RNA–Protein interactions for RNA: ENST00000552590.6

PRIM1-208, Transcript of DNA primase subunit 1, humanhuman

TSL 5

Gene PRIM1, Length 1,459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-208ENST00000552590 TBC1D3Q8IZP1 549 aaPredicted RBP8.65□□□□□ -1.02
PRIM1-208ENST00000552590 BRF1Q92994 677 aa8.65□□□□□ -1.02
PRIM1-208ENST00000552590 OMDQ99983 421 aa8.65□□□□□ -1.02
PRIM1-208ENST00000552590 STRADBQ9C0K7 418 aa8.65□□□□□ -1.02
PRIM1-208ENST00000552590 RSPH9Q9H1X1 276 aaPredicted RBP8.65□□□□□ -1.02
PRIM1-208ENST00000552590 PHTF1Q9UMS5 762 aa8.65□□□□□ -1.02
PRIM1-208ENST00000552590 PLA2G4CQ9UP65 541 aa8.65□□□□□ -1.02
PRIM1-208ENST00000552590 C2CD2Q9Y426 696 aa8.65□□□□□ -1.02
PRIM1-208ENST00000552590 LOXL2Q9Y4K0 774 aa8.65□□□□□ -1.02
PRIM1-208ENST00000552590 MYH11P35749 1972 aa8.65□□□□□ -1.02
PRIM1-208ENST00000552590 ZNF106Q9H2Y7 1883 aaKnown RBP8.65□□□□□ -1.03
PRIM1-208ENST00000552590 DUX1O43812 170 aa8.64□□□□□ -1.03
PRIM1-208ENST00000552590 TLR5O60602 858 aa8.64□□□□□ -1.03
PRIM1-208ENST00000552590 C4BPAP04003 597 aaKnown RBP8.64□□□□□ -1.03
PRIM1-208ENST00000552590 C8BP07358 591 aa8.64□□□□□ -1.03
PRIM1-208ENST00000552590 PDGFRBP09619 1106 aa8.64□□□□□ -1.03
PRIM1-208ENST00000552590 POLR2BP30876 1174 aaKnown RBP8.64□□□□□ -1.03
PRIM1-208ENST00000552590 PNPLA4P41247 253 aa8.64□□□□□ -1.03
PRIM1-208ENST00000552590 ACOT2P49753 483 aa8.64□□□□□ -1.03
PRIM1-208ENST00000552590 TUBP50607 506 aa8.64□□□□□ -1.03
PRIM1-208ENST00000552590 IRAK1P51617 712 aa8.64□□□□□ -1.03
PRIM1-208ENST00000552590 MAPK10P53779 464 aa8.64□□□□□ -1.03
PRIM1-208ENST00000552590 ADPRHP54922 357 aa8.64□□□□□ -1.03
PRIM1-208ENST00000552590 DHX8Q14562 1220 aaKnown RBP8.64□□□□□ -1.03
PRIM1-208ENST00000552590 CST6Q15828 149 aa8.64□□□□□ -1.03
PRIM1-208ENST00000552590 DEFB109BQ30KR1 87 aa8.64□□□□□ -1.03
PRIM1-208ENST00000552590 TTC22Q5TAA0 569 aa8.64□□□□□ -1.03
PRIM1-208ENST00000552590 Q6ZUG5 572 aa8.64□□□□□ -1.03
PRIM1-208ENST00000552590 ASB18Q6ZVZ8 466 aa8.64□□□□□ -1.03
PRIM1-208ENST00000552590 PRPF39Q86UA1 669 aaKnown RBP8.64□□□□□ -1.03
PRIM1-208ENST00000552590 SMC5Q8IY18 1101 aa8.64□□□□□ -1.03
PRIM1-208ENST00000552590 NUP93Q8N1F7 819 aa8.64□□□□□ -1.03
PRIM1-208ENST00000552590 OR6B3Q8NGW1 331 aa8.64□□□□□ -1.03
PRIM1-208ENST00000552590 APOBEC4Q8WW27 367 aaKnown RBP8.64□□□□□ -1.03
PRIM1-208ENST00000552590 OVCA2Q8WZ82 227 aa8.64□□□□□ -1.03
PRIM1-208ENST00000552590 NKD1Q969G9 470 aa8.64□□□□□ -1.03
PRIM1-208ENST00000552590 PPP1R13BQ96KQ4 1090 aa8.64□□□□□ -1.03
PRIM1-208ENST00000552590 C5orf34Q96MH7 638 aa8.64□□□□□ -1.03
PRIM1-208ENST00000552590 MDFIQ99750 246 aa8.64□□□□□ -1.03
PRIM1-208ENST00000552590 CCDC3Q9BQI4 270 aa8.64□□□□□ -1.03
PRIM1-208ENST00000552590 MSTO1Q9BUK6 570 aa8.64□□□□□ -1.03
PRIM1-208ENST00000552590 KCND3Q9UK17 655 aa8.64□□□□□ -1.03
PRIM1-208ENST00000552590 SCML1Q9UN30 329 aa8.64□□□□□ -1.03
PRIM1-208ENST00000552590 AGAP1Q9UPQ3 857 aa8.64□□□□□ -1.03
PRIM1-208ENST00000552590 SNX9Q9Y5X1 595 aa8.64□□□□□ -1.03
PRIM1-208ENST00000552590 NSD1Q96L73 2696 aaPredicted RBP8.64□□□□□ -1.03
PRIM1-208ENST00000552590 ARHGEF17Q96PE2 2063 aaPredicted RBP8.64□□□□□ -1.03
PRIM1-208ENST00000552590 SLC12A8A0AV02 714 aa8.64□□□□□ -1.03
PRIM1-208ENST00000552590 ZNF891A8MT65 544 aaPredicted RBP8.64□□□□□ -1.03
PRIM1-208ENST00000552590 CCER2I3L3R5 266 aa8.64□□□□□ -1.03
PRIM1-208ENST00000552590 NTN3O00634 580 aaPredicted RBP8.64□□□□□ -1.03
PRIM1-208ENST00000552590 NEMFO60524 1076 aa8.64□□□□□ -1.03
PRIM1-208ENST00000552590 ZDHHC11BP0C7U3 371 aa8.64□□□□□ -1.03
PRIM1-208ENST00000552590 DRD2P14416 443 aa8.64□□□□□ -1.03
PRIM1-208ENST00000552590 LIG4P49917 911 aa8.64□□□□□ -1.03
PRIM1-208ENST00000552590 NR0B2Q15466 257 aa8.64□□□□□ -1.03
PRIM1-208ENST00000552590 SOWAHAQ2M3V2 549 aa8.64□□□□□ -1.03
PRIM1-208ENST00000552590 MDH1BQ5I0G3 518 aa8.64□□□□□ -1.03
PRIM1-208ENST00000552590 HS2ST1Q7LGA3 356 aa8.64□□□□□ -1.03
PRIM1-208ENST00000552590 XYLT1Q86Y38 959 aa8.64□□□□□ -1.03
PRIM1-208ENST00000552590 MMAAQ8IVH4 418 aaKnown RBP8.64□□□□□ -1.03
PRIM1-208ENST00000552590 AADATQ8N5Z0 425 aa8.64□□□□□ -1.03
PRIM1-208ENST00000552590 PLPP7Q8NBV4 271 aa8.64□□□□□ -1.03
PRIM1-208ENST00000552590 WDR48Q8TAF3 677 aa8.64□□□□□ -1.03
PRIM1-208ENST00000552590 MYOCQ99972 504 aa8.64□□□□□ -1.03
PRIM1-208ENST00000552590 NTPCRQ9BSD7 190 aaKnown RBP8.64□□□□□ -1.03
PRIM1-208ENST00000552590 RUSC1Q9BVN2 902 aa8.64□□□□□ -1.03
PRIM1-208ENST00000552590 TMEM60Q9H2L4 133 aa8.64□□□□□ -1.03
PRIM1-208ENST00000552590 ASB7Q9H672 318 aa8.64□□□□□ -1.03
PRIM1-208ENST00000552590 ETNK1Q9HBU6 452 aa8.64□□□□□ -1.03
PRIM1-208ENST00000552590 PCMTD2Q9NV79 361 aa8.64□□□□□ -1.03
PRIM1-208ENST00000552590 CDH9Q9ULB4 789 aa8.64□□□□□ -1.03
PRIM1-208ENST00000552590 FZD4Q9ULV1 537 aa8.64□□□□□ -1.03
PRIM1-208ENST00000552590 RNF114Q9Y508 228 aa8.64□□□□□ -1.03
PRIM1-208ENST00000552590 TNRC6AQ8NDV7 1962 aaKnown RBP8.63□□□□□ -1.03
PRIM1-208ENST00000552590 A0A0B4J269 797 aa8.63□□□□□ -1.03
PRIM1-208ENST00000552590 M0R082 166 aa8.63□□□□□ -1.03
PRIM1-208ENST00000552590 CLDN5O00501 218 aa8.63□□□□□ -1.03
PRIM1-208ENST00000552590 MDM4O15151 490 aa8.63□□□□□ -1.03
PRIM1-208ENST00000552590 RTN3O95197 1032 aaPredicted RBP8.63□□□□□ -1.03
PRIM1-208ENST00000552590 DEXIO95424 95 aa8.63□□□□□ -1.03
PRIM1-208ENST00000552590 ITGB3P05106 788 aa8.63□□□□□ -1.03
PRIM1-208ENST00000552590 PLCG1P19174 1290 aa8.63□□□□□ -1.03
PRIM1-208ENST00000552590 CDC25AP30304 524 aa8.63□□□□□ -1.03
PRIM1-208ENST00000552590 SLC8A1P32418 973 aa8.63□□□□□ -1.03
PRIM1-208ENST00000552590 GOLGA8FQ08AF8 430 aa8.63□□□□□ -1.03
PRIM1-208ENST00000552590 GOLGA8DPQ0D2H9 430 aa8.63□□□□□ -1.03
PRIM1-208ENST00000552590 SEPT6Q14141 434 aa8.63□□□□□ -1.03
PRIM1-208ENST00000552590 MAPRE1Q15691 268 aaKnown RBP8.63□□□□□ -1.03
PRIM1-208ENST00000552590 DEFB133Q30KQ1 61 aa8.63□□□□□ -1.03
PRIM1-208ENST00000552590 ZC3H3Q8IXZ2 948 aaKnown RBP8.63□□□□□ -1.03
PRIM1-208ENST00000552590 IL22RA1Q8N6P7 574 aa8.63□□□□□ -1.03
PRIM1-208ENST00000552590 TOP6BLQ8N6T0 577 aa8.63□□□□□ -1.03
PRIM1-208ENST00000552590 ZNF417Q8TAU3 575 aa8.63□□□□□ -1.03
PRIM1-208ENST00000552590 MYCBPAPQ8TBZ2 947 aa8.63□□□□□ -1.03
PRIM1-208ENST00000552590 KBTBD7Q8WVZ9 684 aa8.63□□□□□ -1.03
PRIM1-208ENST00000552590 FAM84AQ96KN4 292 aa8.63□□□□□ -1.03
PRIM1-208ENST00000552590 ZNF587Q96SQ5 575 aaPredicted RBP8.63□□□□□ -1.03
PRIM1-208ENST00000552590 CALN1Q9BXU9 219 aa8.63□□□□□ -1.03
PRIM1-208ENST00000552590 ZNF518BQ9C0D4 1074 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms