RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 ANO4Q32M45 955 aa17.81■□□□□ 0.44
LETMD1-220ENST00000549686 EML3Q32P44 896 aa17.81■□□□□ 0.44
LETMD1-220ENST00000549686 PUS10Q3MIT2 529 aaKnown RBP17.81■□□□□ 0.44
LETMD1-220ENST00000549686 TANGO2Q6ICL3 276 aa17.81■□□□□ 0.44
LETMD1-220ENST00000549686 CXorf57Q6NSI4 855 aaKnown RBP17.81■□□□□ 0.44
LETMD1-220ENST00000549686 TPGS1Q6ZTW0 290 aa17.81■□□□□ 0.44
LETMD1-220ENST00000549686 CARNMT1Q8N4J0 409 aa17.81■□□□□ 0.44
LETMD1-220ENST00000549686 FIBINQ8TAL6 211 aa17.81■□□□□ 0.44
LETMD1-220ENST00000549686 NSMCE1Q8WV22 266 aa17.81■□□□□ 0.44
LETMD1-220ENST00000549686 ARHGEF2Q92974 986 aaKnown RBP17.81■□□□□ 0.44
LETMD1-220ENST00000549686 HMCESQ96FZ2 354 aa17.81■□□□□ 0.44
LETMD1-220ENST00000549686 LRRC3BQ96PB8 259 aa17.81■□□□□ 0.44
LETMD1-220ENST00000549686 LGMNQ99538 433 aa17.81■□□□□ 0.44
LETMD1-220ENST00000549686 BBS2Q9BXC9 721 aa17.81■□□□□ 0.44
LETMD1-220ENST00000549686 USP29Q9HBJ7 922 aa17.81■□□□□ 0.44
LETMD1-220ENST00000549686 KIAA1522Q9P206 1035 aaPredicted RBP17.81■□□□□ 0.44
LETMD1-220ENST00000549686 IPO11Q9UI26 975 aaKnown RBP17.81■□□□□ 0.44
LETMD1-220ENST00000549686 FAM50BQ9Y247 325 aa17.81■□□□□ 0.44
LETMD1-220ENST00000549686 NEU2Q9Y3R4 380 aa17.81■□□□□ 0.44
LETMD1-220ENST00000549686 CXorf51AA0A1B0GTR3 108 aa17.8■□□□□ 0.44
LETMD1-220ENST00000549686 GRXCR2A6NFK2 248 aa17.8■□□□□ 0.44
LETMD1-220ENST00000549686 C5orf60A6NFR6 353 aa17.8■□□□□ 0.44
LETMD1-220ENST00000549686 ZSCAN5CA6NGD5 496 aaPredicted RBP17.8■□□□□ 0.44
LETMD1-220ENST00000549686 HOXC11O43248 304 aaPredicted RBP17.8■□□□□ 0.44
LETMD1-220ENST00000549686 HEXIM1O94992 359 aaKnown RBP17.8■□□□□ 0.44
LETMD1-220ENST00000549686 KRT14P02533 472 aa17.8■□□□□ 0.44
LETMD1-220ENST00000549686 RHOXF2BP0C7M4 288 aa17.8■□□□□ 0.44
LETMD1-220ENST00000549686 DRG2P55039 364 aaKnown RBP17.8■□□□□ 0.44
LETMD1-220ENST00000549686 IL10RBQ08334 325 aa17.8■□□□□ 0.44
LETMD1-220ENST00000549686 NR1H3Q13133 447 aa17.8■□□□□ 0.44
LETMD1-220ENST00000549686 SERINC3Q13530 473 aa17.8■□□□□ 0.44
LETMD1-220ENST00000549686 DHCR24Q15392 516 aa17.8■□□□□ 0.44
LETMD1-220ENST00000549686 ERCC6LQ2NKX8 1250 aa17.8■□□□□ 0.44
LETMD1-220ENST00000549686 TMCO4Q5TGY1 634 aa17.8■□□□□ 0.44
LETMD1-220ENST00000549686 VITQ6UXI7 678 aa17.8■□□□□ 0.44
LETMD1-220ENST00000549686 TMEM25Q86YD3 366 aa17.8■□□□□ 0.44
LETMD1-220ENST00000549686 IFT20Q8IY31 132 aa17.8■□□□□ 0.44
LETMD1-220ENST00000549686 PLCD3Q8N3E9 789 aa17.8■□□□□ 0.44
LETMD1-220ENST00000549686 FAM71DQ8N9W8 422 aa17.8■□□□□ 0.44
LETMD1-220ENST00000549686 NXPE3Q969Y0 559 aa17.8■□□□□ 0.44
LETMD1-220ENST00000549686 P2RY11Q96G91 374 aa17.8■□□□□ 0.44
LETMD1-220ENST00000549686 ZNF599Q96NL3 588 aa17.8■□□□□ 0.44
LETMD1-220ENST00000549686 FAM83CQ9BQN1 747 aa17.8■□□□□ 0.44
LETMD1-220ENST00000549686 RHOXF2Q9BQY4 288 aa17.8■□□□□ 0.44
LETMD1-220ENST00000549686 LINC00597Q9H2U6 94 aa17.8■□□□□ 0.44
LETMD1-220ENST00000549686 SP110Q9HB58 689 aa17.8■□□□□ 0.44
LETMD1-220ENST00000549686 HAUS2Q9NVX0 235 aa17.8■□□□□ 0.44
LETMD1-220ENST00000549686 PAK5Q9P286 719 aa17.8■□□□□ 0.44
LETMD1-220ENST00000549686 TRHDEQ9UKU6 1024 aa17.8■□□□□ 0.44
LETMD1-220ENST00000549686 HPCAL4Q9UM19 191 aa17.8■□□□□ 0.44
LETMD1-220ENST00000549686 ANHXE9PGG2 379 aa17.79■□□□□ 0.44
LETMD1-220ENST00000549686 MATN3O15232 486 aa17.79■□□□□ 0.44
LETMD1-220ENST00000549686 CHADO15335 359 aa17.79■□□□□ 0.44
LETMD1-220ENST00000549686 MAFKO60675 156 aa17.79■□□□□ 0.44
LETMD1-220ENST00000549686 OPHN1O60890 802 aa17.79■□□□□ 0.44
LETMD1-220ENST00000549686 GCATO75600 419 aa17.79■□□□□ 0.44
LETMD1-220ENST00000549686 IFNB1P01574 187 aa17.79■□□□□ 0.44
LETMD1-220ENST00000549686 IFI35P80217 286 aaPredicted RBP17.79■□□□□ 0.44
LETMD1-220ENST00000549686 LEXMQ3ZCV2 418 aa17.79■□□□□ 0.44
LETMD1-220ENST00000549686 LY6G5CQ5SRR4 150 aa17.79■□□□□ 0.44
LETMD1-220ENST00000549686 RHBDF2Q6PJF5 856 aa17.79■□□□□ 0.44
LETMD1-220ENST00000549686 CPA6Q8N4T0 437 aa17.79■□□□□ 0.44
LETMD1-220ENST00000549686 BBOF1Q8ND07 529 aa17.79■□□□□ 0.44
LETMD1-220ENST00000549686 SEC14L1Q92503 715 aa17.79■□□□□ 0.44
LETMD1-220ENST00000549686 MAML1Q92585 1016 aa17.79■□□□□ 0.44
LETMD1-220ENST00000549686 LRRC45Q96CN5 670 aa17.79■□□□□ 0.44
LETMD1-220ENST00000549686 XPO6Q96QU8 1125 aaKnown RBP17.79■□□□□ 0.44
LETMD1-220ENST00000549686 ACE2Q9BYF1 805 aaPredicted RBP17.79■□□□□ 0.44
LETMD1-220ENST00000549686 FAM129AQ9BZQ8 928 aa17.79■□□□□ 0.44
LETMD1-220ENST00000549686 MUC3BQ9H195 1237 aa17.79■□□□□ 0.44
LETMD1-220ENST00000549686 ASIC3Q9UHC3 531 aa17.79■□□□□ 0.44
LETMD1-220ENST00000549686 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.78■□□□□ 0.44
LETMD1-220ENST00000549686 A0A0A0MRY4 1105 aa17.78■□□□□ 0.44
LETMD1-220ENST00000549686 NEDD8-MDP1E9PL57 170 aa17.78■□□□□ 0.44
LETMD1-220ENST00000549686 KDELR3O43731 214 aa17.78■□□□□ 0.44
LETMD1-220ENST00000549686 PRAMEF11O60813 436 aa17.78■□□□□ 0.44
LETMD1-220ENST00000549686 CYP17A1P05093 508 aa17.78■□□□□ 0.44
LETMD1-220ENST00000549686 ADH5P11766 374 aa17.78■□□□□ 0.44
LETMD1-220ENST00000549686 TYRP14679 529 aa17.78■□□□□ 0.44
LETMD1-220ENST00000549686 VAV1P15498 845 aa17.78■□□□□ 0.44
LETMD1-220ENST00000549686 PLK1P53350 603 aa17.78■□□□□ 0.44
LETMD1-220ENST00000549686 CUL1Q13616 776 aa17.78■□□□□ 0.44
LETMD1-220ENST00000549686 HTR4Q13639 388 aa17.78■□□□□ 0.44
LETMD1-220ENST00000549686 HNRNPDQ14103 355 aaKnown RBP17.78■□□□□ 0.44
LETMD1-220ENST00000549686 DMC1Q14565 340 aa17.78■□□□□ 0.44
LETMD1-220ENST00000549686 RFTN1Q14699 578 aaPredicted RBP17.78■□□□□ 0.44
LETMD1-220ENST00000549686 RNF219Q5W0B1 726 aaPredicted RBP17.78■□□□□ 0.44
LETMD1-220ENST00000549686 DUPD1Q68J44 220 aa17.78■□□□□ 0.44
LETMD1-220ENST00000549686 IL31Q6EBC2 164 aa17.78■□□□□ 0.44
LETMD1-220ENST00000549686 ZNF354CQ86Y25 554 aa17.78■□□□□ 0.44
LETMD1-220ENST00000549686 TP53INP2Q8IXH6 220 aa17.78■□□□□ 0.44
LETMD1-220ENST00000549686 CCDC33Q8N5R6 958 aa17.78■□□□□ 0.44
LETMD1-220ENST00000549686 EIF1ADQ8N9N8 165 aaKnown RBP17.78■□□□□ 0.44
LETMD1-220ENST00000549686 DCAF4L2Q8NA75 395 aa17.78■□□□□ 0.44
LETMD1-220ENST00000549686 SPATA13Q96N96 652 aa17.78■□□□□ 0.44
LETMD1-220ENST00000549686 PPP1R2P1Q96PQ5 205 aa17.78■□□□□ 0.44
LETMD1-220ENST00000549686 FEM1AQ9BSK4 669 aa17.78■□□□□ 0.44
LETMD1-220ENST00000549686 C2orf49Q9BVC5 232 aaPredicted RBP17.78■□□□□ 0.44
LETMD1-220ENST00000549686 TRMT61BQ9BVS5 477 aaKnown RBP17.78■□□□□ 0.44
LETMD1-220ENST00000549686 PHF7Q9BWX1 381 aaPredicted RBP17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms