RNA–Protein interactions for RNA: ENST00000549970.5

VPS29-207, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-207ENST00000549970 CD27P26842 260 aa16.79■□□□□ 0.28
VPS29-207ENST00000549970 COPB1P53618 953 aaKnown RBP16.79■□□□□ 0.28
VPS29-207ENST00000549970 CDH4P55283 916 aa16.79■□□□□ 0.28
VPS29-207ENST00000549970 KIF19Q2TAC6 998 aa16.79■□□□□ 0.28
VPS29-207ENST00000549970 C5orf22Q49AR2 442 aa16.79■□□□□ 0.28
VPS29-207ENST00000549970 ALFQ53S48 1182 aa16.79■□□□□ 0.28
VPS29-207ENST00000549970 TRNP1Q6NT89 227 aa16.79■□□□□ 0.28
VPS29-207ENST00000549970 ZNF677Q86XU0 584 aa16.79■□□□□ 0.28
VPS29-207ENST00000549970 AADATQ8N5Z0 425 aa16.79■□□□□ 0.28
VPS29-207ENST00000549970 PGAP3Q96FM1 320 aaPredicted RBP16.79■□□□□ 0.28
VPS29-207ENST00000549970 PCMTD1Q96MG8 357 aaPredicted RBP16.79■□□□□ 0.28
VPS29-207ENST00000549970 CFAP57Q96MR6 1250 aa16.79■□□□□ 0.28
VPS29-207ENST00000549970 SPAG5Q96R06 1193 aa16.79■□□□□ 0.28
VPS29-207ENST00000549970 SCNM1Q9BWG6 230 aa16.79■□□□□ 0.28
VPS29-207ENST00000549970 METTL5Q9NRN9 209 aaKnown RBP16.79■□□□□ 0.28
VPS29-207ENST00000549970 TM7SF3Q9NS93 570 aa16.79■□□□□ 0.28
VPS29-207ENST00000549970 ANO10Q9NW15 660 aa16.79■□□□□ 0.28
VPS29-207ENST00000549970 NOCTQ9UK39 431 aaKnown RBP16.79■□□□□ 0.28
VPS29-207ENST00000549970 FZD4Q9ULV1 537 aa16.79■□□□□ 0.28
VPS29-207ENST00000549970 SNX11Q9Y5W9 270 aa16.79■□□□□ 0.28
VPS29-207ENST00000549970 TMEM131Q92545 1883 aa16.78■□□□□ 0.28
VPS29-207ENST00000549970 CEP295Q9C0D2 2601 aa16.78■□□□□ 0.28
VPS29-207ENST00000549970 LRRC72A6NJI9 287 aa16.78■□□□□ 0.28
VPS29-207ENST00000549970 HYAL3O43820 417 aaPredicted RBP16.78■□□□□ 0.28
VPS29-207ENST00000549970 GOT1P17174 413 aa16.78■□□□□ 0.28
VPS29-207ENST00000549970 C5AR1P21730 350 aa16.78■□□□□ 0.28
VPS29-207ENST00000549970 SOX5P35711 763 aa16.78■□□□□ 0.28
VPS29-207ENST00000549970 GRIA4P48058 902 aa16.78■□□□□ 0.28
VPS29-207ENST00000549970 JAM2P57087 298 aa16.78■□□□□ 0.28
VPS29-207ENST00000549970 FMO1Q01740 532 aa16.78■□□□□ 0.28
VPS29-207ENST00000549970 CDR2Q01850 454 aa16.78■□□□□ 0.28
VPS29-207ENST00000549970 HNRNPDQ14103 355 aaKnown RBP16.78■□□□□ 0.28
VPS29-207ENST00000549970 TRIP6Q15654 476 aaKnown RBP16.78■□□□□ 0.28
VPS29-207ENST00000549970 STX1AQ16623 288 aa16.78■□□□□ 0.28
VPS29-207ENST00000549970 LRRC31Q6UY01 552 aa16.78■□□□□ 0.28
VPS29-207ENST00000549970 ADAT2Q7Z6V5 191 aaKnown RBP16.78■□□□□ 0.28
VPS29-207ENST00000549970 PHLDB2Q86SQ0 1253 aa16.78■□□□□ 0.28
VPS29-207ENST00000549970 EMC1Q8N766 993 aa16.78■□□□□ 0.28
VPS29-207ENST00000549970 ANKRD20A12PQ8NF67 263 aa16.78■□□□□ 0.28
VPS29-207ENST00000549970 OR2T34Q8NGX1 318 aa16.78■□□□□ 0.28
VPS29-207ENST00000549970 OR14C36Q8NHC7 312 aa16.78■□□□□ 0.28
VPS29-207ENST00000549970 SETD7Q8WTS6 366 aaKnown RBP16.78■□□□□ 0.28
VPS29-207ENST00000549970 FRS2Q8WU20 508 aa16.78■□□□□ 0.28
VPS29-207ENST00000549970 ORAI3Q9BRQ5 295 aa16.78■□□□□ 0.28
VPS29-207ENST00000549970 OSGEPQ9NPF4 335 aa16.78■□□□□ 0.28
VPS29-207ENST00000549970 ADAMTS1Q9UHI8 967 aa16.78■□□□□ 0.28
VPS29-207ENST00000549970 TMEM59LQ9UK28 342 aa16.78■□□□□ 0.28
VPS29-207ENST00000549970 ANKRD6Q9Y2G4 727 aa16.78■□□□□ 0.28
VPS29-207ENST00000549970 TBC1D30Q9Y2I9 924 aa16.78■□□□□ 0.28
VPS29-207ENST00000549970 SIK3Q9Y2K2 1263 aa16.78■□□□□ 0.28
VPS29-207ENST00000549970 OR51B4Q9Y5P0 310 aa16.78■□□□□ 0.28
VPS29-207ENST00000549970 PLXNA2O75051 1894 aa16.78■□□□□ 0.28
VPS29-207ENST00000549970 ATP9BO43861 1147 aa16.77■□□□□ 0.28
VPS29-207ENST00000549970 BNIP3LO60238 219 aa16.77■□□□□ 0.28
VPS29-207ENST00000549970 CHRNB2P17787 502 aa16.77■□□□□ 0.28
VPS29-207ENST00000549970 RDXP35241 583 aaKnown RBP16.77■□□□□ 0.28
VPS29-207ENST00000549970 METAP1P53582 386 aa16.77■□□□□ 0.28
VPS29-207ENST00000549970 ADPRHP54922 357 aa16.77■□□□□ 0.28
VPS29-207ENST00000549970 ATP11AP98196 1134 aa16.77■□□□□ 0.28
VPS29-207ENST00000549970 MYL5Q02045 173 aa16.77■□□□□ 0.28
VPS29-207ENST00000549970 SYCP1Q15431 976 aa16.77■□□□□ 0.28
VPS29-207ENST00000549970 DLG2Q15700 870 aa16.77■□□□□ 0.28
VPS29-207ENST00000549970 Q6ZVU0 165 aa16.77■□□□□ 0.28
VPS29-207ENST00000549970 TFAP2DQ7Z6R9 452 aa16.77■□□□□ 0.28
VPS29-207ENST00000549970 FAM131BQ86XD5 332 aa16.77■□□□□ 0.28
VPS29-207ENST00000549970 ZNF683Q8IZ20 524 aa16.77■□□□□ 0.28
VPS29-207ENST00000549970 SLC30A5Q8TAD4 765 aa16.77■□□□□ 0.28
VPS29-207ENST00000549970 OR8D1Q8WZ84 308 aa16.77■□□□□ 0.28
VPS29-207ENST00000549970 SLC6A18Q96N87 628 aa16.77■□□□□ 0.28
VPS29-207ENST00000549970 C11orf70Q9BRQ4 267 aa16.77■□□□□ 0.28
VPS29-207ENST00000549970 MPP6Q9NZW5 540 aa16.77■□□□□ 0.28
VPS29-207ENST00000549970 WDFY3Q8IZQ1 3526 aa16.77■□□□□ 0.27
VPS29-207ENST00000549970 CABIN1Q9Y6J0 2220 aa16.77■□□□□ 0.27
VPS29-207ENST00000549970 A0A1W2PPC4 97 aa16.76■□□□□ 0.27
VPS29-207ENST00000549970 C1QTNF9BB2RNN3 333 aa16.76■□□□□ 0.27
VPS29-207ENST00000549970 E9PAM4 449 aa16.76■□□□□ 0.27
VPS29-207ENST00000549970 PLK4O00444 970 aa16.76■□□□□ 0.27
VPS29-207ENST00000549970 KCNK3O14649 394 aa16.76■□□□□ 0.27
VPS29-207ENST00000549970 SNAP91O60641 907 aa16.76■□□□□ 0.27
VPS29-207ENST00000549970 SRGAP2O75044 1071 aa16.76■□□□□ 0.27
VPS29-207ENST00000549970 KRT37O76014 449 aa16.76■□□□□ 0.27
VPS29-207ENST00000549970 CYP1A1P04798 512 aaPredicted RBP16.76■□□□□ 0.27
VPS29-207ENST00000549970 C1QTNF9P0C862 333 aa16.76■□□□□ 0.27
VPS29-207ENST00000549970 ZNF883P0CG24 379 aa16.76■□□□□ 0.27
VPS29-207ENST00000549970 CDK11BP21127 795 aaKnown RBP16.76■□□□□ 0.27
VPS29-207ENST00000549970 DRD3P35462 400 aa16.76■□□□□ 0.27
VPS29-207ENST00000549970 STAT1P42224 750 aa16.76■□□□□ 0.27
VPS29-207ENST00000549970 VASPP50552 380 aaPredicted RBP16.76■□□□□ 0.27
VPS29-207ENST00000549970 KRT83P78385 493 aa16.76■□□□□ 0.27
VPS29-207ENST00000549970 CDO1Q16878 200 aa16.76■□□□□ 0.27
VPS29-207ENST00000549970 POM121L1PQ3SYA9 428 aa16.76■□□□□ 0.27
VPS29-207ENST00000549970 KCNT1Q5JUK3 1230 aa16.76■□□□□ 0.27
VPS29-207ENST00000549970 UNQ6494/PRO21346Q6UXR6 183 aa16.76■□□□□ 0.27
VPS29-207ENST00000549970 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.76■□□□□ 0.27
VPS29-207ENST00000549970 DSG4Q86SJ6 1040 aa16.76■□□□□ 0.27
VPS29-207ENST00000549970 SH2D3CQ8N5H7 860 aa16.76■□□□□ 0.27
VPS29-207ENST00000549970 NEK11Q8NG66 645 aa16.76■□□□□ 0.27
VPS29-207ENST00000549970 C1orf74Q96LT6 269 aa16.76■□□□□ 0.27
VPS29-207ENST00000549970 PSMB7Q99436 277 aa16.76■□□□□ 0.27
VPS29-207ENST00000549970 EBF2Q9HAK2 575 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms