RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 PIK3CAP42336 1068 aa14.26□□□□□ -0.13
PRPF39-204ENST00000553605 SLC8A3P57103 927 aa14.26□□□□□ -0.13
PRPF39-204ENST00000553605 RPS24P62847 133 aaKnown RBP14.26□□□□□ -0.13
PRPF39-204ENST00000553605 CLCA4Q14CN2 919 aa14.26□□□□□ -0.13
PRPF39-204ENST00000553605 SKIDA1Q1XH10 827 aa14.26□□□□□ -0.13
PRPF39-204ENST00000553605 ZNF394Q53GI3 561 aa14.26□□□□□ -0.13
PRPF39-204ENST00000553605 AGBL4Q5VU57 503 aa14.26□□□□□ -0.13
PRPF39-204ENST00000553605 FAM46CQ5VWP2 391 aa14.26□□□□□ -0.13
PRPF39-204ENST00000553605 HIST2H2BCQ6DN03 193 aa14.26□□□□□ -0.13
PRPF39-204ENST00000553605 DSG4Q86SJ6 1040 aa14.26□□□□□ -0.13
PRPF39-204ENST00000553605 JAMLQ86YT9 394 aa14.26□□□□□ -0.13
PRPF39-204ENST00000553605 UNC45BQ8IWX7 931 aa14.26□□□□□ -0.13
PRPF39-204ENST00000553605 SLC22A18ASQ8N1D0 253 aa14.26□□□□□ -0.13
PRPF39-204ENST00000553605 PDILTQ8N807 584 aa14.26□□□□□ -0.13
PRPF39-204ENST00000553605 WDR48Q8TAF3 677 aa14.26□□□□□ -0.13
PRPF39-204ENST00000553605 ZNF564Q8TBZ8 553 aaPredicted RBP14.26□□□□□ -0.13
PRPF39-204ENST00000553605 PRICKLE1Q96MT3 831 aaPredicted RBP14.26□□□□□ -0.13
PRPF39-204ENST00000553605 NOX5Q96PH1 765 aa14.26□□□□□ -0.13
PRPF39-204ENST00000553605 TNMDQ9H2S6 317 aa14.26□□□□□ -0.13
PRPF39-204ENST00000553605 PREBQ9HCU5 417 aa14.26□□□□□ -0.13
PRPF39-204ENST00000553605 ABCC13Q9NSE7 274 aa14.26□□□□□ -0.13
PRPF39-204ENST00000553605 SALL4Q9UJQ4 1053 aa14.26□□□□□ -0.13
PRPF39-204ENST00000553605 ACSL6Q9UKU0 697 aa14.26□□□□□ -0.13
PRPF39-204ENST00000553605 PCDHGA4Q9Y5G9 962 aa14.26□□□□□ -0.13
PRPF39-204ENST00000553605 CREBBPQ92793 2442 aa14.26□□□□□ -0.13
PRPF39-204ENST00000553605 HLA-DRAP01903 254 aa14.25□□□□□ -0.13
PRPF39-204ENST00000553605 LIPCP11150 499 aa14.25□□□□□ -0.13
PRPF39-204ENST00000553605 AKT2P31751 481 aa14.25□□□□□ -0.13
PRPF39-204ENST00000553605 CCR10P46092 362 aa14.25□□□□□ -0.13
PRPF39-204ENST00000553605 STK19P49842 368 aaPredicted RBP14.25□□□□□ -0.13
PRPF39-204ENST00000553605 PDX1P52945 283 aa14.25□□□□□ -0.13
PRPF39-204ENST00000553605 CLDN2P57739 230 aa14.25□□□□□ -0.13
PRPF39-204ENST00000553605 CYP4F2P78329 520 aa14.25□□□□□ -0.13
PRPF39-204ENST00000553605 NR0B2Q15466 257 aa14.25□□□□□ -0.13
PRPF39-204ENST00000553605 MANEAQ5SRI9 462 aa14.25□□□□□ -0.13
PRPF39-204ENST00000553605 PERM1Q5SV97 790 aa14.25□□□□□ -0.13
PRPF39-204ENST00000553605 NUGGCQ68CJ6 796 aa14.25□□□□□ -0.13
PRPF39-204ENST00000553605 APCDD1Q8J025 514 aa14.25□□□□□ -0.13
PRPF39-204ENST00000553605 FBXO39Q8N4B4 442 aa14.25□□□□□ -0.13
PRPF39-204ENST00000553605 ZNF548Q8NEK5 533 aaPredicted RBP14.25□□□□□ -0.13
PRPF39-204ENST00000553605 OR8D1Q8WZ84 308 aa14.25□□□□□ -0.13
PRPF39-204ENST00000553605 AZIN2Q96A70 460 aa14.25□□□□□ -0.13
PRPF39-204ENST00000553605 MYEOVQ96EZ4 313 aa14.25□□□□□ -0.13
PRPF39-204ENST00000553605 LIN37Q96GY3 246 aaPredicted RBP14.25□□□□□ -0.13
PRPF39-204ENST00000553605 DDX50Q9BQ39 737 aaKnown RBP14.25□□□□□ -0.13
PRPF39-204ENST00000553605 IMPG2Q9BZV3 1241 aa14.25□□□□□ -0.13
PRPF39-204ENST00000553605 APOBEC3GQ9HC16 384 aaKnown RBP14.25□□□□□ -0.13
PRPF39-204ENST00000553605 FZD3Q9NPG1 666 aa14.25□□□□□ -0.13
PRPF39-204ENST00000553605 SEPT10Q9P0V9 454 aa14.25□□□□□ -0.13
PRPF39-204ENST00000553605 CSNK1G3Q9Y6M4 447 aa14.25□□□□□ -0.13
PRPF39-204ENST00000553605 A0A1W2PQU0 124 aa14.24□□□□□ -0.13
PRPF39-204ENST00000553605 YJEFN3A6XGL0 299 aa14.24□□□□□ -0.13
PRPF39-204ENST00000553605 E7ENQ6 273 aa14.24□□□□□ -0.13
PRPF39-204ENST00000553605 MUSKO15146 869 aa14.24□□□□□ -0.13
PRPF39-204ENST00000553605 CASC3O15234 703 aaKnown RBP14.24□□□□□ -0.13
PRPF39-204ENST00000553605 IGLV3-27P01718 113 aa14.24□□□□□ -0.13
PRPF39-204ENST00000553605 HNRNPA2B1P22626 353 aaKnown RBP14.24□□□□□ -0.13
PRPF39-204ENST00000553605 UGT1A5P35504 534 aa14.24□□□□□ -0.13
PRPF39-204ENST00000553605 TAS2R38P59533 333 aa14.24□□□□□ -0.13
PRPF39-204ENST00000553605 EIF3IQ13347 325 aaKnown RBP14.24□□□□□ -0.13
PRPF39-204ENST00000553605 MORC3Q14149 939 aa14.24□□□□□ -0.13
PRPF39-204ENST00000553605 SPIDRQ14159 915 aa14.24□□□□□ -0.13
PRPF39-204ENST00000553605 DRAP1Q14919 205 aaPredicted RBP14.24□□□□□ -0.13
PRPF39-204ENST00000553605 KNOP1Q1ED39 458 aaKnown RBP14.24□□□□□ -0.13
PRPF39-204ENST00000553605 NADSYN1Q6IA69 706 aa14.24□□□□□ -0.13
PRPF39-204ENST00000553605 NEK5Q6P3R8 708 aa14.24□□□□□ -0.13
PRPF39-204ENST00000553605 Q6ZSR6 202 aa14.24□□□□□ -0.13
PRPF39-204ENST00000553605 RAB11FIP2Q7L804 512 aa14.24□□□□□ -0.13
PRPF39-204ENST00000553605 ABI3BPQ7Z7G0 1075 aa14.24□□□□□ -0.13
PRPF39-204ENST00000553605 DCP2Q8IU60 420 aaKnown RBP14.24□□□□□ -0.13
PRPF39-204ENST00000553605 CFAP52Q8N1V2 620 aa14.24□□□□□ -0.13
PRPF39-204ENST00000553605 ANKRD52Q8NB46 1076 aa14.24□□□□□ -0.13
PRPF39-204ENST00000553605 IPO9Q96P70 1041 aaKnown RBP14.24□□□□□ -0.13
PRPF39-204ENST00000553605 ADNPQ9H2P0 1102 aa14.24□□□□□ -0.13
PRPF39-204ENST00000553605 LRRC4Q9HBW1 653 aa14.24□□□□□ -0.13
PRPF39-204ENST00000553605 KBTBD4Q9NVX7 518 aa14.24□□□□□ -0.13
PRPF39-204ENST00000553605 PPM1HQ9ULR3 514 aa14.24□□□□□ -0.13
PRPF39-204ENST00000553605 C1QTNF3-AMACRE9PGA6 284 aa14.23□□□□□ -0.13
PRPF39-204ENST00000553605 H3BM21 787 aa14.23□□□□□ -0.13
PRPF39-204ENST00000553605 TULP2O00295 520 aa14.23□□□□□ -0.13
PRPF39-204ENST00000553605 IKBKBO14920 756 aa14.23□□□□□ -0.13
PRPF39-204ENST00000553605 LUC7L3O95232 432 aaKnown RBP14.23□□□□□ -0.13
PRPF39-204ENST00000553605 CSF2P04141 144 aa14.23□□□□□ -0.13
PRPF39-204ENST00000553605 CASRP41180 1078 aa14.23□□□□□ -0.13
PRPF39-204ENST00000553605 AMPD3Q01432 767 aa14.23□□□□□ -0.13
PRPF39-204ENST00000553605 NCAPHQ15003 741 aa14.23□□□□□ -0.13
PRPF39-204ENST00000553605 ZNF284Q2VY69 593 aa14.23□□□□□ -0.13
PRPF39-204ENST00000553605 DEFB133Q30KQ1 61 aa14.23□□□□□ -0.13
PRPF39-204ENST00000553605 GCNT7Q6ZNI0 430 aa14.23□□□□□ -0.13
PRPF39-204ENST00000553605 VASH2Q86V25 355 aa14.23□□□□□ -0.13
PRPF39-204ENST00000553605 FAM174AQ8TBP5 190 aa14.23□□□□□ -0.13
PRPF39-204ENST00000553605 FRS2Q8WU20 508 aa14.23□□□□□ -0.13
PRPF39-204ENST00000553605 HTR3CQ8WXA8 447 aa14.23□□□□□ -0.13
PRPF39-204ENST00000553605 FUCA2Q9BTY2 467 aa14.23□□□□□ -0.13
PRPF39-204ENST00000553605 BACH2Q9BYV9 841 aa14.23□□□□□ -0.13
PRPF39-204ENST00000553605 NIF3L1Q9GZT8 377 aa14.23□□□□□ -0.13
PRPF39-204ENST00000553605 SYNDIG1Q9H7V2 258 aa14.23□□□□□ -0.13
PRPF39-204ENST00000553605 EPB41L5Q9HCM4 733 aa14.23□□□□□ -0.13
PRPF39-204ENST00000553605 NYNRINQ9P2P1 1898 aaKnown RBP14.23□□□□□ -0.13
PRPF39-204ENST00000553605 A6NNZ2 444 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms