RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 GOLGA8MH3BSY2 632 aa7.49□□□□□ -1.21
ATXN3-221ENST00000553498 TM9SF1O15321 606 aa7.49□□□□□ -1.21
ATXN3-221ENST00000553498 PQBP1O60828 265 aaKnown RBP7.49□□□□□ -1.21
ATXN3-221ENST00000553498 KRT38O76015 456 aa7.49□□□□□ -1.21
ATXN3-221ENST00000553498 ALDH1A2O94788 518 aa7.49□□□□□ -1.21
ATXN3-221ENST00000553498 LRIG2O94898 1065 aa7.49□□□□□ -1.21
ATXN3-221ENST00000553498 ZWINTO95229 277 aa7.49□□□□□ -1.21
ATXN3-221ENST00000553498 METTL18O95568 372 aa7.49□□□□□ -1.21
ATXN3-221ENST00000553498 EFEMP2O95967 443 aa7.49□□□□□ -1.21
ATXN3-221ENST00000553498 APOEP02649 317 aa7.49□□□□□ -1.21
ATXN3-221ENST00000553498 INHBAP08476 426 aa7.49□□□□□ -1.21
ATXN3-221ENST00000553498 HAPLN1P10915 354 aaPredicted RBP7.49□□□□□ -1.21
ATXN3-221ENST00000553498 CPB1P15086 417 aa7.49□□□□□ -1.21
ATXN3-221ENST00000553498 PGAM1P18669 254 aa7.49□□□□□ -1.21
ATXN3-221ENST00000553498 KRT15P19012 456 aa7.49□□□□□ -1.21
ATXN3-221ENST00000553498 YWHAQP27348 245 aa7.49□□□□□ -1.21
ATXN3-221ENST00000553498 GARSP41250 739 aaKnown RBP7.49□□□□□ -1.21
ATXN3-221ENST00000553498 ELK3P41970 407 aa7.49□□□□□ -1.21
ATXN3-221ENST00000553498 PPP3CCP48454 512 aa7.49□□□□□ -1.21
ATXN3-221ENST00000553498 IFNAR2P48551 515 aa7.49□□□□□ -1.21
ATXN3-221ENST00000553498 SLC11A1P49279 550 aa7.49□□□□□ -1.21
ATXN3-221ENST00000553498 ALDH7A1P49419 539 aaKnown RBP7.49□□□□□ -1.21
ATXN3-221ENST00000553498 NDST2P52849 883 aa7.49□□□□□ -1.21
ATXN3-221ENST00000553498 MLLT6P55198 1093 aaPredicted RBP7.49□□□□□ -1.21
ATXN3-221ENST00000553498 PITX1P78337 314 aaPredicted RBP7.49□□□□□ -1.21
ATXN3-221ENST00000553498 CREMQ03060 361 aa7.49□□□□□ -1.21
ATXN3-221ENST00000553498 SRSF11Q05519 484 aaKnown RBP7.49□□□□□ -1.21
ATXN3-221ENST00000553498 WASHC5Q12768 1159 aa7.49□□□□□ -1.21
ATXN3-221ENST00000553498 FASTKD3Q14CZ7 662 aaKnown RBP7.49□□□□□ -1.21
ATXN3-221ENST00000553498 TEAD4Q15561 434 aa7.49□□□□□ -1.21
ATXN3-221ENST00000553498 ANO4Q32M45 955 aa7.49□□□□□ -1.21
ATXN3-221ENST00000553498 USP41Q3LFD5 358 aa7.49□□□□□ -1.21
ATXN3-221ENST00000553498 CRTC2Q53ET0 693 aaPredicted RBP7.49□□□□□ -1.21
ATXN3-221ENST00000553498 MANEALQ5VSG8 457 aa7.49□□□□□ -1.21
ATXN3-221ENST00000553498 ZNF385CQ66K41 422 aaPredicted RBP7.49□□□□□ -1.21
ATXN3-221ENST00000553498 TPGS2Q68CL5 300 aa7.49□□□□□ -1.21
ATXN3-221ENST00000553498 KLHDC10Q6PID8 442 aa7.49□□□□□ -1.21
ATXN3-221ENST00000553498 RGS9BPQ6ZS82 235 aa7.49□□□□□ -1.21
ATXN3-221ENST00000553498 CPLX4Q7Z7G2 160 aa7.49□□□□□ -1.21
ATXN3-221ENST00000553498 SCD5Q86SK9 330 aa7.49□□□□□ -1.21
ATXN3-221ENST00000553498 LINC00523Q86TU6 105 aa7.49□□□□□ -1.21
ATXN3-221ENST00000553498 CAND1Q86VP6 1230 aaKnown RBP7.49□□□□□ -1.21
ATXN3-221ENST00000553498 LRRC6Q86X45 466 aa7.49□□□□□ -1.21
ATXN3-221ENST00000553498 CCDC117Q8IWD4 279 aaPredicted RBP7.49□□□□□ -1.21
ATXN3-221ENST00000553498 SCN4BQ8IWT1 228 aa7.49□□□□□ -1.21
ATXN3-221ENST00000553498 ANKS4BQ8N8V4 417 aa7.49□□□□□ -1.21
ATXN3-221ENST00000553498 ATP6V0D2Q8N8Y2 350 aa7.49□□□□□ -1.21
ATXN3-221ENST00000553498 CCNYQ8ND76 341 aa7.49□□□□□ -1.21
ATXN3-221ENST00000553498 SCAMP5Q8TAC9 235 aa7.49□□□□□ -1.21
ATXN3-221ENST00000553498 UHMK1Q8TAS1 419 aaKnown RBP7.49□□□□□ -1.21
ATXN3-221ENST00000553498 GSDMBQ8TAX9 411 aa7.49□□□□□ -1.21
ATXN3-221ENST00000553498 CCDC110Q8TBZ0 833 aa7.49□□□□□ -1.21
ATXN3-221ENST00000553498 FBF1Q8TES7 1133 aa7.49□□□□□ -1.21
ATXN3-221ENST00000553498 ZNF473Q8WTR7 871 aaKnown RBP7.49□□□□□ -1.21
ATXN3-221ENST00000553498 SLC44A1Q8WWI5 657 aa7.49□□□□□ -1.21
ATXN3-221ENST00000553498 EDEM1Q92611 657 aa7.49□□□□□ -1.21
ATXN3-221ENST00000553498 CDKL2Q92772 493 aa7.49□□□□□ -1.21
ATXN3-221ENST00000553498 SLC39A13Q96H72 371 aa7.49□□□□□ -1.21
ATXN3-221ENST00000553498 TMEM209Q96SK2 561 aa7.49□□□□□ -1.21
ATXN3-221ENST00000553498 PAFAH2Q99487 392 aa7.49□□□□□ -1.21
ATXN3-221ENST00000553498 TTLL2Q9BWV7 592 aa7.49□□□□□ -1.21
ATXN3-221ENST00000553498 GBA3Q9H227 469 aa7.49□□□□□ -1.21
ATXN3-221ENST00000553498 C10orf88Q9H8K7 445 aa7.49□□□□□ -1.21
ATXN3-221ENST00000553498 DNAJC17Q9NVM6 304 aaKnown RBP7.49□□□□□ -1.21
ATXN3-221ENST00000553498 MARCH5Q9NX47 278 aa7.49□□□□□ -1.21
ATXN3-221ENST00000553498 ABI2Q9NYB9 513 aaPredicted RBP7.49□□□□□ -1.21
ATXN3-221ENST00000553498 MTRRQ9UBK8 725 aa7.49□□□□□ -1.21
ATXN3-221ENST00000553498 DNAJB4Q9UDY4 337 aa7.49□□□□□ -1.21
ATXN3-221ENST00000553498 ZC3H7BQ9UGR2 993 aaKnown RBP7.49□□□□□ -1.21
ATXN3-221ENST00000553498 AAR2Q9Y312 384 aaKnown RBP7.49□□□□□ -1.21
ATXN3-221ENST00000553498 MGAMO43451 1857 aa7.49□□□□□ -1.21
ATXN3-221ENST00000553498 MYH10P35580 1976 aa7.48□□□□□ -1.21
ATXN3-221ENST00000553498 SYNJ2BP-COX16A0A087WUM0 186 aa7.48□□□□□ -1.21
ATXN3-221ENST00000553498 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.48□□□□□ -1.21
ATXN3-221ENST00000553498 A0A1W2PQH9 124 aa7.48□□□□□ -1.21
ATXN3-221ENST00000553498 MTMR11A4FU01 709 aa7.48□□□□□ -1.21
ATXN3-221ENST00000553498 TBKBP1A7MCY6 615 aa7.48□□□□□ -1.21
ATXN3-221ENST00000553498 POC1B-GALNT4F8VUJ3 575 aa7.48□□□□□ -1.21
ATXN3-221ENST00000553498 FAM72CH0Y354 149 aa7.48□□□□□ -1.21
ATXN3-221ENST00000553498 MATN3O15232 486 aa7.48□□□□□ -1.21
ATXN3-221ENST00000553498 CACNG3O60359 315 aa7.48□□□□□ -1.21
ATXN3-221ENST00000553498 B4GALT3O60512 393 aa7.48□□□□□ -1.21
ATXN3-221ENST00000553498 PAGE1O75459 146 aa7.48□□□□□ -1.21
ATXN3-221ENST00000553498 ANXA9O76027 345 aa7.48□□□□□ -1.21
ATXN3-221ENST00000553498 AP2A1O95782 977 aa7.48□□□□□ -1.21
ATXN3-221ENST00000553498 POLBP06746 335 aa7.48□□□□□ -1.21
ATXN3-221ENST00000553498 ZDHHC11BP0C7U3 371 aa7.48□□□□□ -1.21
ATXN3-221ENST00000553498 SRGAP2BP0DMP2 458 aa7.48□□□□□ -1.21
ATXN3-221ENST00000553498 VAV1P15498 845 aa7.48□□□□□ -1.21
ATXN3-221ENST00000553498 IBSPP21815 317 aaPredicted RBP7.48□□□□□ -1.21
ATXN3-221ENST00000553498 GCAP28676 217 aa7.48□□□□□ -1.21
ATXN3-221ENST00000553498 NPY2RP49146 381 aa7.48□□□□□ -1.21
ATXN3-221ENST00000553498 HNRNPH2P55795 449 aaKnown RBP7.48□□□□□ -1.21
ATXN3-221ENST00000553498 TBX4P57082 545 aa7.48□□□□□ -1.21
ATXN3-221ENST00000553498 TNK2Q07912 1038 aa7.48□□□□□ -1.21
ATXN3-221ENST00000553498 FAAP100Q0VG06 881 aa7.48□□□□□ -1.21
ATXN3-221ENST00000553498 SPARCL1Q14515 664 aa7.48□□□□□ -1.21
ATXN3-221ENST00000553498 ITIH4Q14624 930 aa7.48□□□□□ -1.21
ATXN3-221ENST00000553498 TMED2Q15363 201 aa7.48□□□□□ -1.21
ATXN3-221ENST00000553498 TRIP4Q15650 581 aaPredicted RBP7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms