RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 LRRC56Q8IYG6 542 aaPredicted RBP5.21□□□□□ -1.58
VTI1B-202ENST00000553619 TDHQ8IZJ6 230 aa5.21□□□□□ -1.58
VTI1B-202ENST00000553619 DEFB106AQ8N104 65 aa5.21□□□□□ -1.58
VTI1B-202ENST00000553619 MRPL43Q8N983 215 aaKnown RBP5.21□□□□□ -1.58
VTI1B-202ENST00000553619 LRRC57Q8N9N7 239 aa5.21□□□□□ -1.58
VTI1B-202ENST00000553619 ATAD1Q8NBU5 361 aa5.21□□□□□ -1.58
VTI1B-202ENST00000553619 STKLD1Q8NE28 680 aa5.21□□□□□ -1.58
VTI1B-202ENST00000553619 ZMIZ2Q8NF64 920 aa5.21□□□□□ -1.58
VTI1B-202ENST00000553619 CYB5D2Q8WUJ1 264 aa5.21□□□□□ -1.58
VTI1B-202ENST00000553619 FBXO32Q969P5 355 aa5.21□□□□□ -1.58
VTI1B-202ENST00000553619 HES6Q96HZ4 224 aa5.21□□□□□ -1.58
VTI1B-202ENST00000553619 RBM41Q96IZ5 413 aaKnown RBP5.21□□□□□ -1.58
VTI1B-202ENST00000553619 PGLYRP2Q96PD5 576 aa5.21□□□□□ -1.58
VTI1B-202ENST00000553619 WDR24Q96S15 920 aa5.21□□□□□ -1.58
VTI1B-202ENST00000553619 OSBPL9Q96SU4 736 aa5.21□□□□□ -1.58
VTI1B-202ENST00000553619 TBCBQ99426 244 aa5.21□□□□□ -1.58
VTI1B-202ENST00000553619 CDCA3Q99618 268 aaPredicted RBP5.21□□□□□ -1.58
VTI1B-202ENST00000553619 SEPT5Q99719 369 aaPredicted RBP5.21□□□□□ -1.58
VTI1B-202ENST00000553619 TCF25Q9BQ70 676 aa5.21□□□□□ -1.58
VTI1B-202ENST00000553619 MAK16Q9BXY0 300 aaKnown RBP5.21□□□□□ -1.58
VTI1B-202ENST00000553619 ULBP1Q9BZM6 244 aa5.21□□□□□ -1.58
VTI1B-202ENST00000553619 CARD9Q9H257 536 aa5.21□□□□□ -1.58
VTI1B-202ENST00000553619 NSUN3Q9H649 340 aaKnown RBP5.21□□□□□ -1.58
VTI1B-202ENST00000553619 PRDM16Q9HAZ2 1276 aa5.21□□□□□ -1.58
VTI1B-202ENST00000553619 KCNK12Q9HB15 430 aa5.21□□□□□ -1.58
VTI1B-202ENST00000553619 ALG13Q9NP73 1137 aaKnown RBP5.21□□□□□ -1.58
VTI1B-202ENST00000553619 CLIC5Q9NZA1 410 aa5.21□□□□□ -1.58
VTI1B-202ENST00000553619 IL37Q9NZH6 218 aa5.21□□□□□ -1.58
VTI1B-202ENST00000553619 TRPM5Q9NZQ8 1165 aa5.21□□□□□ -1.58
VTI1B-202ENST00000553619 FEZ2Q9UHY8 353 aaPredicted RBP5.21□□□□□ -1.58
VTI1B-202ENST00000553619 SNX12Q9UMY4 172 aa5.21□□□□□ -1.58
VTI1B-202ENST00000553619 COG5Q9UP83 839 aa5.21□□□□□ -1.58
VTI1B-202ENST00000553619 NLRC5Q86WI3 1866 aa5.21□□□□□ -1.58
VTI1B-202ENST00000553619 COL4A6Q14031 1691 aa5.21□□□□□ -1.58
VTI1B-202ENST00000553619 PTPRDP23468 1912 aa5.21□□□□□ -1.58
VTI1B-202ENST00000553619 A0A0U1RQJ8 604 aa5.2□□□□□ -1.58
VTI1B-202ENST00000553619 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.2□□□□□ -1.58
VTI1B-202ENST00000553619 A0A1W2PPC1 479 aa5.2□□□□□ -1.58
VTI1B-202ENST00000553619 FAM92AA1XBS5 289 aa5.2□□□□□ -1.58
VTI1B-202ENST00000553619 CTAGE15A4D2H0 777 aa5.2□□□□□ -1.58
VTI1B-202ENST00000553619 C2orf71A6NGG8 1288 aa5.2□□□□□ -1.58
VTI1B-202ENST00000553619 SLC38A8A6NNN8 435 aa5.2□□□□□ -1.58
VTI1B-202ENST00000553619 TULP2O00295 520 aa5.2□□□□□ -1.58
VTI1B-202ENST00000553619 KCNK3O14649 394 aa5.2□□□□□ -1.58
VTI1B-202ENST00000553619 TEX28O15482 410 aa5.2□□□□□ -1.58
VTI1B-202ENST00000553619 ENDOD1O94919 500 aa5.2□□□□□ -1.58
VTI1B-202ENST00000553619 TRUB2O95900 331 aaKnown RBP5.2□□□□□ -1.58
VTI1B-202ENST00000553619 FTCDO95954 541 aa5.2□□□□□ -1.58
VTI1B-202ENST00000553619 GLUD1P00367 558 aa5.2□□□□□ -1.58
VTI1B-202ENST00000553619 ATP1A1P05023 1023 aaKnown RBP5.2□□□□□ -1.58
VTI1B-202ENST00000553619 CA3P07451 260 aa5.2□□□□□ -1.58
VTI1B-202ENST00000553619 CNPP09543 421 aaKnown RBP5.2□□□□□ -1.58
VTI1B-202ENST00000553619 C1QTNF9P0C862 333 aa5.2□□□□□ -1.58
VTI1B-202ENST00000553619 CTAGE8P0CG41 777 aa5.2□□□□□ -1.58
VTI1B-202ENST00000553619 SRGAP2BP0DMP2 458 aa5.2□□□□□ -1.58
VTI1B-202ENST00000553619 PTPN2P17706 415 aa5.2□□□□□ -1.58
VTI1B-202ENST00000553619 PFKLP17858 780 aa5.2□□□□□ -1.58
VTI1B-202ENST00000553619 RPL17P18621 184 aaKnown RBP5.2□□□□□ -1.58
VTI1B-202ENST00000553619 CTNNA1P35221 906 aaKnown RBP5.2□□□□□ -1.58
VTI1B-202ENST00000553619 ATP5C1P36542 298 aaKnown RBP5.2□□□□□ -1.58
VTI1B-202ENST00000553619 SULT1E1P49888 294 aa5.2□□□□□ -1.58
VTI1B-202ENST00000553619 ERVFC1P60507 584 aa5.2□□□□□ -1.58
VTI1B-202ENST00000553619 YWHAGP61981 247 aaKnown RBP eCLIP5.2□□□□□ -1.58
VTI1B-202ENST00000553619 LMNB2Q03252 620 aa5.2□□□□□ -1.58
VTI1B-202ENST00000553619 DEUP1Q05D60 604 aa5.2□□□□□ -1.58
VTI1B-202ENST00000553619 IFRD2Q12894 506 aaPredicted RBP5.2□□□□□ -1.58
VTI1B-202ENST00000553619 PDK2Q15119 407 aa5.2□□□□□ -1.58
VTI1B-202ENST00000553619 CCDC14Q49A88 953 aa5.2□□□□□ -1.58
VTI1B-202ENST00000553619 PPM1LQ5SGD2 360 aa5.2□□□□□ -1.58
VTI1B-202ENST00000553619 ERMARDQ5T6L9 678 aa5.2□□□□□ -1.58
VTI1B-202ENST00000553619 BSPRYQ5W0U4 402 aa5.2□□□□□ -1.58
VTI1B-202ENST00000553619 SCYL2Q6P3W7 929 aa5.2□□□□□ -1.58
VTI1B-202ENST00000553619 LILRA6Q6PI73 481 aa5.2□□□□□ -1.58
VTI1B-202ENST00000553619 BZW1Q7L1Q6 419 aaKnown RBP5.2□□□□□ -1.58
VTI1B-202ENST00000553619 RSRC2Q7L4I2 434 aaKnown RBP5.2□□□□□ -1.58
VTI1B-202ENST00000553619 CTAGE6Q86UF2 777 aa5.2□□□□□ -1.58
VTI1B-202ENST00000553619 VSIG1Q86XK7 387 aa5.2□□□□□ -1.58
VTI1B-202ENST00000553619 CTAGE4Q8IX94 777 aa5.2□□□□□ -1.58
VTI1B-202ENST00000553619 LEMD2Q8NC56 503 aa5.2□□□□□ -1.58
VTI1B-202ENST00000553619 KCTD6Q8NC69 237 aa5.2□□□□□ -1.58
VTI1B-202ENST00000553619 KREMEN2Q8NCW0 462 aa5.2□□□□□ -1.58
VTI1B-202ENST00000553619 PHC3Q8NDX5 983 aa5.2□□□□□ -1.58
VTI1B-202ENST00000553619 EXD1Q8NHP7 514 aa5.2□□□□□ -1.58
VTI1B-202ENST00000553619 JOSD2Q8TAC2 188 aa5.2□□□□□ -1.58
VTI1B-202ENST00000553619 ATRIPQ8WXE1 791 aa5.2□□□□□ -1.58
VTI1B-202ENST00000553619 CENPIQ92674 756 aaPredicted RBP5.2□□□□□ -1.58
VTI1B-202ENST00000553619 RNF34Q969K3 372 aa5.2□□□□□ -1.58
VTI1B-202ENST00000553619 PGAP3Q96FM1 320 aaPredicted RBP5.2□□□□□ -1.58
VTI1B-202ENST00000553619 TRMT2BQ96GJ1 504 aaKnown RBP5.2□□□□□ -1.58
VTI1B-202ENST00000553619 B3GALT6Q96L58 329 aa5.2□□□□□ -1.58
VTI1B-202ENST00000553619 FAM161BQ96MY7 647 aa5.2□□□□□ -1.58
VTI1B-202ENST00000553619 SLC2A13Q96QE2 648 aa5.2□□□□□ -1.58
VTI1B-202ENST00000553619 GCNAQ96QF7 691 aa5.2□□□□□ -1.58
VTI1B-202ENST00000553619 C17orf80Q9BSJ5 609 aa5.2□□□□□ -1.58
VTI1B-202ENST00000553619 TTLL2Q9BWV7 592 aa5.2□□□□□ -1.58
VTI1B-202ENST00000553619 VN1R3Q9BXE9 311 aa5.2□□□□□ -1.58
VTI1B-202ENST00000553619 TLR10Q9BXR5 811 aa5.2□□□□□ -1.58
VTI1B-202ENST00000553619 WDCPQ9H6R7 721 aa5.2□□□□□ -1.58
VTI1B-202ENST00000553619 RRAGDQ9NQL2 400 aaPredicted RBP5.2□□□□□ -1.58
VTI1B-202ENST00000553619 HOMER3Q9NSC5 361 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms