RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 KPNA1P52294 538 aaPredicted RBP9.13□□□□□ -0.95
TMEM116-209ENST00000550020 MPP3Q13368 585 aa9.13□□□□□ -0.95
TMEM116-209ENST00000550020 FSCBQ5H9T9 825 aa9.13□□□□□ -0.95
TMEM116-209ENST00000550020 N4BP2L1Q5TBK1 243 aaPredicted RBP9.13□□□□□ -0.95
TMEM116-209ENST00000550020 FAM72AQ5TYM5 149 aa9.13□□□□□ -0.95
TMEM116-209ENST00000550020 FAM72DQ6L9T8 149 aa9.13□□□□□ -0.95
TMEM116-209ENST00000550020 BHLHA9Q7RTU4 235 aa9.13□□□□□ -0.95
TMEM116-209ENST00000550020 STRA8Q7Z7C7 330 aa9.13□□□□□ -0.95
TMEM116-209ENST00000550020 KCNMB4Q86W47 210 aa9.13□□□□□ -0.95
TMEM116-209ENST00000550020 FAM72BQ86X60 149 aa9.13□□□□□ -0.95
TMEM116-209ENST00000550020 ARID3BQ8IVW6 561 aaPredicted RBP9.13□□□□□ -0.95
TMEM116-209ENST00000550020 KIRREL3Q8IZU9 778 aa9.13□□□□□ -0.95
TMEM116-209ENST00000550020 CCDC33Q8N5R6 958 aa9.13□□□□□ -0.95
TMEM116-209ENST00000550020 PIWIL2Q8TC59 973 aaKnown RBP9.13□□□□□ -0.95
TMEM116-209ENST00000550020 GLT1D1Q96MS3 346 aa9.13□□□□□ -0.95
TMEM116-209ENST00000550020 RILPQ96NA2 401 aa9.13□□□□□ -0.95
TMEM116-209ENST00000550020 AGAP3Q96P47 875 aa9.13□□□□□ -0.95
TMEM116-209ENST00000550020 RTP3Q9BQQ7 232 aa9.13□□□□□ -0.95
TMEM116-209ENST00000550020 TSEN34Q9BSV6 310 aaKnown RBP9.13□□□□□ -0.95
TMEM116-209ENST00000550020 FAM167BQ9BTA0 163 aa9.13□□□□□ -0.95
TMEM116-209ENST00000550020 KIFC1Q9BW19 673 aa9.13□□□□□ -0.95
TMEM116-209ENST00000550020 TBC1D10AQ9BXI6 508 aa9.13□□□□□ -0.95
TMEM116-209ENST00000550020 MAGEB5Q9BZ81 275 aa9.13□□□□□ -0.95
TMEM116-209ENST00000550020 UBE2OQ9C0C9 1292 aaKnown RBP9.13□□□□□ -0.95
TMEM116-209ENST00000550020 RETREG1Q9H6L5 497 aa9.13□□□□□ -0.95
TMEM116-209ENST00000550020 MRM3Q9HC36 420 aaKnown RBP9.13□□□□□ -0.95
TMEM116-209ENST00000550020 CD248Q9HCU0 757 aa9.13□□□□□ -0.95
TMEM116-209ENST00000550020 C20orf96Q9NUD7 363 aaPredicted RBP9.13□□□□□ -0.95
TMEM116-209ENST00000550020 MRGBPQ9NV56 204 aa9.13□□□□□ -0.95
TMEM116-209ENST00000550020 IPO11Q9UI26 975 aaKnown RBP9.13□□□□□ -0.95
TMEM116-209ENST00000550020 TLR6Q9Y2C9 796 aa9.13□□□□□ -0.95
TMEM116-209ENST00000550020 HBS1LQ9Y450 684 aaKnown RBP9.13□□□□□ -0.95
TMEM116-209ENST00000550020 HMX2A2RU54 273 aa9.12□□□□□ -0.95
TMEM116-209ENST00000550020 MEIS3P2A8K0S8 358 aa9.12□□□□□ -0.95
TMEM116-209ENST00000550020 WASH4PA8MWX3 477 aa9.12□□□□□ -0.95
TMEM116-209ENST00000550020 FAM155AB1AL88 458 aaPredicted RBP9.12□□□□□ -0.95
TMEM116-209ENST00000550020 SPECC1L-ADORA2AF8WAN1 911 aa9.12□□□□□ -0.95
TMEM116-209ENST00000550020 SLCO1B7G3V0H7 640 aa9.12□□□□□ -0.95
TMEM116-209ENST00000550020 DFFAO00273 331 aa9.12□□□□□ -0.95
TMEM116-209ENST00000550020 HOXA2O43364 376 aa9.12□□□□□ -0.95
TMEM116-209ENST00000550020 UGT1A9O60656 530 aa9.12□□□□□ -0.95
TMEM116-209ENST00000550020 CIB2O75838 187 aa9.12□□□□□ -0.95
TMEM116-209ENST00000550020 RTN3O95197 1032 aaPredicted RBP9.12□□□□□ -0.95
TMEM116-209ENST00000550020 JCHAINP01591 159 aa9.12□□□□□ -0.95
TMEM116-209ENST00000550020 PROCP04070 461 aa9.12□□□□□ -0.95
TMEM116-209ENST00000550020 ALDOAP04075 364 aaKnown RBP9.12□□□□□ -0.95
TMEM116-209ENST00000550020 MYCNP04198 464 aaPredicted RBP9.12□□□□□ -0.95
TMEM116-209ENST00000550020 SERPINA6P08185 405 aa9.12□□□□□ -0.95
TMEM116-209ENST00000550020 T-ENOLP0DO92 83 aa9.12□□□□□ -0.95
TMEM116-209ENST00000550020 ERVK-10P10266 1014 aa9.12□□□□□ -0.95
TMEM116-209ENST00000550020 RALBP11234 206 aa9.12□□□□□ -0.95
TMEM116-209ENST00000550020 MAGEA12P43365 314 aa9.12□□□□□ -0.95
TMEM116-209ENST00000550020 BRCC3P46736 316 aa9.12□□□□□ -0.95
TMEM116-209ENST00000550020 SLC1A6P48664 564 aa9.12□□□□□ -0.95
TMEM116-209ENST00000550020 RENBPP51606 427 aa9.12□□□□□ -0.95
TMEM116-209ENST00000550020 NDST2P52849 883 aa9.12□□□□□ -0.95
TMEM116-209ENST00000550020 SLC5A3P53794 718 aa9.12□□□□□ -0.95
TMEM116-209ENST00000550020 AQP5P55064 265 aa9.12□□□□□ -0.95
TMEM116-209ENST00000550020 CACNB2Q08289 660 aaPredicted RBP9.12□□□□□ -0.95
TMEM116-209ENST00000550020 ELAVL2Q12926 359 aaKnown RBP9.12□□□□□ -0.95
TMEM116-209ENST00000550020 PDE1CQ14123 709 aaPredicted RBP9.12□□□□□ -0.95
TMEM116-209ENST00000550020 ARHGEF6Q15052 776 aa9.12□□□□□ -0.95
TMEM116-209ENST00000550020 NOMO2Q5JPE7 1267 aa9.12□□□□□ -0.95
TMEM116-209ENST00000550020 CFAP157Q5JU67 520 aa9.12□□□□□ -0.95
TMEM116-209ENST00000550020 MBLAC2Q68D91 279 aa9.12□□□□□ -0.95
TMEM116-209ENST00000550020 CCSAPQ6IQ19 270 aaPredicted RBP9.12□□□□□ -0.95
TMEM116-209ENST00000550020 MSANTD2Q6P1R3 559 aa9.12□□□□□ -0.95
TMEM116-209ENST00000550020 CDHR3Q6ZTQ4 885 aa9.12□□□□□ -0.95
TMEM116-209ENST00000550020 ZNF598Q86UK7 904 aaKnown RBP9.12□□□□□ -0.95
TMEM116-209ENST00000550020 TMPRSS6Q8IU80 811 aa9.12□□□□□ -0.95
TMEM116-209ENST00000550020 LMNTD2Q8IXW0 634 aa9.12□□□□□ -0.95
TMEM116-209ENST00000550020 ABI1Q8IZP0 508 aa9.12□□□□□ -0.95
TMEM116-209ENST00000550020 NUP93Q8N1F7 819 aa9.12□□□□□ -0.95
TMEM116-209ENST00000550020 NPWQ8N729 165 aa9.12□□□□□ -0.95
TMEM116-209ENST00000550020 RTL3Q8N8U3 475 aaKnown RBP9.12□□□□□ -0.95
TMEM116-209ENST00000550020 ATP6V0D2Q8N8Y2 350 aa9.12□□□□□ -0.95
TMEM116-209ENST00000550020 ANKLE1Q8NAG6 615 aa9.12□□□□□ -0.95
TMEM116-209ENST00000550020 CALML6Q8TD86 181 aa9.12□□□□□ -0.95
TMEM116-209ENST00000550020 LRRN4Q8WUT4 740 aa9.12□□□□□ -0.95
TMEM116-209ENST00000550020 STMN2Q93045 179 aa9.12□□□□□ -0.95
TMEM116-209ENST00000550020 SLC7A6OSQ96CW6 309 aaPredicted RBP9.12□□□□□ -0.95
TMEM116-209ENST00000550020 PTCD3Q96EY7 689 aaKnown RBP9.12□□□□□ -0.95
TMEM116-209ENST00000550020 IL12RB2Q99665 862 aa9.12□□□□□ -0.95
TMEM116-209ENST00000550020 TBL1YQ9BQ87 522 aa9.12□□□□□ -0.95
TMEM116-209ENST00000550020 FSD1LQ9BXM9 530 aa9.12□□□□□ -0.95
TMEM116-209ENST00000550020 CEP41Q9BYV8 373 aa9.12□□□□□ -0.95
TMEM116-209ENST00000550020 ZCWPW1Q9H0M4 648 aa9.12□□□□□ -0.95
TMEM116-209ENST00000550020 DCLRE1BQ9H816 532 aa9.12□□□□□ -0.95
TMEM116-209ENST00000550020 EBF2Q9HAK2 575 aa9.12□□□□□ -0.95
TMEM116-209ENST00000550020 UGT1A7Q9HAW7 530 aa9.12□□□□□ -0.95
TMEM116-209ENST00000550020 UGT1A10Q9HAW8 530 aa9.12□□□□□ -0.95
TMEM116-209ENST00000550020 UGT1A8Q9HAW9 530 aa9.12□□□□□ -0.95
TMEM116-209ENST00000550020 KCNK13Q9HB14 408 aa9.12□□□□□ -0.95
TMEM116-209ENST00000550020 GLOD4Q9HC38 313 aa9.12□□□□□ -0.95
TMEM116-209ENST00000550020 TMPRSS4Q9NRS4 437 aa9.12□□□□□ -0.95
TMEM116-209ENST00000550020 SNX15Q9NRS6 342 aa9.12□□□□□ -0.95
TMEM116-209ENST00000550020 DNAJC28Q9NX36 388 aa9.12□□□□□ -0.95
TMEM116-209ENST00000550020 PPARGC1AQ9UBK2 798 aaKnown RBP9.12□□□□□ -0.95
TMEM116-209ENST00000550020 TAGLN3Q9UI15 199 aa9.12□□□□□ -0.95
TMEM116-209ENST00000550020 SCML2Q9UQR0 700 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms