RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 CDK7P50613 346 aa4.6□□□□□ -1.67
SCAF11-210ENST00000547654 LILRA4P59901 499 aa4.6□□□□□ -1.67
SCAF11-210ENST00000547654 RPS3AP61247 264 aaKnown RBP4.6□□□□□ -1.67
SCAF11-210ENST00000547654 TBL3Q12788 808 aaKnown RBP4.6□□□□□ -1.67
SCAF11-210ENST00000547654 PRPF4BQ13523 1007 aaKnown RBP4.6□□□□□ -1.67
SCAF11-210ENST00000547654 CAMK1Q14012 370 aa4.6□□□□□ -1.67
SCAF11-210ENST00000547654 DCTN1Q14203 1278 aa4.6□□□□□ -1.67
SCAF11-210ENST00000547654 TBCCQ15814 346 aa4.6□□□□□ -1.67
SCAF11-210ENST00000547654 TMEM266Q2M3C6 531 aa4.6□□□□□ -1.67
SCAF11-210ENST00000547654 TBRG1Q3YBR2 411 aa4.6□□□□□ -1.67
SCAF11-210ENST00000547654 SUPT20HL1Q3ZLR7 823 aa4.6□□□□□ -1.67
SCAF11-210ENST00000547654 ZNF484Q5JVG2 852 aa4.6□□□□□ -1.67
SCAF11-210ENST00000547654 GPR139Q6DWJ6 353 aa4.6□□□□□ -1.67
SCAF11-210ENST00000547654 SLC22A25Q6T423 547 aa4.6□□□□□ -1.67
SCAF11-210ENST00000547654 ZNF517Q6ZMY9 492 aaPredicted RBP4.6□□□□□ -1.67
SCAF11-210ENST00000547654 SLC29A4Q7RTT9 530 aa4.6□□□□□ -1.67
SCAF11-210ENST00000547654 SZRD1Q7Z422 152 aa4.6□□□□□ -1.67
SCAF11-210ENST00000547654 KDELC2Q7Z4H8 507 aa4.6□□□□□ -1.67
SCAF11-210ENST00000547654 TRABD2AQ86V40 505 aa4.6□□□□□ -1.67
SCAF11-210ENST00000547654 CNPY4Q8N129 248 aa4.6□□□□□ -1.67
SCAF11-210ENST00000547654 TTC39CQ8N584 583 aa4.6□□□□□ -1.67
SCAF11-210ENST00000547654 FAM71DQ8N9W8 422 aa4.6□□□□□ -1.67
SCAF11-210ENST00000547654 MBD3L2Q8NHZ7 208 aaPredicted RBP4.6□□□□□ -1.67
SCAF11-210ENST00000547654 METTL6Q8TCB7 284 aa4.6□□□□□ -1.67
SCAF11-210ENST00000547654 ATG4AQ8WYN0 398 aa4.6□□□□□ -1.67
SCAF11-210ENST00000547654 JAKMIP2Q96AA8 810 aa4.6□□□□□ -1.67
SCAF11-210ENST00000547654 KIF1BPQ96EK5 621 aa4.6□□□□□ -1.67
SCAF11-210ENST00000547654 NAP1L5Q96NT1 182 aaPredicted RBP4.6□□□□□ -1.67
SCAF11-210ENST00000547654 EIF3CQ99613 913 aaKnown RBP4.6□□□□□ -1.67
SCAF11-210ENST00000547654 SH2D3AQ9BRG2 576 aa4.6□□□□□ -1.67
SCAF11-210ENST00000547654 ADPGKQ9BRR6 497 aa4.6□□□□□ -1.67
SCAF11-210ENST00000547654 ITPAQ9BY32 194 aa4.6□□□□□ -1.67
SCAF11-210ENST00000547654 SIL1Q9H173 461 aa4.6□□□□□ -1.67
SCAF11-210ENST00000547654 CCDC134Q9H6E4 229 aa4.6□□□□□ -1.67
SCAF11-210ENST00000547654 RETREG1Q9H6L5 497 aa4.6□□□□□ -1.67
SCAF11-210ENST00000547654 FSCN3Q9NQT6 498 aa4.6□□□□□ -1.67
SCAF11-210ENST00000547654 ELOVL5Q9NYP7 299 aa4.6□□□□□ -1.67
SCAF11-210ENST00000547654 NDRG4Q9ULP0 352 aaKnown RBP4.6□□□□□ -1.67
SCAF11-210ENST00000547654 SH2B3Q9UQQ2 575 aa4.6□□□□□ -1.67
SCAF11-210ENST00000547654 LYVE1Q9Y5Y7 322 aa4.6□□□□□ -1.67
SCAF11-210ENST00000547654 SYNJ2O15056 1496 aa4.6□□□□□ -1.67
SCAF11-210ENST00000547654 H0YIZ8 118 aa4.59□□□□□ -1.67
SCAF11-210ENST00000547654 SMIM22K7EJ46 135 aa4.59□□□□□ -1.67
SCAF11-210ENST00000547654 VILLO15195 856 aa4.59□□□□□ -1.67
SCAF11-210ENST00000547654 CD3EAPO15446 510 aaKnown RBP4.59□□□□□ -1.67
SCAF11-210ENST00000547654 TBCAO75347 108 aaKnown RBP4.59□□□□□ -1.67
SCAF11-210ENST00000547654 JTBO76095 146 aa4.59□□□□□ -1.67
SCAF11-210ENST00000547654 ADGRL1O94910 1474 aa4.59□□□□□ -1.67
SCAF11-210ENST00000547654 NXPH3O95157 252 aa4.59□□□□□ -1.67
SCAF11-210ENST00000547654 NTN1O95631 604 aa4.59□□□□□ -1.67
SCAF11-210ENST00000547654 CER1O95813 267 aa4.59□□□□□ -1.67
SCAF11-210ENST00000547654 PRKCHP24723 683 aa4.59□□□□□ -1.67
SCAF11-210ENST00000547654 RBL1P28749 1068 aa4.59□□□□□ -1.67
SCAF11-210ENST00000547654 TKTP29401 623 aaKnown RBP4.59□□□□□ -1.67
SCAF11-210ENST00000547654 PRKAR1BP31321 381 aa4.59□□□□□ -1.67
SCAF11-210ENST00000547654 ARL1P40616 181 aaPredicted RBP4.59□□□□□ -1.67
SCAF11-210ENST00000547654 GPD2P43304 727 aa4.59□□□□□ -1.67
SCAF11-210ENST00000547654 MTHFSP49914 203 aa4.59□□□□□ -1.67
SCAF11-210ENST00000547654 PGDP52209 483 aa4.59□□□□□ -1.67
SCAF11-210ENST00000547654 EPS8Q12929 822 aa4.59□□□□□ -1.67
SCAF11-210ENST00000547654 DCTN2Q13561 401 aaKnown RBP4.59□□□□□ -1.67
SCAF11-210ENST00000547654 TDGQ13569 410 aa4.59□□□□□ -1.67
SCAF11-210ENST00000547654 BMPR2Q13873 1038 aa4.59□□□□□ -1.67
SCAF11-210ENST00000547654 PROSER3Q2NL68 480 aa4.59□□□□□ -1.67
SCAF11-210ENST00000547654 AWAT2Q6E213 333 aa4.59□□□□□ -1.67
SCAF11-210ENST00000547654 NAA16Q6N069 864 aaPredicted RBP4.59□□□□□ -1.67
SCAF11-210ENST00000547654 SLC2A7Q6PXP3 512 aa4.59□□□□□ -1.67
SCAF11-210ENST00000547654 IKBIPQ70UQ0 350 aa4.59□□□□□ -1.67
SCAF11-210ENST00000547654 ZNF551Q7Z340 670 aaPredicted RBP4.59□□□□□ -1.67
SCAF11-210ENST00000547654 CLASP1Q7Z460 1538 aa4.59□□□□□ -1.67
SCAF11-210ENST00000547654 PRPF39Q86UA1 669 aaKnown RBP4.59□□□□□ -1.67
SCAF11-210ENST00000547654 GALNT13Q8IUC8 556 aa4.59□□□□□ -1.67
SCAF11-210ENST00000547654 C17orf53Q8N3J3 647 aaPredicted RBP4.59□□□□□ -1.67
SCAF11-210ENST00000547654 FSTL5Q8N475 847 aaPredicted RBP4.59□□□□□ -1.67
SCAF11-210ENST00000547654 GALNT4Q8N4A0 578 aa4.59□□□□□ -1.67
SCAF11-210ENST00000547654 DNAJB14Q8TBM8 379 aa4.59□□□□□ -1.67
SCAF11-210ENST00000547654 AFAP1L1Q8TED9 768 aa4.59□□□□□ -1.67
SCAF11-210ENST00000547654 USP6NLQ92738 828 aa4.59□□□□□ -1.67
SCAF11-210ENST00000547654 PPP2R3CQ969Q6 453 aa4.59□□□□□ -1.67
SCAF11-210ENST00000547654 HIST1H2AAQ96QV6 131 aa4.59□□□□□ -1.67
SCAF11-210ENST00000547654 QTRT1Q9BXR0 403 aaKnown RBP4.59□□□□□ -1.67
SCAF11-210ENST00000547654 MAK16Q9BXY0 300 aaKnown RBP4.59□□□□□ -1.67
SCAF11-210ENST00000547654 FTOQ9C0B1 505 aaKnown RBP eCLIP4.59□□□□□ -1.67
SCAF11-210ENST00000547654 CXorf36Q9H7Y0 433 aa4.59□□□□□ -1.67
SCAF11-210ENST00000547654 BRF2Q9HAW0 419 aa4.59□□□□□ -1.67
SCAF11-210ENST00000547654 ERVK-5Q9HDB9 667 aa4.59□□□□□ -1.67
SCAF11-210ENST00000547654 ARGLU1Q9NWB6 273 aaPredicted RBP4.59□□□□□ -1.67
SCAF11-210ENST00000547654 PIAS3Q9Y6X2 628 aa4.59□□□□□ -1.67
SCAF11-210ENST00000547654 EIF4G3O43432 1585 aaKnown RBP4.58□□□□□ -1.68
SCAF11-210ENST00000547654 FAM90A20PA6NIJ5 464 aa4.58□□□□□ -1.68
SCAF11-210ENST00000547654 SMTNL1A8MU46 457 aa4.58□□□□□ -1.68
SCAF11-210ENST00000547654 TMEM232C9JQI7 657 aa4.58□□□□□ -1.68
SCAF11-210ENST00000547654 UBL4AP11441 157 aa4.58□□□□□ -1.68
SCAF11-210ENST00000547654 TNNT1P13805 278 aa4.58□□□□□ -1.68
SCAF11-210ENST00000547654 HGFP14210 728 aa4.58□□□□□ -1.68
SCAF11-210ENST00000547654 IL11P20809 199 aa4.58□□□□□ -1.68
SCAF11-210ENST00000547654 KCNA3P22001 575 aa4.58□□□□□ -1.68
SCAF11-210ENST00000547654 NFKBIAP25963 317 aa4.58□□□□□ -1.68
SCAF11-210ENST00000547654 EPHA8P29322 1005 aaPredicted RBP4.58□□□□□ -1.68
SCAF11-210ENST00000547654 MAPK4P31152 587 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms