□ -1.04
PSEN1-209ENST00000553855 EBF1Q9UH73 591 aa8.58□□□□□ -1.04
PSEN1-209ENST00000553855 XPO7Q9UIA9 1087 aaKnown RBP8.58□□□□□ -1.04
PSEN1-209ENST00000553855 VPS28Q9UK41 221 aa8.58□□□□□ -1.04
PSEN1-209ENST00000553855 SMG5Q9UPR3 1016 aaKnown RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms