RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 NDUFA5Q16718 116 aa16.07■□□□□ 0.16
RBFOX1-212ENST00000550418 BMT2Q1RMZ1 405 aa16.07■□□□□ 0.16
RBFOX1-212ENST00000550418 EGFL6Q8IUX8 553 aa16.07■□□□□ 0.16
RBFOX1-212ENST00000550418 GMCL1P1Q8NEA9 526 aa16.07■□□□□ 0.16
RBFOX1-212ENST00000550418 HPS1Q92902 700 aa16.07■□□□□ 0.16
RBFOX1-212ENST00000550418 EBNA1BP2Q99848 306 aaKnown RBP16.07■□□□□ 0.16
RBFOX1-212ENST00000550418 DPY30Q9C005 99 aa16.07■□□□□ 0.16
RBFOX1-212ENST00000550418 CDH9Q9ULB4 789 aa16.07■□□□□ 0.16
RBFOX1-212ENST00000550418 ZBTB24O43167 697 aaPredicted RBP16.07■□□□□ 0.16
RBFOX1-212ENST00000550418 TNFRSF21O75509 655 aa16.07■□□□□ 0.16
RBFOX1-212ENST00000550418 PDE9AO76083 593 aa16.07■□□□□ 0.16
RBFOX1-212ENST00000550418 GLP2RO95838 553 aa16.07■□□□□ 0.16
RBFOX1-212ENST00000550418 MAPK1P28482 360 aa16.07■□□□□ 0.16
RBFOX1-212ENST00000550418 MSX2P35548 267 aaPredicted RBP16.07■□□□□ 0.16
RBFOX1-212ENST00000550418 TALDO1P37837 337 aa16.07■□□□□ 0.16
RBFOX1-212ENST00000550418 ANGEL2Q5VTE6 544 aaKnown RBP16.07■□□□□ 0.16
RBFOX1-212ENST00000550418 SCARA3Q6AZY7 606 aa16.07■□□□□ 0.16
RBFOX1-212ENST00000550418 C6orf89Q6UWU4 347 aa16.07■□□□□ 0.16
RBFOX1-212ENST00000550418 SATL1Q86VE3 508 aa16.07■□□□□ 0.16
RBFOX1-212ENST00000550418 RAET1EQ8TD07 263 aa16.07■□□□□ 0.16
RBFOX1-212ENST00000550418 ATG4CQ96DT6 458 aa16.07■□□□□ 0.16
RBFOX1-212ENST00000550418 C7orf26Q96N11 449 aa16.07■□□□□ 0.16
RBFOX1-212ENST00000550418 MAP3K20Q9NYL2 800 aaKnown RBP16.07■□□□□ 0.16
RBFOX1-212ENST00000550418 ZNF70Q9UC06 446 aaPredicted RBP16.07■□□□□ 0.16
RBFOX1-212ENST00000550418 PLLPQ9Y342 182 aa16.07■□□□□ 0.16
RBFOX1-212ENST00000550418 MTF2Q9Y483 593 aaPredicted RBP16.07■□□□□ 0.16
RBFOX1-212ENST00000550418 PCDHA11Q9Y5I1 949 aa16.07■□□□□ 0.16
RBFOX1-212ENST00000550418 C2orf81A6NN90 581 aa16.07■□□□□ 0.16
RBFOX1-212ENST00000550418 CPB1P15086 417 aa16.07■□□□□ 0.16
RBFOX1-212ENST00000550418 TCF7P36402 384 aaPredicted RBP16.07■□□□□ 0.16
RBFOX1-212ENST00000550418 GRIA4P48058 902 aa16.07■□□□□ 0.16
RBFOX1-212ENST00000550418 TTLL9Q3SXZ7 439 aa16.07■□□□□ 0.16
RBFOX1-212ENST00000550418 ANO7Q6IWH7 933 aa16.07■□□□□ 0.16
RBFOX1-212ENST00000550418 RFWD3Q6PCD5 774 aa16.07■□□□□ 0.16
RBFOX1-212ENST00000550418 NPNTQ6UXI9 565 aa16.07■□□□□ 0.16
RBFOX1-212ENST00000550418 KRT73Q86Y46 540 aa16.07■□□□□ 0.16
RBFOX1-212ENST00000550418 HOMEZQ8IX15 550 aa16.07■□□□□ 0.16
RBFOX1-212ENST00000550418 CERS2Q96G23 380 aa16.07■□□□□ 0.16
RBFOX1-212ENST00000550418 PRKD2Q9BZL6 878 aa16.07■□□□□ 0.16
RBFOX1-212ENST00000550418 TRIM39Q9HCM9 518 aa16.07■□□□□ 0.16
RBFOX1-212ENST00000550418 ADAM28Q9UKQ2 775 aa16.07■□□□□ 0.16
RBFOX1-212ENST00000550418 PNMA8BQ9ULN7 279 aaPredicted RBP16.07■□□□□ 0.16
RBFOX1-212ENST00000550418 TPD52L2O43399 206 aaKnown RBP16.06■□□□□ 0.16
RBFOX1-212ENST00000550418 PEX11AO75192 247 aa16.06■□□□□ 0.16
RBFOX1-212ENST00000550418 VPS4BO75351 444 aa16.06■□□□□ 0.16
RBFOX1-212ENST00000550418 ARIH2O95376 493 aa16.06■□□□□ 0.16
RBFOX1-212ENST00000550418 CYP2C9P11712 490 aa16.06■□□□□ 0.16
RBFOX1-212ENST00000550418 PEX2P28328 305 aa16.06■□□□□ 0.16
RBFOX1-212ENST00000550418 CRADDP78560 199 aa16.06■□□□□ 0.16
RBFOX1-212ENST00000550418 PURAQ00577 322 aaKnown RBP16.06■□□□□ 0.16
RBFOX1-212ENST00000550418 KLF10Q13118 480 aa16.06■□□□□ 0.16
RBFOX1-212ENST00000550418 DPYSQ14117 519 aa16.06■□□□□ 0.16
RBFOX1-212ENST00000550418 ATG14Q6ZNE5 492 aa16.06■□□□□ 0.16
RBFOX1-212ENST00000550418 ADHFE1Q8IWW8 467 aa16.06■□□□□ 0.16
RBFOX1-212ENST00000550418 MYO1HQ8N1T3 1032 aa16.06■□□□□ 0.16
RBFOX1-212ENST00000550418 FBXO39Q8N4B4 442 aa16.06■□□□□ 0.16
RBFOX1-212ENST00000550418 ASB2Q96Q27 587 aa16.06■□□□□ 0.16
RBFOX1-212ENST00000550418 ACE2Q9BYF1 805 aaPredicted RBP16.06■□□□□ 0.16
RBFOX1-212ENST00000550418 CLEC4MQ9H2X3 399 aaPredicted RBP16.06■□□□□ 0.16
RBFOX1-212ENST00000550418 DKK3Q9UBP4 350 aa16.06■□□□□ 0.16
RBFOX1-212ENST00000550418 SPATA2Q9UM82 520 aa16.06■□□□□ 0.16
RBFOX1-212ENST00000550418 ANKRD26Q9UPS8 1709 aa16.06■□□□□ 0.16
RBFOX1-212ENST00000550418 DHRS12A0PJE2 317 aa16.06■□□□□ 0.16
RBFOX1-212ENST00000550418 FAM25AB3EWG3 89 aa16.06■□□□□ 0.16
RBFOX1-212ENST00000550418 FAM25CB3EWG5 89 aa16.06■□□□□ 0.16
RBFOX1-212ENST00000550418 FAM25GB3EWG6 89 aa16.06■□□□□ 0.16
RBFOX1-212ENST00000550418 LSM1O15116 133 aaKnown RBP16.06■□□□□ 0.16
RBFOX1-212ENST00000550418 SLC2A4P14672 509 aa16.06■□□□□ 0.16
RBFOX1-212ENST00000550418 TKTP29401 623 aaKnown RBP16.06■□□□□ 0.16
RBFOX1-212ENST00000550418 GJA8P48165 433 aa16.06■□□□□ 0.16
RBFOX1-212ENST00000550418 GSSP48637 474 aa16.06■□□□□ 0.16
RBFOX1-212ENST00000550418 EVX2Q03828 476 aa16.06■□□□□ 0.16
RBFOX1-212ENST00000550418 DDX39BQ13838 428 aaKnown RBP16.06■□□□□ 0.16
RBFOX1-212ENST00000550418 TIMM50Q3ZCQ8 353 aa16.06■□□□□ 0.16
RBFOX1-212ENST00000550418 FOPNLQ96NB1 174 aa16.06■□□□□ 0.16
RBFOX1-212ENST00000550418 ZNF570Q96NI8 536 aa16.06■□□□□ 0.16
RBFOX1-212ENST00000550418 WDR12Q9GZL7 423 aaKnown RBP16.06■□□□□ 0.16
RBFOX1-212ENST00000550418 HPS4Q9NQG7 708 aa16.06■□□□□ 0.16
RBFOX1-212ENST00000550418 ERAP1Q9NZ08 941 aa16.06■□□□□ 0.16
RBFOX1-212ENST00000550418 GRHL1Q9NZI5 618 aa16.06■□□□□ 0.16
RBFOX1-212ENST00000550418 TRHDEQ9UKU6 1024 aa16.06■□□□□ 0.16
RBFOX1-212ENST00000550418 BARX2Q9UMQ3 279 aaPredicted RBP16.06■□□□□ 0.16
RBFOX1-212ENST00000550418 DUSP12Q9UNI6 340 aa16.06■□□□□ 0.16
RBFOX1-212ENST00000550418 LOC100506127A0A0U1RQW1 187 aa16.06■□□□□ 0.16
RBFOX1-212ENST00000550418 EFCAB10A6NFE3 127 aa16.06■□□□□ 0.16
RBFOX1-212ENST00000550418 TGFB1I1O43294 461 aa16.06■□□□□ 0.16
RBFOX1-212ENST00000550418 PLA2G6O60733 806 aa16.06■□□□□ 0.16
RBFOX1-212ENST00000550418 KRT6BP04259 564 aa16.06■□□□□ 0.16
RBFOX1-212ENST00000550418 ADRB2P07550 413 aa16.06■□□□□ 0.16
RBFOX1-212ENST00000550418 ITGA2BP08514 1039 aa16.06■□□□□ 0.16
RBFOX1-212ENST00000550418 STAG3L1P0CL83 205 aa16.06■□□□□ 0.16
RBFOX1-212ENST00000550418 KRT6CP48668 564 aa16.06■□□□□ 0.16
RBFOX1-212ENST00000550418 RPL7AP62424 266 aaKnown RBP16.06■□□□□ 0.16
RBFOX1-212ENST00000550418 USP4Q13107 963 aa16.06■□□□□ 0.16
RBFOX1-212ENST00000550418 FAM228AQ86W67 206 aa16.06■□□□□ 0.16
RBFOX1-212ENST00000550418 SLC44A1Q8WWI5 657 aa16.06■□□□□ 0.16
RBFOX1-212ENST00000550418 ZNF317Q96PQ6 595 aaPredicted RBP16.06■□□□□ 0.16
RBFOX1-212ENST00000550418 ADAM30Q9UKF2 790 aa16.06■□□□□ 0.16
RBFOX1-212ENST00000550418 ARIH1Q9Y4X5 557 aaPredicted RBP16.06■□□□□ 0.16
RBFOX1-212ENST00000550418 DNAJB2P25686 324 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms