RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 SLC10A2Q12908 348 aaPredicted RBP11.34□□□□□ -0.59
LINC00661-204ENST00000549354 AGMOQ6ZNB7 445 aa11.34□□□□□ -0.59
LINC00661-204ENST00000549354 SDCCAG8Q86SQ7 713 aaPredicted RBP11.34□□□□□ -0.59
LINC00661-204ENST00000549354 CAND1Q86VP6 1230 aaKnown RBP11.34□□□□□ -0.59
LINC00661-204ENST00000549354 CCNYL1Q8N7R7 359 aa11.34□□□□□ -0.59
LINC00661-204ENST00000549354 RNF34Q969K3 372 aa11.34□□□□□ -0.59
LINC00661-204ENST00000549354 GCNAQ96QF7 691 aa11.34□□□□□ -0.59
LINC00661-204ENST00000549354 PHF12Q96QT6 1004 aa11.34□□□□□ -0.59
LINC00661-204ENST00000549354 C11orf84Q9BUA3 381 aaPredicted RBP11.34□□□□□ -0.59
LINC00661-204ENST00000549354 WWP1Q9H0M0 922 aa11.34□□□□□ -0.59
LINC00661-204ENST00000549354 XAB2Q9HCS7 855 aaKnown RBP11.34□□□□□ -0.59
LINC00661-204ENST00000549354 TAGLN3Q9UI15 199 aa11.34□□□□□ -0.59
LINC00661-204ENST00000549354 A0A0C4DFX4 3053 aa11.34□□□□□ -0.59
LINC00661-204ENST00000549354 SPATA31D3P0C874 917 aa11.34□□□□□ -0.59
LINC00661-204ENST00000549354 DHRS4L1P0CG22 281 aa11.34□□□□□ -0.59
LINC00661-204ENST00000549354 RPL9P32969 192 aaKnown RBP11.34□□□□□ -0.59
LINC00661-204ENST00000549354 PLK1P53350 603 aa11.34□□□□□ -0.59
LINC00661-204ENST00000549354 AQP4P55087 323 aa11.34□□□□□ -0.59
LINC00661-204ENST00000549354 BST2Q10589 180 aaKnown RBP11.34□□□□□ -0.59
LINC00661-204ENST00000549354 DLG1Q12959 904 aa11.34□□□□□ -0.59
LINC00661-204ENST00000549354 LBRQ14739 615 aaKnown RBP11.34□□□□□ -0.59
LINC00661-204ENST00000549354 SFT2D3Q587I9 215 aa11.34□□□□□ -0.59
LINC00661-204ENST00000549354 ATG16L1Q676U5 607 aa11.34□□□□□ -0.59
LINC00661-204ENST00000549354 HEATR6Q6AI08 1181 aaKnown RBP11.34□□□□□ -0.59
LINC00661-204ENST00000549354 SPATA31D4Q6ZUB0 917 aa11.34□□□□□ -0.59
LINC00661-204ENST00000549354 DEFB107AQ8IZN7 70 aa11.34□□□□□ -0.59
LINC00661-204ENST00000549354 GALNT15Q8N3T1 639 aa11.34□□□□□ -0.59
LINC00661-204ENST00000549354 ZNF398Q8TD17 642 aa11.34□□□□□ -0.59
LINC00661-204ENST00000549354 GATA6Q92908 595 aa11.34□□□□□ -0.59
LINC00661-204ENST00000549354 DNAJC1Q96KC8 554 aaKnown RBP11.34□□□□□ -0.59
LINC00661-204ENST00000549354 SCYL1Q96KG9 808 aa11.34□□□□□ -0.59
LINC00661-204ENST00000549354 AGAP2Q99490 1192 aa11.34□□□□□ -0.59
LINC00661-204ENST00000549354 HNRNPABQ99729 332 aaKnown RBP11.34□□□□□ -0.59
LINC00661-204ENST00000549354 KLC2Q9H0B6 622 aa11.34□□□□□ -0.59
LINC00661-204ENST00000549354 SNX25Q9H3E2 840 aa11.34□□□□□ -0.59
LINC00661-204ENST00000549354 HBS1LQ9Y450 684 aaKnown RBP11.34□□□□□ -0.59
LINC00661-204ENST00000549354 ASB3Q9Y575 518 aa11.34□□□□□ -0.59
LINC00661-204ENST00000549354 TPP1O14773 563 aa11.34□□□□□ -0.59
LINC00661-204ENST00000549354 PHGDHO43175 533 aaKnown RBP11.34□□□□□ -0.59
LINC00661-204ENST00000549354 HUS1O60921 280 aa11.34□□□□□ -0.59
LINC00661-204ENST00000549354 PAX3P23760 479 aa11.34□□□□□ -0.59
LINC00661-204ENST00000549354 ACLYP53396 1101 aa11.34□□□□□ -0.59
LINC00661-204ENST00000549354 BCAT1P54687 386 aa11.34□□□□□ -0.59
LINC00661-204ENST00000549354 ITGA7Q13683 1181 aa11.34□□□□□ -0.59
LINC00661-204ENST00000549354 LPIN1Q14693 890 aa11.34□□□□□ -0.59
LINC00661-204ENST00000549354 HSP90AA5PQ58FG0 334 aa11.34□□□□□ -0.59
LINC00661-204ENST00000549354 PAOXQ6QHF9 649 aa11.34□□□□□ -0.59
LINC00661-204ENST00000549354 RNF180Q86T96 592 aa11.34□□□□□ -0.59
LINC00661-204ENST00000549354 OSTM1Q86WC4 334 aa11.34□□□□□ -0.59
LINC00661-204ENST00000549354 ADGRF2Q8IZF7 708 aa11.34□□□□□ -0.59
LINC00661-204ENST00000549354 MCUQ8NE86 351 aa11.34□□□□□ -0.59
LINC00661-204ENST00000549354 ZSCAN18Q8TBC5 510 aaPredicted RBP11.34□□□□□ -0.59
LINC00661-204ENST00000549354 TNIP3Q96KP6 325 aa11.34□□□□□ -0.59
LINC00661-204ENST00000549354 HSFY1Q96LI6 401 aa11.34□□□□□ -0.59
LINC00661-204ENST00000549354 ZFP42Q96MM3 310 aa11.34□□□□□ -0.59
LINC00661-204ENST00000549354 MED10Q9BTT4 135 aa11.34□□□□□ -0.59
LINC00661-204ENST00000549354 TSPYL2Q9H2G4 693 aaPredicted RBP11.34□□□□□ -0.59
LINC00661-204ENST00000549354 MIOSQ9NXC5 875 aa11.34□□□□□ -0.59
LINC00661-204ENST00000549354 ZNF212Q9UDV6 495 aa11.34□□□□□ -0.59
LINC00661-204ENST00000549354 PADI3Q9ULW8 664 aa11.34□□□□□ -0.59
LINC00661-204ENST00000549354 DNAH14Q0VDD8 3507 aa11.33□□□□□ -0.59
LINC00661-204ENST00000549354 BPTFQ12830 3046 aa11.33□□□□□ -0.6
LINC00661-204ENST00000549354 A0A0U1RQF3 1178 aa11.33□□□□□ -0.6
LINC00661-204ENST00000549354 HMX2A2RU54 273 aa11.33□□□□□ -0.6
LINC00661-204ENST00000549354 MOXD2PA6NHM9 499 aa11.33□□□□□ -0.6
LINC00661-204ENST00000549354 MEIS3P2A8K0S8 358 aa11.33□□□□□ -0.6
LINC00661-204ENST00000549354 E7ESA3 106 aa11.33□□□□□ -0.6
LINC00661-204ENST00000549354 TM7SF2O76062 418 aa11.33□□□□□ -0.6
LINC00661-204ENST00000549354 HDCP19113 662 aa11.33□□□□□ -0.6
LINC00661-204ENST00000549354 RANBP1P43487 201 aa11.33□□□□□ -0.6
LINC00661-204ENST00000549354 SLC18A2Q05940 514 aa11.33□□□□□ -0.6
LINC00661-204ENST00000549354 FAM47CQ5HY64 1035 aa11.33□□□□□ -0.6
LINC00661-204ENST00000549354 SH2D5Q6ZV89 423 aa11.33□□□□□ -0.6
LINC00661-204ENST00000549354 PHTF2Q8N3S3 785 aa11.33□□□□□ -0.6
LINC00661-204ENST00000549354 PQLC3Q8N755 202 aa11.33□□□□□ -0.6
LINC00661-204ENST00000549354 TUBB6Q9BUF5 446 aa11.33□□□□□ -0.6
LINC00661-204ENST00000549354 PLAC1Q9HBJ0 212 aa11.33□□□□□ -0.6
LINC00661-204ENST00000549354 IRAK4Q9NWZ3 460 aa11.33□□□□□ -0.6
LINC00661-204ENST00000549354 ETAA1Q9NY74 926 aa11.33□□□□□ -0.6
LINC00661-204ENST00000549354 RPS6KL1Q9Y6S9 549 aa11.33□□□□□ -0.6
LINC00661-204ENST00000549354 ARL5CA6NH57 179 aa11.33□□□□□ -0.6
LINC00661-204ENST00000549354 CCL22O00626 93 aa11.33□□□□□ -0.6
LINC00661-204ENST00000549354 MGEA5O60502 916 aa11.33□□□□□ -0.6
LINC00661-204ENST00000549354 KRT38O76015 456 aa11.33□□□□□ -0.6
LINC00661-204ENST00000549354 THP07101 528 aa11.33□□□□□ -0.6
LINC00661-204ENST00000549354 PSMB4P28070 264 aa11.33□□□□□ -0.6
LINC00661-204ENST00000549354 THPOP40225 353 aa11.33□□□□□ -0.6
LINC00661-204ENST00000549354 ACADSBP45954 432 aa11.33□□□□□ -0.6
LINC00661-204ENST00000549354 KCNJ11Q14654 390 aa11.33□□□□□ -0.6
LINC00661-204ENST00000549354 CCDC14Q49A88 953 aa11.33□□□□□ -0.6
LINC00661-204ENST00000549354 TMEM198Q66K66 360 aa11.33□□□□□ -0.6
LINC00661-204ENST00000549354 TRAF7Q6Q0C0 670 aa11.33□□□□□ -0.6
LINC00661-204ENST00000549354 RNF111Q6ZNA4 994 aa11.33□□□□□ -0.6
LINC00661-204ENST00000549354 ATG14Q6ZNE5 492 aa11.33□□□□□ -0.6
LINC00661-204ENST00000549354 SLC26A9Q7LBE3 791 aa11.33□□□□□ -0.6
LINC00661-204ENST00000549354 C10orf107Q8IVU9 208 aa11.33□□□□□ -0.6
LINC00661-204ENST00000549354 TMEM86AQ8N2M4 240 aa11.33□□□□□ -0.6
LINC00661-204ENST00000549354 CENPIQ92674 756 aaPredicted RBP11.33□□□□□ -0.6
LINC00661-204ENST00000549354 RSAD1Q9HA92 442 aa11.33□□□□□ -0.6
LINC00661-204ENST00000549354 POPDC2Q9HBU9 364 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms