RNA–Protein interactions for RNA: ENST00000550872.1

CHMP1A-209, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-209ENST00000550872 PRSS33Q8NF86 280 aa16.65■□□□□ 0.26
CHMP1A-209ENST00000550872 OR7D4Q8NG98 312 aa16.65■□□□□ 0.26
CHMP1A-209ENST00000550872 TPCN2Q8NHX9 752 aa16.65■□□□□ 0.26
CHMP1A-209ENST00000550872 PDLIM2Q96JY6 352 aa16.65■□□□□ 0.26
CHMP1A-209ENST00000550872 CALR3Q96L12 384 aaKnown RBP16.65■□□□□ 0.26
CHMP1A-209ENST00000550872 PCDH18Q9HCL0 1135 aa16.65■□□□□ 0.26
CHMP1A-209ENST00000550872 NDFIP2Q9NV92 336 aa16.65■□□□□ 0.26
CHMP1A-209ENST00000550872 CWC15Q9P013 229 aaKnown RBP16.65■□□□□ 0.26
CHMP1A-209ENST00000550872 ALG6Q9Y672 507 aa16.65■□□□□ 0.26
CHMP1A-209ENST00000550872 A0A0U1RQJ8 604 aa16.64■□□□□ 0.25
CHMP1A-209ENST00000550872 WASH4PA8MWX3 477 aa16.64■□□□□ 0.25
CHMP1A-209ENST00000550872 HOXB2P14652 356 aa16.64■□□□□ 0.25
CHMP1A-209ENST00000550872 ERCC2P18074 760 aa16.64■□□□□ 0.25
CHMP1A-209ENST00000550872 IL12RB1P42701 662 aa16.64■□□□□ 0.25
CHMP1A-209ENST00000550872 ECT2LQ008S8 904 aa16.64■□□□□ 0.25
CHMP1A-209ENST00000550872 CRY1Q16526 586 aa16.64■□□□□ 0.25
CHMP1A-209ENST00000550872 PTPRNQ16849 979 aa16.64■□□□□ 0.25
CHMP1A-209ENST00000550872 TSSK4Q6SA08 328 aa16.64■□□□□ 0.25
CHMP1A-209ENST00000550872 SERPINA13PQ6UXR4 307 aa16.64■□□□□ 0.25
CHMP1A-209ENST00000550872 TMEM92Q6UXU6 159 aa16.64■□□□□ 0.25
CHMP1A-209ENST00000550872 POLNQ7Z5Q5 900 aa16.64■□□□□ 0.25
CHMP1A-209ENST00000550872 DAAM2Q86T65 1068 aa16.64■□□□□ 0.25
CHMP1A-209ENST00000550872 MAML2Q8IZL2 1156 aaPredicted RBP16.64■□□□□ 0.25
CHMP1A-209ENST00000550872 ATRIPQ8WXE1 791 aa16.64■□□□□ 0.25
CHMP1A-209ENST00000550872 IRF2BPLQ9H1B7 796 aa16.64■□□□□ 0.25
CHMP1A-209ENST00000550872 GOLPH3Q9H4A6 298 aa16.64■□□□□ 0.25
CHMP1A-209ENST00000550872 PRMT8Q9NR22 394 aaPredicted RBP16.64■□□□□ 0.25
CHMP1A-209ENST00000550872 DONSONQ9NYP3 566 aa16.64■□□□□ 0.25
CHMP1A-209ENST00000550872 TRIM10Q9UDY6 481 aa16.64■□□□□ 0.25
CHMP1A-209ENST00000550872 FBXO4Q9UKT5 387 aa16.64■□□□□ 0.25
CHMP1A-209ENST00000550872 ERVW-1Q9UQF0 538 aa16.64■□□□□ 0.25
CHMP1A-209ENST00000550872 MACROD2A1Z1Q3 448 aa16.63■□□□□ 0.25
CHMP1A-209ENST00000550872 RAMP2O60895 175 aa16.63■□□□□ 0.25
CHMP1A-209ENST00000550872 PAPSS2O95340 614 aaPredicted RBP16.63■□□□□ 0.25
CHMP1A-209ENST00000550872 SRPRAP08240 638 aaKnown RBP16.63■□□□□ 0.25
CHMP1A-209ENST00000550872 HLA-EP13747 358 aa16.63■□□□□ 0.25
CHMP1A-209ENST00000550872 ETFBP38117 255 aa16.63■□□□□ 0.25
CHMP1A-209ENST00000550872 NNMTP40261 264 aa16.63■□□□□ 0.25
CHMP1A-209ENST00000550872 DGKEP52429 567 aa16.63■□□□□ 0.25
CHMP1A-209ENST00000550872 POLD3Q15054 466 aaPredicted RBP16.63■□□□□ 0.25
CHMP1A-209ENST00000550872 PDK2Q15119 407 aa16.63■□□□□ 0.25
CHMP1A-209ENST00000550872 IFI16Q16666 785 aaKnown RBP16.63■□□□□ 0.25
CHMP1A-209ENST00000550872 LRRC38Q5VT99 294 aa16.63■□□□□ 0.25
CHMP1A-209ENST00000550872 IL31Q6EBC2 164 aa16.63■□□□□ 0.25
CHMP1A-209ENST00000550872 C11orf63Q6NUN7 778 aa16.63■□□□□ 0.25
CHMP1A-209ENST00000550872 MAP7D3Q8IWC1 876 aa16.63■□□□□ 0.25
CHMP1A-209ENST00000550872 RHOT1Q8IXI2 618 aa16.63■□□□□ 0.25
CHMP1A-209ENST00000550872 TSTD1Q8NFU3 115 aa16.63■□□□□ 0.25
CHMP1A-209ENST00000550872 ERLEC1Q96DZ1 483 aa16.63■□□□□ 0.25
CHMP1A-209ENST00000550872 RPL10LQ96L21 214 aaKnown RBP16.63■□□□□ 0.25
CHMP1A-209ENST00000550872 HHIPQ96QV1 700 aa16.63■□□□□ 0.25
CHMP1A-209ENST00000550872 PSMB7Q99436 277 aa16.63■□□□□ 0.25
CHMP1A-209ENST00000550872 GABRG3Q99928 467 aa16.63■□□□□ 0.25
CHMP1A-209ENST00000550872 C2orf49Q9BVC5 232 aaPredicted RBP16.63■□□□□ 0.25
CHMP1A-209ENST00000550872 CALN1Q9BXU9 219 aa16.63■□□□□ 0.25
CHMP1A-209ENST00000550872 MAGEH1Q9H213 219 aa16.63■□□□□ 0.25
CHMP1A-209ENST00000550872 ATP13A1Q9HD20 1204 aa16.63■□□□□ 0.25
CHMP1A-209ENST00000550872 POLMQ9NP87 494 aaPredicted RBP16.63■□□□□ 0.25
CHMP1A-209ENST00000550872 KLHL11Q9NVR0 708 aa16.63■□□□□ 0.25
CHMP1A-209ENST00000550872 SLC25A13Q9UJS0 675 aa16.63■□□□□ 0.25
CHMP1A-209ENST00000550872 RAD54BQ9Y620 910 aa16.63■□□□□ 0.25
CHMP1A-209ENST00000550872 NUP205Q92621 2012 aa16.63■□□□□ 0.25
CHMP1A-209ENST00000550872 K7ESF4 209 aa16.62■□□□□ 0.25
CHMP1A-209ENST00000550872 CBX4O00257 560 aa16.62■□□□□ 0.25
CHMP1A-209ENST00000550872 SYNCRIPO60506 623 aaKnown RBP16.62■□□□□ 0.25
CHMP1A-209ENST00000550872 SNAP91O60641 907 aa16.62■□□□□ 0.25
CHMP1A-209ENST00000550872 EPHX1P07099 455 aa16.62■□□□□ 0.25
CHMP1A-209ENST00000550872 CCDC175P0C221 793 aa16.62■□□□□ 0.25
CHMP1A-209ENST00000550872 AMPD1P23109 780 aa16.62■□□□□ 0.25
CHMP1A-209ENST00000550872 PRKCHP24723 683 aa16.62■□□□□ 0.25
CHMP1A-209ENST00000550872 ACVRL1P37023 503 aa16.62■□□□□ 0.25
CHMP1A-209ENST00000550872 STK19P49842 368 aaPredicted RBP16.62■□□□□ 0.25
CHMP1A-209ENST00000550872 ARSEP51690 589 aa16.62■□□□□ 0.25
CHMP1A-209ENST00000550872 YBEYP58557 167 aaPredicted RBP16.62■□□□□ 0.25
CHMP1A-209ENST00000550872 TCF15Q12870 199 aa16.62■□□□□ 0.25
CHMP1A-209ENST00000550872 ENPP2Q13822 863 aa16.62■□□□□ 0.25
CHMP1A-209ENST00000550872 STARD3Q14849 445 aa16.62■□□□□ 0.25
CHMP1A-209ENST00000550872 ZNF354CQ86Y25 554 aa16.62■□□□□ 0.25
CHMP1A-209ENST00000550872 UMODL1-AS1Q8N2C9 162 aa16.62■□□□□ 0.25
CHMP1A-209ENST00000550872 CAMKK1Q8N5S9 505 aa16.62■□□□□ 0.25
CHMP1A-209ENST00000550872 ZNF366Q8N895 744 aa16.62■□□□□ 0.25
CHMP1A-209ENST00000550872 DCAF4L2Q8NA75 395 aa16.62■□□□□ 0.25
CHMP1A-209ENST00000550872 TSC1Q92574 1164 aa16.62■□□□□ 0.25
CHMP1A-209ENST00000550872 ARHGEF2Q92974 986 aaKnown RBP16.62■□□□□ 0.25
CHMP1A-209ENST00000550872 MRGPRX3Q96LB0 322 aa16.62■□□□□ 0.25
CHMP1A-209ENST00000550872 CSPG4P5Q96PW8 444 aa16.62■□□□□ 0.25
CHMP1A-209ENST00000550872 TSGA10Q9BZW7 698 aa16.62■□□□□ 0.25
CHMP1A-209ENST00000550872 RCOR3Q9P2K3 495 aaPredicted RBP16.62■□□□□ 0.25
CHMP1A-209ENST00000550872 SUN2Q9UH99 717 aa16.62■□□□□ 0.25
CHMP1A-209ENST00000550872 VPS51Q9UID3 782 aa16.62■□□□□ 0.25
CHMP1A-209ENST00000550872 SLCO3A1Q9UIG8 710 aa16.62■□□□□ 0.25
CHMP1A-209ENST00000550872 A0A1W2PQF6 199 aa16.61■□□□□ 0.25
CHMP1A-209ENST00000550872 TCRBV21S2A2A0A5A6 115 aa16.61■□□□□ 0.25
CHMP1A-209ENST00000550872 LRRD1A4D1F6 860 aa16.61■□□□□ 0.25
CHMP1A-209ENST00000550872 RASA4BC9J798 803 aa16.61■□□□□ 0.25
CHMP1A-209ENST00000550872 H0Y858 1186 aa16.61■□□□□ 0.25
CHMP1A-209ENST00000550872 ZBTB24O43167 697 aaPredicted RBP16.61■□□□□ 0.25
CHMP1A-209ENST00000550872 RASA4O43374 803 aa16.61■□□□□ 0.25
CHMP1A-209ENST00000550872 KRT86O43790 486 aa16.61■□□□□ 0.25
CHMP1A-209ENST00000550872 ALDH1A2O94788 518 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms