RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 C2CD4DB7Z1M9 353 aa29.47■■■□□ 2.31
BRF1-213ENST00000548421 ZNF189O75820 626 aaPredicted RBP29.47■■■□□ 2.31
BRF1-213ENST00000548421 ECEL1O95672 775 aa29.47■■■□□ 2.31
BRF1-213ENST00000548421 TYRP14679 529 aa29.47■■■□□ 2.31
BRF1-213ENST00000548421 ZNF33AQ06730 810 aa29.47■■■□□ 2.31
BRF1-213ENST00000548421 AP1B1Q10567 949 aa29.47■■■□□ 2.31
BRF1-213ENST00000548421 TEX35Q5T0J7 233 aa29.47■■■□□ 2.31
BRF1-213ENST00000548421 B4GALNT4Q76KP1 1039 aa29.47■■■□□ 2.31
BRF1-213ENST00000548421 ZNF557Q8N988 423 aaPredicted RBP29.47■■■□□ 2.31
BRF1-213ENST00000548421 OR52K2Q8NGK3 314 aa29.47■■■□□ 2.31
BRF1-213ENST00000548421 EBF3Q9H4W6 596 aa29.47■■■□□ 2.31
BRF1-213ENST00000548421 C10orf88Q9H8K7 445 aa29.47■■■□□ 2.31
BRF1-213ENST00000548421 RAD51CO43502 376 aa29.46■■■□□ 2.31
BRF1-213ENST00000548421 GAS8O95995 478 aa29.46■■■□□ 2.31
BRF1-213ENST00000548421 ADH5P11766 374 aa29.46■■■□□ 2.31
BRF1-213ENST00000548421 ARSAP15289 507 aa29.46■■■□□ 2.31
BRF1-213ENST00000548421 ETFBP38117 255 aa29.46■■■□□ 2.31
BRF1-213ENST00000548421 GLE1Q53GS7 698 aaKnown RBP29.46■■■□□ 2.31
BRF1-213ENST00000548421 HEATR6Q6AI08 1181 aaKnown RBP29.46■■■□□ 2.31
BRF1-213ENST00000548421 CCDC70Q6NSX1 233 aa29.46■■■□□ 2.31
BRF1-213ENST00000548421 GSTA5Q7RTV2 222 aa29.46■■■□□ 2.31
BRF1-213ENST00000548421 ALLCQ8N6M5 410 aa29.46■■■□□ 2.31
BRF1-213ENST00000548421 FIBINQ8TAL6 211 aa29.46■■■□□ 2.31
BRF1-213ENST00000548421 WFDC5Q8TCV5 224 aa29.46■■■□□ 2.31
BRF1-213ENST00000548421 LRRN4Q8WUT4 740 aa29.46■■■□□ 2.31
BRF1-213ENST00000548421 RSAD2Q8WXG1 361 aa29.46■■■□□ 2.31
BRF1-213ENST00000548421 ARHGEF2Q92974 986 aaKnown RBP29.46■■■□□ 2.31
BRF1-213ENST00000548421 TSGA13Q96PP4 275 aa29.46■■■□□ 2.31
BRF1-213ENST00000548421 FERMT1Q9BQL6 677 aa29.46■■■□□ 2.31
BRF1-213ENST00000548421 UNC80Q8N2C7 3258 aa29.45■■■□□ 2.31
BRF1-213ENST00000548421 SGK1O00141 431 aa29.45■■■□□ 2.31
BRF1-213ENST00000548421 CHADO15335 359 aa29.45■■■□□ 2.31
BRF1-213ENST00000548421 RBL1P28749 1068 aa29.45■■■□□ 2.31
BRF1-213ENST00000548421 STIP1P31948 543 aaKnown RBP29.45■■■□□ 2.31
BRF1-213ENST00000548421 PTGIRP43119 386 aa29.45■■■□□ 2.31
BRF1-213ENST00000548421 OXCT1P55809 520 aa29.45■■■□□ 2.31
BRF1-213ENST00000548421 GAD2Q05329 585 aa29.45■■■□□ 2.31
BRF1-213ENST00000548421 PUS10Q3MIT2 529 aaKnown RBP29.45■■■□□ 2.31
BRF1-213ENST00000548421 FSCBQ5H9T9 825 aa29.45■■■□□ 2.31
BRF1-213ENST00000548421 PTCRAQ6ISU1 281 aaPredicted RBP29.45■■■□□ 2.31
BRF1-213ENST00000548421 ZNF354CQ86Y25 554 aa29.45■■■□□ 2.31
BRF1-213ENST00000548421 PLCD3Q8N3E9 789 aa29.45■■■□□ 2.31
BRF1-213ENST00000548421 MAFAQ8NHW3 353 aaPredicted RBP29.45■■■□□ 2.31
BRF1-213ENST00000548421 LRRC1Q9BTT6 524 aa29.45■■■□□ 2.31
BRF1-213ENST00000548421 RPP25Q9BUL9 199 aaKnown RBP29.45■■■□□ 2.31
BRF1-213ENST00000548421 TRMT61BQ9BVS5 477 aaKnown RBP29.45■■■□□ 2.31
BRF1-213ENST00000548421 MUC3BQ9H195 1237 aa29.45■■■□□ 2.31
BRF1-213ENST00000548421 FAM50BQ9Y247 325 aa29.45■■■□□ 2.31
BRF1-213ENST00000548421 A0A0D9SEW6 157 aa29.44■■■□□ 2.3
BRF1-213ENST00000548421 KCNN4O15554 427 aa29.44■■■□□ 2.3
BRF1-213ENST00000548421 TTI1O43156 1089 aa29.44■■■□□ 2.3
BRF1-213ENST00000548421 HOXC11O43248 304 aaPredicted RBP29.44■■■□□ 2.3
BRF1-213ENST00000548421 VAV1P15498 845 aa29.44■■■□□ 2.3
BRF1-213ENST00000548421 SERINC3Q13530 473 aa29.44■■■□□ 2.3
BRF1-213ENST00000548421 RNF219Q5W0B1 726 aaPredicted RBP29.44■■■□□ 2.3
BRF1-213ENST00000548421 ARHGAP36Q6ZRI8 547 aa29.44■■■□□ 2.3
BRF1-213ENST00000548421 CCDC13Q8IYE1 715 aa29.44■■■□□ 2.3
BRF1-213ENST00000548421 HTR3CQ8WXA8 447 aa29.44■■■□□ 2.3
BRF1-213ENST00000548421 USP29Q9HBJ7 922 aa29.44■■■□□ 2.3
BRF1-213ENST00000548421 HPS4Q9NQG7 708 aa29.44■■■□□ 2.3
BRF1-213ENST00000548421 IPO11Q9UI26 975 aaKnown RBP29.44■■■□□ 2.3
BRF1-213ENST00000548421 CLEC4EQ9ULY5 219 aa29.44■■■□□ 2.3
BRF1-213ENST00000548421 MAFKO60675 156 aa29.43■■■□□ 2.3
BRF1-213ENST00000548421 CCNCP24863 283 aa29.43■■■□□ 2.3
BRF1-213ENST00000548421 GDI1P31150 447 aa29.43■■■□□ 2.3
BRF1-213ENST00000548421 ACVRL1P37023 503 aa29.43■■■□□ 2.3
BRF1-213ENST00000548421 MRPS25P82663 173 aaKnown RBP29.43■■■□□ 2.3
BRF1-213ENST00000548421 TIGD7Q6NT04 549 aaPredicted RBP29.43■■■□□ 2.3
BRF1-213ENST00000548421 SYDE1Q6ZW31 735 aaPredicted RBP29.43■■■□□ 2.3
BRF1-213ENST00000548421 JAMLQ86YT9 394 aa29.43■■■□□ 2.3
BRF1-213ENST00000548421 CPA6Q8N4T0 437 aa29.43■■■□□ 2.3
BRF1-213ENST00000548421 FAM71DQ8N9W8 422 aa29.43■■■□□ 2.3
BRF1-213ENST00000548421 OR7D4Q8NG98 312 aa29.43■■■□□ 2.3
BRF1-213ENST00000548421 ECT2Q9H8V3 914 aa29.43■■■□□ 2.3
BRF1-213ENST00000548421 KIAA1522Q9P206 1035 aaPredicted RBP29.43■■■□□ 2.3
BRF1-213ENST00000548421 COL4A3Q01955 1670 aa29.42■■■□□ 2.3
BRF1-213ENST00000548421 FAM187AA6NFU0 413 aa29.42■■■□□ 2.3
BRF1-213ENST00000548421 GDF10P55107 478 aa29.42■■■□□ 2.3
BRF1-213ENST00000548421 TNK2Q07912 1038 aa29.42■■■□□ 2.3
BRF1-213ENST00000548421 PPP1R7Q15435 360 aa29.42■■■□□ 2.3
BRF1-213ENST00000548421 IL31Q6EBC2 164 aa29.42■■■□□ 2.3
BRF1-213ENST00000548421 CCDC89Q8N998 374 aa29.42■■■□□ 2.3
BRF1-213ENST00000548421 UBXN4Q92575 508 aa29.42■■■□□ 2.3
BRF1-213ENST00000548421 SLC2A11Q9BYW1 496 aa29.42■■■□□ 2.3
BRF1-213ENST00000548421 MTSS1O43312 755 aa29.42■■■□□ 2.3
BRF1-213ENST00000548421 CACNG3O60359 315 aa29.42■■■□□ 2.3
BRF1-213ENST00000548421 CSKP41240 450 aa29.42■■■□□ 2.3
BRF1-213ENST00000548421 LMAN2Q12907 356 aa29.42■■■□□ 2.3
BRF1-213ENST00000548421 NR1H3Q13133 447 aa29.42■■■□□ 2.3
BRF1-213ENST00000548421 RUNX3Q13761 415 aa29.42■■■□□ 2.3
BRF1-213ENST00000548421 RTP4Q96DX8 246 aa29.42■■■□□ 2.3
BRF1-213ENST00000548421 XPO6Q96QU8 1125 aaKnown RBP29.42■■■□□ 2.3
BRF1-213ENST00000548421 FEM1AQ9BSK4 669 aa29.42■■■□□ 2.3
BRF1-213ENST00000548421 ACE2Q9BYF1 805 aaPredicted RBP29.42■■■□□ 2.3
BRF1-213ENST00000548421 SP110Q9HB58 689 aa29.42■■■□□ 2.3
BRF1-213ENST00000548421 ATP13A1Q9HD20 1204 aa29.42■■■□□ 2.3
BRF1-213ENST00000548421 IFNB1P01574 187 aa29.41■■■□□ 2.3
BRF1-213ENST00000548421 MZF1P28698 734 aaPredicted RBP29.41■■■□□ 2.3
BRF1-213ENST00000548421 SLC12A1Q13621 1099 aa29.41■■■□□ 2.3
BRF1-213ENST00000548421 NXPE3Q969Y0 559 aa29.41■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms