RNA–Protein interactions for RNA: ENST00000553622.5

CHD8-204, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-204ENST00000553622 NEBLO76041 1014 aa10□□□□□ -0.81
CHD8-204ENST00000553622 PENKP01210 267 aaPredicted RBP10□□□□□ -0.81
CHD8-204ENST00000553622 IFNB1P01574 187 aa10□□□□□ -0.81
CHD8-204ENST00000553622 MZF1P28698 734 aaPredicted RBP10□□□□□ -0.81
CHD8-204ENST00000553622 CHRNA3P32297 505 aa10□□□□□ -0.81
CHD8-204ENST00000553622 CD70P32970 193 aa10□□□□□ -0.81
CHD8-204ENST00000553622 ETFBP38117 255 aa10□□□□□ -0.81
CHD8-204ENST00000553622 COILP38432 576 aaPredicted RBP10□□□□□ -0.81
CHD8-204ENST00000553622 GARSP41250 739 aaKnown RBP10□□□□□ -0.81
CHD8-204ENST00000553622 KDSRQ06136 332 aa10□□□□□ -0.81
CHD8-204ENST00000553622 GALNT2Q10471 571 aa10□□□□□ -0.81
CHD8-204ENST00000553622 LMAN2Q12907 356 aa10□□□□□ -0.81
CHD8-204ENST00000553622 RUNX3Q13761 415 aa10□□□□□ -0.81
CHD8-204ENST00000553622 PPP1R7Q15435 360 aa10□□□□□ -0.81
CHD8-204ENST00000553622 ITPRIPL2Q3MIP1 535 aa10□□□□□ -0.81
CHD8-204ENST00000553622 PARP15Q460N3 678 aa10□□□□□ -0.81
CHD8-204ENST00000553622 SLC45A4Q5BKX6 768 aa10□□□□□ -0.81
CHD8-204ENST00000553622 FSCBQ5H9T9 825 aa10□□□□□ -0.81
CHD8-204ENST00000553622 MPP7Q5T2T1 576 aa10□□□□□ -0.81
CHD8-204ENST00000553622 HEATR6Q6AI08 1181 aaKnown RBP10□□□□□ -0.81
CHD8-204ENST00000553622 CXorf57Q6NSI4 855 aaKnown RBP10□□□□□ -0.81
CHD8-204ENST00000553622 CCDC70Q6NSX1 233 aa10□□□□□ -0.81
CHD8-204ENST00000553622 C8orf74Q6P047 294 aa10□□□□□ -0.81
CHD8-204ENST00000553622 TTC27Q6P3X3 843 aa10□□□□□ -0.81
CHD8-204ENST00000553622 LEKR1Q6ZMV7 388 aa10□□□□□ -0.81
CHD8-204ENST00000553622 ARHGAP36Q6ZRI8 547 aa10□□□□□ -0.81
CHD8-204ENST00000553622 ZNF572Q7Z3I7 529 aaPredicted RBP10□□□□□ -0.81
CHD8-204ENST00000553622 ARHGAP12Q8IWW6 846 aa10□□□□□ -0.81
CHD8-204ENST00000553622 UMODL1-AS1Q8N2C9 162 aa10□□□□□ -0.81
CHD8-204ENST00000553622 CCDC89Q8N998 374 aa10□□□□□ -0.81
CHD8-204ENST00000553622 C12orf50Q8NA57 414 aaPredicted RBP10□□□□□ -0.81
CHD8-204ENST00000553622 OR52K2Q8NGK3 314 aa10□□□□□ -0.81
CHD8-204ENST00000553622 USP33Q8TEY7 942 aa10□□□□□ -0.81
CHD8-204ENST00000553622 P2RY11Q96G91 374 aa10□□□□□ -0.81
CHD8-204ENST00000553622 QKIQ96PU8 341 aaKnown RBP eCLIP10□□□□□ -0.81
CHD8-204ENST00000553622 FERMT1Q9BQL6 677 aa10□□□□□ -0.81
CHD8-204ENST00000553622 TMEM121Q9BTD3 319 aa10□□□□□ -0.81
CHD8-204ENST00000553622 FRMD8P1Q9BZ68 369 aaPredicted RBP10□□□□□ -0.81
CHD8-204ENST00000553622 KLC2Q9H0B6 622 aa10□□□□□ -0.81
CHD8-204ENST00000553622 MAGEH1Q9H213 219 aa10□□□□□ -0.81
CHD8-204ENST00000553622 RETREG1Q9H6L5 497 aa10□□□□□ -0.81
CHD8-204ENST00000553622 NOL6Q9H6R4 1146 aaKnown RBP10□□□□□ -0.81
CHD8-204ENST00000553622 LRRC19Q9H756 370 aa10□□□□□ -0.81
CHD8-204ENST00000553622 KCNK12Q9HB15 430 aa10□□□□□ -0.81
CHD8-204ENST00000553622 HPS4Q9NQG7 708 aa10□□□□□ -0.81
CHD8-204ENST00000553622 ABCB8Q9NUT2 735 aa10□□□□□ -0.81
CHD8-204ENST00000553622 MARK1Q9P0L2 795 aa10□□□□□ -0.81
CHD8-204ENST00000553622 KIAA1522Q9P206 1035 aaPredicted RBP10□□□□□ -0.81
CHD8-204ENST00000553622 ZNF212Q9UDV6 495 aa10□□□□□ -0.81
CHD8-204ENST00000553622 RAD54BQ9Y620 910 aa10□□□□□ -0.81
CHD8-204ENST00000553622 OTOL1A6NHN0 477 aaPredicted RBP9.99□□□□□ -0.81
CHD8-204ENST00000553622 HACD1B0YJ81 288 aa9.99□□□□□ -0.81
CHD8-204ENST00000553622 NCAM2O15394 837 aa9.99□□□□□ -0.81
CHD8-204ENST00000553622 HOXC11O43248 304 aaPredicted RBP9.99□□□□□ -0.81
CHD8-204ENST00000553622 STK10O94804 968 aaKnown RBP9.99□□□□□ -0.81
CHD8-204ENST00000553622 ECEL1O95672 775 aa9.99□□□□□ -0.81
CHD8-204ENST00000553622 GAS8O95995 478 aa9.99□□□□□ -0.81
CHD8-204ENST00000553622 GLDCP23378 1020 aa9.99□□□□□ -0.81
CHD8-204ENST00000553622 RBL1P28749 1068 aa9.99□□□□□ -0.81
CHD8-204ENST00000553622 FNTAP49354 379 aa9.99□□□□□ -0.81
CHD8-204ENST00000553622 DGKGP49619 791 aa9.99□□□□□ -0.81
CHD8-204ENST00000553622 VPS41P49754 854 aa9.99□□□□□ -0.81
CHD8-204ENST00000553622 TERF1P54274 439 aa9.99□□□□□ -0.81
CHD8-204ENST00000553622 YBEYP58557 167 aaPredicted RBP9.99□□□□□ -0.81
CHD8-204ENST00000553622 DR1Q01658 176 aa9.99□□□□□ -0.81
CHD8-204ENST00000553622 LMNB2Q03252 620 aa9.99□□□□□ -0.81
CHD8-204ENST00000553622 XRCC4Q13426 336 aa9.99□□□□□ -0.81
CHD8-204ENST00000553622 TRIP13Q15645 432 aaPredicted RBP9.99□□□□□ -0.81
CHD8-204ENST00000553622 CYP1B1Q16678 543 aa9.99□□□□□ -0.81
CHD8-204ENST00000553622 FAM182AQ5T1J6 154 aa9.99□□□□□ -0.81
CHD8-204ENST00000553622 AFMIDQ63HM1 303 aa9.99□□□□□ -0.81
CHD8-204ENST00000553622 GRAMD4Q6IC98 578 aa9.99□□□□□ -0.81
CHD8-204ENST00000553622 C12orf40Q86WS4 652 aa9.99□□□□□ -0.81
CHD8-204ENST00000553622 CCDC13Q8IYE1 715 aa9.99□□□□□ -0.81
CHD8-204ENST00000553622 APCDD1Q8J025 514 aa9.99□□□□□ -0.81
CHD8-204ENST00000553622 TAB3Q8N5C8 712 aaPredicted RBP9.99□□□□□ -0.81
CHD8-204ENST00000553622 FAM71DQ8N9W8 422 aa9.99□□□□□ -0.81
CHD8-204ENST00000553622 NOA1Q8NC60 698 aaKnown RBP9.99□□□□□ -0.81
CHD8-204ENST00000553622 CCDC26Q8TAB7 109 aa9.99□□□□□ -0.81
CHD8-204ENST00000553622 FIBINQ8TAL6 211 aa9.99□□□□□ -0.81
CHD8-204ENST00000553622 SLC35B2Q8TB61 432 aa9.99□□□□□ -0.81
CHD8-204ENST00000553622 GRK7Q8WTQ7 553 aa9.99□□□□□ -0.81
CHD8-204ENST00000553622 NSMCE1Q8WV22 266 aa9.99□□□□□ -0.81
CHD8-204ENST00000553622 ARHGEF2Q92974 986 aaKnown RBP9.99□□□□□ -0.81
CHD8-204ENST00000553622 NKD2Q969F2 451 aaPredicted RBP9.99□□□□□ -0.81
CHD8-204ENST00000553622 HDAC11Q96DB2 347 aa9.99□□□□□ -0.81
CHD8-204ENST00000553622 RUNDC3BQ96NL0 473 aa9.99□□□□□ -0.81
CHD8-204ENST00000553622 OLFM3Q96PB7 478 aa9.99□□□□□ -0.81
CHD8-204ENST00000553622 CEP41Q9BYV8 373 aa9.99□□□□□ -0.81
CHD8-204ENST00000553622 IGSF9Q9P2J2 1179 aa9.99□□□□□ -0.81
CHD8-204ENST00000553622 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.99□□□□□ -0.815e-6■□□□□ 10.3
CHD8-204ENST00000553622 AMACRQ9UHK6 382 aa9.99□□□□□ -0.81
CHD8-204ENST00000553622 IPO11Q9UI26 975 aaKnown RBP9.99□□□□□ -0.81
CHD8-204ENST00000553622 GGA2Q9UJY4 613 aa9.99□□□□□ -0.81
CHD8-204ENST00000553622 TBC1D30Q9Y2I9 924 aa9.99□□□□□ -0.81
CHD8-204ENST00000553622 TTLL3Q9Y4R7 772 aa9.99□□□□□ -0.81
CHD8-204ENST00000553622 V9GYY5 206 aaPredicted RBP9.99□□□□□ -0.81
CHD8-204ENST00000553622 COL4A2P08572 1712 aa9.99□□□□□ -0.81
CHD8-204ENST00000553622 CFAP69A5D8W1 941 aa9.98□□□□□ -0.81
CHD8-204ENST00000553622 F5H423 210 aaPredicted RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms