RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 OXCT2Q9BYC2 517 aaPredicted RBP11.77□□□□□ -0.53
RAB5C-208ENST00000551338 NOL6Q9H6R4 1146 aaKnown RBP11.77□□□□□ -0.53
RAB5C-208ENST00000551338 OLA1Q9NTK5 396 aaKnown RBP11.77□□□□□ -0.53
RAB5C-208ENST00000551338 MKS1Q9NXB0 559 aa11.77□□□□□ -0.53
RAB5C-208ENST00000551338 MPP6Q9NZW5 540 aa11.77□□□□□ -0.53
RAB5C-208ENST00000551338 TBX21Q9UL17 535 aa11.77□□□□□ -0.53
RAB5C-208ENST00000551338 USP15Q9Y4E8 981 aaPredicted RBP11.77□□□□□ -0.53
RAB5C-208ENST00000551338 MRPL42Q9Y6G3 142 aaKnown RBP11.77□□□□□ -0.53
RAB5C-208ENST00000551338 CCT8L1PA6NM43 557 aa11.76□□□□□ -0.53
RAB5C-208ENST00000551338 SLC38A8A6NNN8 435 aa11.76□□□□□ -0.53
RAB5C-208ENST00000551338 PSMD3O43242 534 aa11.76□□□□□ -0.53
RAB5C-208ENST00000551338 EDF1O60869 148 aaKnown RBP11.76□□□□□ -0.53
RAB5C-208ENST00000551338 KRT37O76014 449 aa11.76□□□□□ -0.53
RAB5C-208ENST00000551338 HLA-DQB2P05538 268 aa11.76□□□□□ -0.53
RAB5C-208ENST00000551338 SLC2A3P11169 496 aa11.76□□□□□ -0.53
RAB5C-208ENST00000551338 RPL10AP62906 217 aaKnown RBP11.76□□□□□ -0.53
RAB5C-208ENST00000551338 MGAT5Q09328 741 aa11.76□□□□□ -0.53
RAB5C-208ENST00000551338 DUSP4Q13115 394 aa11.76□□□□□ -0.53
RAB5C-208ENST00000551338 NAB1Q13506 487 aa11.76□□□□□ -0.53
RAB5C-208ENST00000551338 PSMD5Q16401 504 aa11.76□□□□□ -0.53
RAB5C-208ENST00000551338 CASC4Q6P4E1 433 aa11.76□□□□□ -0.53
RAB5C-208ENST00000551338 CNKSR3Q6P9H4 555 aa11.76□□□□□ -0.53
RAB5C-208ENST00000551338 PACS1Q6VY07 963 aa11.76□□□□□ -0.53
RAB5C-208ENST00000551338 CCDC121Q6ZUS5 278 aa11.76□□□□□ -0.53
RAB5C-208ENST00000551338 FAM47EQ6ZV65 393 aa11.76□□□□□ -0.53
RAB5C-208ENST00000551338 OTOP3Q7RTS5 596 aa11.76□□□□□ -0.53
RAB5C-208ENST00000551338 SPATA21Q7Z572 469 aa11.76□□□□□ -0.53
RAB5C-208ENST00000551338 OTUD6BQ8N6M0 293 aa11.76□□□□□ -0.53
RAB5C-208ENST00000551338 FBXO22Q8NEZ5 403 aa11.76□□□□□ -0.53
RAB5C-208ENST00000551338 GIPC2Q8TF65 315 aa11.76□□□□□ -0.53
RAB5C-208ENST00000551338 CCT6BQ92526 530 aa11.76□□□□□ -0.53
RAB5C-208ENST00000551338 ZNF669Q96BR6 464 aaPredicted RBP11.76□□□□□ -0.53
RAB5C-208ENST00000551338 CERS2Q96G23 380 aa11.76□□□□□ -0.53
RAB5C-208ENST00000551338 TOX2Q96NM4 488 aa11.76□□□□□ -0.53
RAB5C-208ENST00000551338 FCRL5Q96RD9 977 aa11.76□□□□□ -0.53
RAB5C-208ENST00000551338 TTLL2Q9BWV7 592 aa11.76□□□□□ -0.53
RAB5C-208ENST00000551338 CRISPLD2Q9H0B8 497 aa11.76□□□□□ -0.53
RAB5C-208ENST00000551338 LRRC40Q9H9A6 602 aa11.76□□□□□ -0.53
RAB5C-208ENST00000551338 GLOD4Q9HC38 313 aa11.76□□□□□ -0.53
RAB5C-208ENST00000551338 TLR8Q9NR97 1041 aaKnown RBP11.76□□□□□ -0.53
RAB5C-208ENST00000551338 MARCH2Q9P0N8 246 aa11.76□□□□□ -0.53
RAB5C-208ENST00000551338 FNIP2Q9P278 1114 aa11.76□□□□□ -0.53
RAB5C-208ENST00000551338 PRKAG3Q9UGI9 489 aa11.76□□□□□ -0.53
RAB5C-208ENST00000551338 VANGL2Q9ULK5 521 aa11.76□□□□□ -0.53
RAB5C-208ENST00000551338 CDY1Q9Y6F8 540 aa11.76□□□□□ -0.53
RAB5C-208ENST00000551338 HELZP42694 1942 aaKnown RBP11.76□□□□□ -0.53
RAB5C-208ENST00000551338 IGLV3-10A0A075B6K4 115 aa11.75□□□□□ -0.53
RAB5C-208ENST00000551338 SLC12A8A0AV02 714 aa11.75□□□□□ -0.53
RAB5C-208ENST00000551338 MATN3O15232 486 aa11.75□□□□□ -0.53
RAB5C-208ENST00000551338 KRT38O76015 456 aa11.75□□□□□ -0.53
RAB5C-208ENST00000551338 UPP2O95045 317 aa11.75□□□□□ -0.53
RAB5C-208ENST00000551338 TBX18O95935 607 aa11.75□□□□□ -0.53
RAB5C-208ENST00000551338 CCNB1P14635 433 aa11.75□□□□□ -0.53
RAB5C-208ENST00000551338 RHOQP17081 205 aa11.75□□□□□ -0.53
RAB5C-208ENST00000551338 PAPOLAP51003 745 aaKnown RBP11.75□□□□□ -0.53
RAB5C-208ENST00000551338 DNAJC3Q13217 504 aa11.75□□□□□ -0.53
RAB5C-208ENST00000551338 FRG1Q14331 258 aaKnown RBP11.75□□□□□ -0.53
RAB5C-208ENST00000551338 PRPSAP1Q14558 356 aa11.75□□□□□ -0.53
RAB5C-208ENST00000551338 LACTB2Q53H82 288 aaPredicted RBP11.75□□□□□ -0.53
RAB5C-208ENST00000551338 ALFQ53S48 1182 aa11.75□□□□□ -0.53
RAB5C-208ENST00000551338 RNF187Q5TA31 235 aaPredicted RBP11.75□□□□□ -0.53
RAB5C-208ENST00000551338 LGSNQ5TDP6 509 aa11.75□□□□□ -0.53
RAB5C-208ENST00000551338 SLC8B1Q6J4K2 584 aa11.75□□□□□ -0.53
RAB5C-208ENST00000551338 TIGD7Q6NT04 549 aaPredicted RBP11.75□□□□□ -0.53
RAB5C-208ENST00000551338 CES3Q6UWW8 571 aa11.75□□□□□ -0.53
RAB5C-208ENST00000551338 TIFABQ6ZNK6 161 aa11.75□□□□□ -0.53
RAB5C-208ENST00000551338 CDHR3Q6ZTQ4 885 aa11.75□□□□□ -0.53
RAB5C-208ENST00000551338 RASSF3Q86WH2 238 aa11.75□□□□□ -0.53
RAB5C-208ENST00000551338 CHSY1Q86X52 802 aa11.75□□□□□ -0.53
RAB5C-208ENST00000551338 ANKS4BQ8N8V4 417 aa11.75□□□□□ -0.53
RAB5C-208ENST00000551338 LRRC8CQ8TDW0 803 aa11.75□□□□□ -0.53
RAB5C-208ENST00000551338 DIS3LQ8TF46 1054 aaKnown RBP11.75□□□□□ -0.53
RAB5C-208ENST00000551338 ZNF75CPQ92670 426 aaPredicted RBP11.75□□□□□ -0.53
RAB5C-208ENST00000551338 GRAMD1AQ96CP6 724 aa11.75□□□□□ -0.53
RAB5C-208ENST00000551338 MTBPQ96DY7 904 aa11.75□□□□□ -0.53
RAB5C-208ENST00000551338 FCRL3Q96P31 734 aaPredicted RBP11.75□□□□□ -0.53
RAB5C-208ENST00000551338 APOL2Q9BQE5 337 aa11.75□□□□□ -0.53
RAB5C-208ENST00000551338 SLCO1B3Q9NPD5 702 aa11.75□□□□□ -0.53
RAB5C-208ENST00000551338 TMEM248Q9NWD8 314 aa11.75□□□□□ -0.53
RAB5C-208ENST00000551338 UBP1Q9NZI7 540 aa11.75□□□□□ -0.53
RAB5C-208ENST00000551338 BFARQ9NZS9 450 aa11.75□□□□□ -0.53
RAB5C-208ENST00000551338 PPARGC1AQ9UBK2 798 aaKnown RBP11.75□□□□□ -0.53
RAB5C-208ENST00000551338 ZNF212Q9UDV6 495 aa11.75□□□□□ -0.53
RAB5C-208ENST00000551338 BACE2Q9Y5Z0 518 aa11.75□□□□□ -0.53
RAB5C-208ENST00000551338 RPS6KL1Q9Y6S9 549 aa11.75□□□□□ -0.53
RAB5C-208ENST00000551338 ALPK3Q96L96 1907 aa11.75□□□□□ -0.53
RAB5C-208ENST00000551338 ZCWPW2A0A1B0GU75 182 aa11.74□□□□□ -0.53
RAB5C-208ENST00000551338 COPEO14579 308 aa11.74□□□□□ -0.53
RAB5C-208ENST00000551338 CNTN5O94779 1100 aa11.74□□□□□ -0.53
RAB5C-208ENST00000551338 USP1O94782 785 aa11.74□□□□□ -0.53
RAB5C-208ENST00000551338 FSBPO95073 299 aa11.74□□□□□ -0.53
RAB5C-208ENST00000551338 PEX11BO96011 259 aa11.74□□□□□ -0.53
RAB5C-208ENST00000551338 POLBP06746 335 aa11.74□□□□□ -0.53
RAB5C-208ENST00000551338 RPL17P18621 184 aaKnown RBP11.74□□□□□ -0.53
RAB5C-208ENST00000551338 CNTFP26441 200 aa11.74□□□□□ -0.53
RAB5C-208ENST00000551338 NPY2RP49146 381 aa11.74□□□□□ -0.53
RAB5C-208ENST00000551338 RING1Q06587 406 aa11.74□□□□□ -0.53
RAB5C-208ENST00000551338 SEPT7Q16181 437 aaKnown RBP11.74□□□□□ -0.53
RAB5C-208ENST00000551338 USP41Q3LFD5 358 aa11.74□□□□□ -0.53
RAB5C-208ENST00000551338 C10orf120Q5SQS8 335 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms