RNA–Protein interactions for RNA: ENST00000552448.1

TUBA1C-209, Transcript of tubulin alpha 1c, humanhuman

TSL 3

Gene TUBA1C, Length 1,800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1C-209ENST00000552448 AXLP30530 894 aa11.28□□□□□ -0.6
TUBA1C-209ENST00000552448 HOXC8P31273 242 aa11.28□□□□□ -0.6
TUBA1C-209ENST00000552448 ZNF143P52747 638 aaPredicted RBP11.28□□□□□ -0.6
TUBA1C-209ENST00000552448 SLC25A3Q00325 362 aa11.28□□□□□ -0.6
TUBA1C-209ENST00000552448 PURAQ00577 322 aaKnown RBP11.28□□□□□ -0.6
TUBA1C-209ENST00000552448 MYBPC1Q00872 1141 aa11.28□□□□□ -0.6
TUBA1C-209ENST00000552448 STILQ15468 1287 aa11.28□□□□□ -0.6
TUBA1C-209ENST00000552448 CHI3L2Q15782 390 aa11.28□□□□□ -0.6
TUBA1C-209ENST00000552448 PKDCCQ504Y2 493 aa11.28□□□□□ -0.6
TUBA1C-209ENST00000552448 HP1BP3Q5SSJ5 553 aaPredicted RBP11.28□□□□□ -0.6
TUBA1C-209ENST00000552448 TRNP1Q6NT89 227 aa11.28□□□□□ -0.6
TUBA1C-209ENST00000552448 LRRC52Q8N7C0 313 aa11.28□□□□□ -0.6
TUBA1C-209ENST00000552448 TRIML2Q8N7C3 387 aa11.28□□□□□ -0.6
TUBA1C-209ENST00000552448 SCAIQ8N9R8 606 aa11.28□□□□□ -0.6
TUBA1C-209ENST00000552448 TSPAN14Q8NG11 270 aa11.28□□□□□ -0.6
TUBA1C-209ENST00000552448 HM13Q8TCT9 377 aa11.28□□□□□ -0.6
TUBA1C-209ENST00000552448 CPT1BQ92523 772 aa11.28□□□□□ -0.6
TUBA1C-209ENST00000552448 C18orf25Q96B23 403 aaPredicted RBP11.28□□□□□ -0.6
TUBA1C-209ENST00000552448 HSPBAP1Q96EW2 488 aa11.28□□□□□ -0.6
TUBA1C-209ENST00000552448 PRPF18Q99633 342 aaKnown RBP11.28□□□□□ -0.6
TUBA1C-209ENST00000552448 CNPY3Q9BT09 278 aa11.28□□□□□ -0.6
TUBA1C-209ENST00000552448 MTG1Q9BT17 334 aaPredicted RBP11.28□□□□□ -0.6
TUBA1C-209ENST00000552448 NXF3Q9H4D5 531 aaKnown RBP11.28□□□□□ -0.6
TUBA1C-209ENST00000552448 TRPV5Q9NQA5 729 aa11.28□□□□□ -0.6
TUBA1C-209ENST00000552448 ASNSD1Q9NWL6 643 aa11.28□□□□□ -0.6
TUBA1C-209ENST00000552448 SAE1Q9UBE0 346 aaPredicted RBP11.28□□□□□ -0.6
TUBA1C-209ENST00000552448 STK39Q9UEW8 545 aa11.28□□□□□ -0.6
TUBA1C-209ENST00000552448 SNX9Q9Y5X1 595 aa11.28□□□□□ -0.6
TUBA1C-209ENST00000552448 SCN10AQ9Y5Y9 1956 aa11.28□□□□□ -0.6
TUBA1C-209ENST00000552448 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.27□□□□□ -0.61
TUBA1C-209ENST00000552448 C17orf102A2RUQ5 167 aa11.27□□□□□ -0.61
TUBA1C-209ENST00000552448 CST8O60676 142 aa11.27□□□□□ -0.61
TUBA1C-209ENST00000552448 KRT38O76015 456 aa11.27□□□□□ -0.61
TUBA1C-209ENST00000552448 RECQL4O94761 1208 aa11.27□□□□□ -0.61
TUBA1C-209ENST00000552448 BPGMP07738 259 aa11.27□□□□□ -0.61
TUBA1C-209ENST00000552448 ATP6V1B1P15313 513 aa11.27□□□□□ -0.61
TUBA1C-209ENST00000552448 L1CAMP32004 1257 aa11.27□□□□□ -0.61
TUBA1C-209ENST00000552448 CRHR1P34998 444 aa11.27□□□□□ -0.61
TUBA1C-209ENST00000552448 EPHB1P54762 984 aa11.27□□□□□ -0.61
TUBA1C-209ENST00000552448 ESRRGP62508 458 aa11.27□□□□□ -0.61
TUBA1C-209ENST00000552448 DYNLT1P63172 113 aa11.27□□□□□ -0.61
TUBA1C-209ENST00000552448 PRKCZQ05513 592 aa11.27□□□□□ -0.61
TUBA1C-209ENST00000552448 FAAP100Q0VG06 881 aa11.27□□□□□ -0.61
TUBA1C-209ENST00000552448 ADGRE1Q14246 886 aa11.27□□□□□ -0.61
TUBA1C-209ENST00000552448 EFTUD2Q15029 972 aaKnown RBP eCLIP11.27□□□□□ -0.615e-8■■■■■ 33.1
TUBA1C-209ENST00000552448 TAF5Q15542 800 aa11.27□□□□□ -0.61
TUBA1C-209ENST00000552448 GOLGA7BQ2TAP0 167 aa11.27□□□□□ -0.61
TUBA1C-209ENST00000552448 PPP1R26Q5T8A7 1209 aaPredicted RBP11.27□□□□□ -0.61
TUBA1C-209ENST00000552448 SH3PXD2AQ5TCZ1 1133 aa11.27□□□□□ -0.61
TUBA1C-209ENST00000552448 C9orf57Q5W0N0 161 aa11.27□□□□□ -0.61
TUBA1C-209ENST00000552448 TAF2Q6P1X5 1199 aa11.27□□□□□ -0.61
TUBA1C-209ENST00000552448 FAM183BPQ6ZVS7 135 aa11.27□□□□□ -0.61
TUBA1C-209ENST00000552448 CYP4V2Q6ZWL3 525 aaPredicted RBP11.27□□□□□ -0.61
TUBA1C-209ENST00000552448 LPCAT2Q7L5N7 544 aa11.27□□□□□ -0.61
TUBA1C-209ENST00000552448 TTC30AQ86WT1 665 aa11.27□□□□□ -0.61
TUBA1C-209ENST00000552448 TICAM1Q8IUC6 712 aa11.27□□□□□ -0.61
TUBA1C-209ENST00000552448 C7orf31Q8N865 590 aa11.27□□□□□ -0.61
TUBA1C-209ENST00000552448 TRPV1Q8NER1 839 aa11.27□□□□□ -0.61
TUBA1C-209ENST00000552448 BEST2Q8NFU1 509 aa11.27□□□□□ -0.61
TUBA1C-209ENST00000552448 PIWIL2Q8TC59 973 aaKnown RBP11.27□□□□□ -0.61
TUBA1C-209ENST00000552448 ACTL9Q8TC94 416 aa11.27□□□□□ -0.61
TUBA1C-209ENST00000552448 GIPC3Q8TF64 312 aa11.27□□□□□ -0.61
TUBA1C-209ENST00000552448 TMEM40Q8WWA1 233 aa11.27□□□□□ -0.61
TUBA1C-209ENST00000552448 DNAJB3Q8WWF6 145 aa11.27□□□□□ -0.61
TUBA1C-209ENST00000552448 PIWIL1Q96J94 861 aaKnown RBP11.27□□□□□ -0.61
TUBA1C-209ENST00000552448 KLF6Q99612 283 aaPredicted RBP11.27□□□□□ -0.61
TUBA1C-209ENST00000552448 RTKNQ9BST9 563 aa11.27□□□□□ -0.61
TUBA1C-209ENST00000552448 TMEM121Q9BTD3 319 aa11.27□□□□□ -0.61
TUBA1C-209ENST00000552448 ARHGAP39Q9C0H5 1083 aa11.27□□□□□ -0.61
TUBA1C-209ENST00000552448 SUN2Q9UH99 717 aa11.27□□□□□ -0.61
TUBA1C-209ENST00000552448 PCSK1NQ9UHG2 260 aa11.27□□□□□ -0.61
TUBA1C-209ENST00000552448 USP18Q9UMW8 372 aa11.27□□□□□ -0.61
TUBA1C-209ENST00000552448 GABRQQ9UN88 632 aa11.27□□□□□ -0.61
TUBA1C-209ENST00000552448 H3BSA7 217 aa11.26□□□□□ -0.61
TUBA1C-209ENST00000552448 PIK3R2O00459 728 aa11.26□□□□□ -0.61
TUBA1C-209ENST00000552448 TREHO43280 583 aa11.26□□□□□ -0.61
TUBA1C-209ENST00000552448 AOC2O75106 756 aa11.26□□□□□ -0.61
TUBA1C-209ENST00000552448 ENDOD1O94919 500 aa11.26□□□□□ -0.61
TUBA1C-209ENST00000552448 PROCP04070 461 aa11.26□□□□□ -0.61
TUBA1C-209ENST00000552448 CCDC130P13994 396 aa11.26□□□□□ -0.61
TUBA1C-209ENST00000552448 ALOX15P16050 662 aaPredicted RBP11.26□□□□□ -0.61
TUBA1C-209ENST00000552448 GPD1P21695 349 aa11.26□□□□□ -0.61
TUBA1C-209ENST00000552448 CNTFP26441 200 aa11.26□□□□□ -0.61
TUBA1C-209ENST00000552448 PCSK6P29122 969 aa11.26□□□□□ -0.61
TUBA1C-209ENST00000552448 TTKP33981 857 aa11.26□□□□□ -0.61
TUBA1C-209ENST00000552448 SERPINB9P50453 376 aa11.26□□□□□ -0.61
TUBA1C-209ENST00000552448 OTUD4Q01804 1114 aaKnown RBP11.26□□□□□ -0.61
TUBA1C-209ENST00000552448 DPYSQ14117 519 aa11.26□□□□□ -0.61
TUBA1C-209ENST00000552448 SNX17Q15036 470 aa11.26□□□□□ -0.61
TUBA1C-209ENST00000552448 ARHGEF6Q15052 776 aa11.26□□□□□ -0.61
TUBA1C-209ENST00000552448 BCL2A1Q16548 175 aa11.26□□□□□ -0.61
TUBA1C-209ENST00000552448 ZNF829Q3KNS6 432 aaPredicted RBP11.26□□□□□ -0.61
TUBA1C-209ENST00000552448 CCDC153Q494R4 210 aa11.26□□□□□ -0.61
TUBA1C-209ENST00000552448 GLRA4Q5JXX5 417 aa11.26□□□□□ -0.61
TUBA1C-209ENST00000552448 FNBP1LQ5T0N5 605 aa11.26□□□□□ -0.61
TUBA1C-209ENST00000552448 METTL21CQ5VZV1 264 aa11.26□□□□□ -0.61
TUBA1C-209ENST00000552448 OR6B2Q6IFH4 312 aa11.26□□□□□ -0.61
TUBA1C-209ENST00000552448 PMF1Q6P1K2 205 aa11.26□□□□□ -0.61
TUBA1C-209ENST00000552448 C16orf89Q6UX73 402 aa11.26□□□□□ -0.61
TUBA1C-209ENST00000552448 ACOT1Q86TX2 421 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms