RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 FAM49BQ9NUQ9 324 aa16.55■□□□□ 0.24
ACTN1-209ENST00000553659 OSER1Q9NX31 292 aa16.55■□□□□ 0.24
ACTN1-209ENST00000553659 HMGXB4Q9UGU5 601 aa16.55■□□□□ 0.24
ACTN1-209ENST00000553659 DMGDHQ9UI17 866 aaKnown RBP16.55■□□□□ 0.24
ACTN1-209ENST00000553659 ZFHX4Q86UP3 3567 aa16.55■□□□□ 0.24
ACTN1-209ENST00000553659 HHLA1C9JL84 531 aa16.54■□□□□ 0.24
ACTN1-209ENST00000553659 GFRA2O00451 464 aa16.54■□□□□ 0.24
ACTN1-209ENST00000553659 ARHGAP33O14559 1287 aa16.54■□□□□ 0.24
ACTN1-209ENST00000553659 HYAL3O43820 417 aaPredicted RBP16.54■□□□□ 0.24
ACTN1-209ENST00000553659 CISD3P0C7P0 127 aa16.54■□□□□ 0.24
ACTN1-209ENST00000553659 CD19P15391 556 aa16.54■□□□□ 0.24
ACTN1-209ENST00000553659 BRD2P25440 801 aaKnown RBP16.54■□□□□ 0.24
ACTN1-209ENST00000553659 ADORA2BP29275 332 aa16.54■□□□□ 0.24
ACTN1-209ENST00000553659 TNNT3P45378 269 aaPredicted RBP16.54■□□□□ 0.24
ACTN1-209ENST00000553659 PLA2G4AP47712 749 aa16.54■□□□□ 0.24
ACTN1-209ENST00000553659 DGKGP49619 791 aa16.54■□□□□ 0.24
ACTN1-209ENST00000553659 SNX16P57768 344 aa16.54■□□□□ 0.24
ACTN1-209ENST00000553659 RNASE9P60153 205 aaKnown RBP16.54■□□□□ 0.24
ACTN1-209ENST00000553659 SIM1P81133 766 aaPredicted RBP16.54■□□□□ 0.24
ACTN1-209ENST00000553659 HSP90B2PQ58FF3 399 aa16.54■□□□□ 0.24
ACTN1-209ENST00000553659 DCAF12L1Q5VU92 463 aa16.54■□□□□ 0.24
ACTN1-209ENST00000553659 CLEC20AQ6ZU45 233 aa16.54■□□□□ 0.24
ACTN1-209ENST00000553659 GPRIN1Q7Z2K8 1008 aa16.54■□□□□ 0.24
ACTN1-209ENST00000553659 PASD1Q8IV76 773 aa16.54■□□□□ 0.24
ACTN1-209ENST00000553659 KLHL7Q8IXQ5 586 aa16.54■□□□□ 0.24
ACTN1-209ENST00000553659 MINDY1Q8N5J2 469 aa16.54■□□□□ 0.24
ACTN1-209ENST00000553659 C3orf20Q8ND61 904 aa16.54■□□□□ 0.24
ACTN1-209ENST00000553659 ALG3Q92685 438 aa16.54■□□□□ 0.24
ACTN1-209ENST00000553659 ZNF419Q96HQ0 510 aaPredicted RBP16.54■□□□□ 0.24
ACTN1-209ENST00000553659 MED4Q9NPJ6 270 aa16.54■□□□□ 0.24
ACTN1-209ENST00000553659 FAM114A2Q9NRY5 505 aa16.54■□□□□ 0.24
ACTN1-209ENST00000553659 DNMT3LQ9UJW3 386 aa16.54■□□□□ 0.24
ACTN1-209ENST00000553659 CYP8B1Q9UNU6 501 aa16.54■□□□□ 0.24
ACTN1-209ENST00000553659 UTP11Q9Y3A2 253 aaKnown RBP16.54■□□□□ 0.24
ACTN1-209ENST00000553659 MSRB2Q9Y3D2 182 aa16.54■□□□□ 0.24
ACTN1-209ENST00000553659 CEP295Q9C0D2 2601 aa16.54■□□□□ 0.24
ACTN1-209ENST00000553659 FAM208BQ5VWN6 2430 aa16.53■□□□□ 0.24
ACTN1-209ENST00000553659 RAD51CO43502 376 aa16.53■□□□□ 0.24
ACTN1-209ENST00000553659 PHF2O75151 1096 aa16.53■□□□□ 0.24
ACTN1-209ENST00000553659 SASH3O75995 380 aa16.53■□□□□ 0.24
ACTN1-209ENST00000553659 SYPP08247 313 aa16.53■□□□□ 0.24
ACTN1-209ENST00000553659 RDXP35241 583 aaKnown RBP16.53■□□□□ 0.24
ACTN1-209ENST00000553659 FNTAP49354 379 aa16.53■□□□□ 0.24
ACTN1-209ENST00000553659 RAD23BP54727 409 aa16.53■□□□□ 0.24
ACTN1-209ENST00000553659 GUCY2DQ02846 1103 aa16.53■□□□□ 0.24
ACTN1-209ENST00000553659 HNRNPDQ14103 355 aaKnown RBP16.53■□□□□ 0.24
ACTN1-209ENST00000553659 PIGHQ14442 188 aaPredicted RBP16.53■□□□□ 0.24
ACTN1-209ENST00000553659 CNGA2Q16280 664 aa16.53■□□□□ 0.24
ACTN1-209ENST00000553659 SGO2Q562F6 1265 aa16.53■□□□□ 0.24
ACTN1-209ENST00000553659 LRRC38Q5VT99 294 aa16.53■□□□□ 0.24
ACTN1-209ENST00000553659 ZNF276Q8N554 614 aa16.53■□□□□ 0.24
ACTN1-209ENST00000553659 C1orf131Q8NDD1 294 aaKnown RBP16.53■□□□□ 0.24
ACTN1-209ENST00000553659 MRGPRX1Q96LB2 322 aa16.53■□□□□ 0.24
ACTN1-209ENST00000553659 HSPA12BQ96MM6 686 aa16.53■□□□□ 0.24
ACTN1-209ENST00000553659 NT5C1AQ9BXI3 368 aa16.53■□□□□ 0.24
ACTN1-209ENST00000553659 FAM129AQ9BZQ8 928 aa16.53■□□□□ 0.24
ACTN1-209ENST00000553659 UBXN6Q9BZV1 441 aa16.53■□□□□ 0.24
ACTN1-209ENST00000553659 NMUR1Q9HB89 426 aa16.53■□□□□ 0.24
ACTN1-209ENST00000553659 EPB41L5Q9HCM4 733 aa16.53■□□□□ 0.24
ACTN1-209ENST00000553659 PNPLA8Q9NP80 782 aa16.53■□□□□ 0.24
ACTN1-209ENST00000553659 HOMER3Q9NSC5 361 aa16.53■□□□□ 0.24
ACTN1-209ENST00000553659 DNAAF2Q9NVR5 837 aaKnown RBP16.53■□□□□ 0.24
ACTN1-209ENST00000553659 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.53■□□□□ 0.24
ACTN1-209ENST00000553659 FBXO10Q9UK96 956 aa16.53■□□□□ 0.24
ACTN1-209ENST00000553659 RAD54BQ9Y620 910 aa16.53■□□□□ 0.24
ACTN1-209ENST00000553659 A0A1W2PQH9 124 aa16.52■□□□□ 0.24
ACTN1-209ENST00000553659 SRRM3A6NNA2 597 aaPredicted RBP16.52■□□□□ 0.24
ACTN1-209ENST00000553659 BHMG1C9JSJ3 638 aaPredicted RBP16.52■□□□□ 0.24
ACTN1-209ENST00000553659 H0Y626 953 aa16.52■□□□□ 0.24
ACTN1-209ENST00000553659 NDUFS2O75306 463 aa16.52■□□□□ 0.24
ACTN1-209ENST00000553659 TRIM16O95361 564 aa16.52■□□□□ 0.24
ACTN1-209ENST00000553659 SETSIPP0DME0 302 aa16.52■□□□□ 0.24
ACTN1-209ENST00000553659 RARGP13631 454 aa16.52■□□□□ 0.24
ACTN1-209ENST00000553659 CD59P13987 128 aa16.52■□□□□ 0.24
ACTN1-209ENST00000553659 CYP1B1Q16678 543 aa16.52■□□□□ 0.24
ACTN1-209ENST00000553659 ZNF394Q53GI3 561 aa16.52■□□□□ 0.24
ACTN1-209ENST00000553659 SYCP2LQ5T4T6 812 aa16.52■□□□□ 0.24
ACTN1-209ENST00000553659 DCUN1D2Q6PH85 259 aa16.52■□□□□ 0.24
ACTN1-209ENST00000553659 Q6ZNB5 142 aa16.52■□□□□ 0.24
ACTN1-209ENST00000553659 SLC13A5Q86YT5 568 aaPredicted RBP16.52■□□□□ 0.24
ACTN1-209ENST00000553659 KATNAL2Q8IYT4 538 aa16.52■□□□□ 0.24
ACTN1-209ENST00000553659 GOLGA6L1Q8N7Z2 621 aa16.52■□□□□ 0.24
ACTN1-209ENST00000553659 NIPA2Q8N8Q9 360 aa16.52■□□□□ 0.24
ACTN1-209ENST00000553659 SLC4A11Q8NBS3 891 aa16.52■□□□□ 0.24
ACTN1-209ENST00000553659 FNIP1Q8TF40 1166 aa16.52■□□□□ 0.24
ACTN1-209ENST00000553659 KRT35Q92764 455 aa16.52■□□□□ 0.24
ACTN1-209ENST00000553659 ERLEC1Q96DZ1 483 aa16.52■□□□□ 0.24
ACTN1-209ENST00000553659 TWNKQ96RR1 684 aa16.52■□□□□ 0.24
ACTN1-209ENST00000553659 AP1M1Q9BXS5 423 aa16.52■□□□□ 0.24
ACTN1-209ENST00000553659 CACNA2D2Q9NY47 1150 aa16.52■□□□□ 0.24
ACTN1-209ENST00000553659 NUDT5Q9UKK9 219 aa16.52■□□□□ 0.24
ACTN1-209ENST00000553659 KLK13Q9UKR3 277 aa16.52■□□□□ 0.24
ACTN1-209ENST00000553659 FAM221BA6H8Z2 402 aa16.51■□□□□ 0.23
ACTN1-209ENST00000553659 TMEM191CA6NGB0 347 aa16.51■□□□□ 0.23
ACTN1-209ENST00000553659 WASH3PC4AMC7 463 aa16.51■□□□□ 0.23
ACTN1-209ENST00000553659 MDM4O15151 490 aa16.51■□□□□ 0.23
ACTN1-209ENST00000553659 STC2O76061 302 aa16.51■□□□□ 0.23
ACTN1-209ENST00000553659 GLI1P08151 1106 aa16.51■□□□□ 0.23
ACTN1-209ENST00000553659 PSEN1P49768 467 aa16.51■□□□□ 0.23
ACTN1-209ENST00000553659 SLC7A5Q01650 507 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms