RNA–Protein interactions for RNA: ENST00000552215.5

CHPT1-208, Transcript of choline phosphotransferase 1, humanhuman

TSL 1 (best)

Gene CHPT1, Length 4,342 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-208ENST00000552215 ZC3H7BQ9UGR2 993 aaKnown RBP8.36□□□□□ -1.07
CHPT1-208ENST00000552215 AGO1Q9UL18 857 aaKnown RBP8.36□□□□□ -1.07
CHPT1-208ENST00000552215 PCDHB9Q9Y5E1 797 aa8.36□□□□□ -1.07
CHPT1-208ENST00000552215 APOC4-APOC2K7ER74 178 aa8.35□□□□□ -1.07
CHPT1-208ENST00000552215 LIASO43766 372 aa8.35□□□□□ -1.07
CHPT1-208ENST00000552215 GJB3O75712 270 aa8.35□□□□□ -1.07
CHPT1-208ENST00000552215 PRAMEF12O95522 483 aa8.35□□□□□ -1.07
CHPT1-208ENST00000552215 AGTP01019 485 aa8.35□□□□□ -1.07
CHPT1-208ENST00000552215 APOC2P02655 101 aa8.35□□□□□ -1.07
CHPT1-208ENST00000552215 FECHP22830 423 aa8.35□□□□□ -1.07
CHPT1-208ENST00000552215 MGAT1P26572 445 aa8.35□□□□□ -1.07
CHPT1-208ENST00000552215 PCK1P35558 622 aa8.35□□□□□ -1.07
CHPT1-208ENST00000552215 CHKAP35790 457 aa8.35□□□□□ -1.07
CHPT1-208ENST00000552215 CCR2P41597 374 aa8.35□□□□□ -1.07
CHPT1-208ENST00000552215 TFF2Q03403 129 aa8.35□□□□□ -1.07
CHPT1-208ENST00000552215 LRRC14Q15048 493 aa8.35□□□□□ -1.07
CHPT1-208ENST00000552215 ANKRD20A2Q5SQ80 823 aa8.35□□□□□ -1.07
CHPT1-208ENST00000552215 ANKRD20A1Q5TYW2 823 aa8.35□□□□□ -1.07
CHPT1-208ENST00000552215 ANKRD20A3Q5VUR7 823 aa8.35□□□□□ -1.07
CHPT1-208ENST00000552215 SLC8B1Q6J4K2 584 aa8.35□□□□□ -1.07
CHPT1-208ENST00000552215 PTAR1Q7Z6K3 402 aaPredicted RBP8.35□□□□□ -1.07
CHPT1-208ENST00000552215 MYLK4Q86YV6 388 aaPredicted RBP8.35□□□□□ -1.07
CHPT1-208ENST00000552215 SRRM1Q8IYB3 904 aaKnown RBP8.35□□□□□ -1.07
CHPT1-208ENST00000552215 GPATCH11Q8N954 259 aa8.35□□□□□ -1.07
CHPT1-208ENST00000552215 FGF13Q92913 245 aa8.35□□□□□ -1.07
CHPT1-208ENST00000552215 SCYL1Q96KG9 808 aa8.35□□□□□ -1.07
CHPT1-208ENST00000552215 TTC25Q96NG3 672 aa8.35□□□□□ -1.07
CHPT1-208ENST00000552215 ZBP1Q9H171 429 aa8.35□□□□□ -1.07
CHPT1-208ENST00000552215 L2HGDHQ9H9P8 463 aa8.35□□□□□ -1.07
CHPT1-208ENST00000552215 ZNF197O14709 1029 aa8.35□□□□□ -1.07
CHPT1-208ENST00000552215 CLASP2O75122 1294 aaKnown RBP8.35□□□□□ -1.07
CHPT1-208ENST00000552215 PCDH8O95206 1070 aa8.35□□□□□ -1.07
CHPT1-208ENST00000552215 TIE1P35590 1138 aa8.35□□□□□ -1.07
CHPT1-208ENST00000552215 CSKP41240 450 aa8.35□□□□□ -1.07
CHPT1-208ENST00000552215 PXNP49023 591 aaPredicted RBP8.35□□□□□ -1.07
CHPT1-208ENST00000552215 PMS2P54278 862 aa8.35□□□□□ -1.07
CHPT1-208ENST00000552215 DLX2Q07687 328 aaPredicted RBP8.35□□□□□ -1.07
CHPT1-208ENST00000552215 SLC10A7Q0GE19 358 aa8.35□□□□□ -1.07
CHPT1-208ENST00000552215 CCNG2Q16589 344 aa8.35□□□□□ -1.07
CHPT1-208ENST00000552215 SLC5A9Q2M3M2 681 aa8.35□□□□□ -1.07
CHPT1-208ENST00000552215 CCDC157Q569K6 752 aa8.35□□□□□ -1.07
CHPT1-208ENST00000552215 PIK3R6Q5UE93 754 aa8.35□□□□□ -1.07
CHPT1-208ENST00000552215 ANKRD22Q5VYY1 191 aa8.35□□□□□ -1.07
CHPT1-208ENST00000552215 CCNI2Q6ZMN8 369 aaPredicted RBP8.35□□□□□ -1.07
CHPT1-208ENST00000552215 RD3Q7Z3Z2 195 aa8.35□□□□□ -1.07
CHPT1-208ENST00000552215 LDB1Q86U70 411 aaPredicted RBP8.35□□□□□ -1.07
CHPT1-208ENST00000552215 DEFB119Q8N690 84 aa8.35□□□□□ -1.07
CHPT1-208ENST00000552215 SMIM14Q96QK8 99 aa8.35□□□□□ -1.07
CHPT1-208ENST00000552215 ZMYND15Q9H091 742 aa8.35□□□□□ -1.07
CHPT1-208ENST00000552215 SCUBE2Q9NQ36 999 aa8.35□□□□□ -1.07
CHPT1-208ENST00000552215 DYRK4Q9NR20 520 aa8.35□□□□□ -1.07
CHPT1-208ENST00000552215 THG1LQ9NWX6 298 aaKnown RBP8.35□□□□□ -1.07
CHPT1-208ENST00000552215 LMCD1Q9NZU5 365 aa8.35□□□□□ -1.07
CHPT1-208ENST00000552215 SLCO3A1Q9UIG8 710 aa8.35□□□□□ -1.07
CHPT1-208ENST00000552215 INVSQ9Y283 1065 aa8.35□□□□□ -1.07
CHPT1-208ENST00000552215 RWDD3Q9Y3V2 267 aa8.35□□□□□ -1.07
CHPT1-208ENST00000552215 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.35□□□□□ -1.07
CHPT1-208ENST00000552215 RPS6KL1Q9Y6S9 549 aa8.35□□□□□ -1.07
CHPT1-208ENST00000552215 CNOT1A5YKK6 2376 aaKnown RBP8.35□□□□□ -1.07
CHPT1-208ENST00000552215 STC2O76061 302 aa8.35□□□□□ -1.07
CHPT1-208ENST00000552215 MMP13P45452 471 aa8.35□□□□□ -1.07
CHPT1-208ENST00000552215 PSEN1P49768 467 aa8.35□□□□□ -1.07
CHPT1-208ENST00000552215 SLC10A2Q12908 348 aaPredicted RBP8.35□□□□□ -1.07
CHPT1-208ENST00000552215 GEN1Q17RS7 908 aa8.35□□□□□ -1.07
CHPT1-208ENST00000552215 PCGF5Q86SE9 256 aa8.35□□□□□ -1.07
CHPT1-208ENST00000552215 TTC7BQ86TV6 843 aa8.35□□□□□ -1.07
CHPT1-208ENST00000552215 ZDHHC14Q8IZN3 488 aa8.35□□□□□ -1.07
CHPT1-208ENST00000552215 KCTD13Q8WZ19 329 aa8.35□□□□□ -1.07
CHPT1-208ENST00000552215 VPS11Q9H270 941 aa8.35□□□□□ -1.07
CHPT1-208ENST00000552215 UBA2Q9UBT2 640 aaPredicted RBP8.35□□□□□ -1.07
CHPT1-208ENST00000552215 FARP1Q9Y4F1 1045 aaPredicted RBP8.35□□□□□ -1.07
CHPT1-208ENST00000552215 SZT2Q5T011 3432 aa8.35□□□□□ -1.07
CHPT1-208ENST00000552215 CABIN1Q9Y6J0 2220 aa8.35□□□□□ -1.07
CHPT1-208ENST00000552215 MT-CO1P00395 513 aa8.35□□□□□ -1.07
CHPT1-208ENST00000552215 UGT2B4P06133 528 aa8.35□□□□□ -1.07
CHPT1-208ENST00000552215 POLR2EP19388 210 aaKnown RBP8.35□□□□□ -1.07
CHPT1-208ENST00000552215 OAS2P29728 719 aaKnown RBP8.35□□□□□ -1.07
CHPT1-208ENST00000552215 PTPN9P43378 593 aa8.35□□□□□ -1.07
CHPT1-208ENST00000552215 BIRC2Q13490 618 aa8.35□□□□□ -1.07
CHPT1-208ENST00000552215 FASTKD3Q14CZ7 662 aaKnown RBP8.35□□□□□ -1.07
CHPT1-208ENST00000552215 TRIP4Q15650 581 aaPredicted RBP8.35□□□□□ -1.07
CHPT1-208ENST00000552215 ZKSCAN8Q15776 578 aaPredicted RBP8.35□□□□□ -1.07
CHPT1-208ENST00000552215 PPP2R5EQ16537 467 aa8.35□□□□□ -1.07
CHPT1-208ENST00000552215 C4orf33Q8N1A6 199 aa8.35□□□□□ -1.07
CHPT1-208ENST00000552215 FBXO36Q8NEA4 188 aa8.35□□□□□ -1.07
CHPT1-208ENST00000552215 AGR3Q8TD06 166 aa8.35□□□□□ -1.07
CHPT1-208ENST00000552215 BACE2Q9Y5Z0 518 aa8.35□□□□□ -1.07
CHPT1-208ENST00000552215 TCRBV7S3A2A0A539 114 aa8.34□□□□□ -1.07
CHPT1-208ENST00000552215 ARSAP15289 507 aa8.34□□□□□ -1.07
CHPT1-208ENST00000552215 MSH2P43246 934 aa8.34□□□□□ -1.07
CHPT1-208ENST00000552215 MLLT6P55198 1093 aaPredicted RBP8.34□□□□□ -1.07
CHPT1-208ENST00000552215 BMPR2Q13873 1038 aa8.34□□□□□ -1.07
CHPT1-208ENST00000552215 PTPRCAPQ14761 206 aa8.34□□□□□ -1.07
CHPT1-208ENST00000552215 UBXN2BQ14CS0 331 aa8.34□□□□□ -1.07
CHPT1-208ENST00000552215 C6orf118Q5T5N4 469 aa8.34□□□□□ -1.07
CHPT1-208ENST00000552215 MROH9Q5TGP6 573 aa8.34□□□□□ -1.07
CHPT1-208ENST00000552215 BBS12Q6ZW61 710 aa8.34□□□□□ -1.07
CHPT1-208ENST00000552215 NPWQ8N729 165 aa8.34□□□□□ -1.07
CHPT1-208ENST00000552215 CFAP61Q8NHU2 1237 aa8.34□□□□□ -1.07
CHPT1-208ENST00000552215 SGF29Q96ES7 293 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms