RNA–Protein interactions for RNA: ENST00000547533.1

AC055716.3-201, humanhuman

TSL 3 BASIC

Gene AC055716.3, Length 761 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055716.3-201ENST00000547533 CCDC173Q0VFZ6 552 aa9.4□□□□□ -0.9
AC055716.3-201ENST00000547533 BNIP3Q12983 259 aa9.4□□□□□ -0.9
AC055716.3-201ENST00000547533 ZNF177Q13360 481 aaPredicted RBP9.4□□□□□ -0.9
AC055716.3-201ENST00000547533 ZNF211Q13398 564 aaPredicted RBP9.4□□□□□ -0.9
AC055716.3-201ENST00000547533 TBC1D25Q3MII6 688 aa9.4□□□□□ -0.9
AC055716.3-201ENST00000547533 PKDCCQ504Y2 493 aa9.4□□□□□ -0.9
AC055716.3-201ENST00000547533 RAP1GAP2Q684P5 730 aa9.4□□□□□ -0.9
AC055716.3-201ENST00000547533 NADSYN1Q6IA69 706 aa9.4□□□□□ -0.9
AC055716.3-201ENST00000547533 KDM7AQ6ZMT4 941 aa9.4□□□□□ -0.9
AC055716.3-201ENST00000547533 AADATQ8N5Z0 425 aa9.4□□□□□ -0.9
AC055716.3-201ENST00000547533 FAM174AQ8TBP5 190 aa9.4□□□□□ -0.9
AC055716.3-201ENST00000547533 RFFLQ8WZ73 363 aa9.4□□□□□ -0.9
AC055716.3-201ENST00000547533 TSC1Q92574 1164 aa9.4□□□□□ -0.9
AC055716.3-201ENST00000547533 ERCC4Q92889 916 aaPredicted RBP9.4□□□□□ -0.9
AC055716.3-201ENST00000547533 PTPRN2Q92932 1015 aa9.4□□□□□ -0.9
AC055716.3-201ENST00000547533 SMARCE1Q969G3 411 aa9.4□□□□□ -0.9
AC055716.3-201ENST00000547533 CRELD1Q96HD1 420 aa9.4□□□□□ -0.9
AC055716.3-201ENST00000547533 FAM81BQ96LP2 452 aa9.4□□□□□ -0.9
AC055716.3-201ENST00000547533 CEP63Q96MT8 703 aa9.4□□□□□ -0.9
AC055716.3-201ENST00000547533 ZNF578Q96N58 590 aaPredicted RBP9.4□□□□□ -0.9
AC055716.3-201ENST00000547533 FAM129BQ96TA1 746 aa9.4□□□□□ -0.9
AC055716.3-201ENST00000547533 DUSP23Q9BVJ7 150 aa9.4□□□□□ -0.9
AC055716.3-201ENST00000547533 FAM204AQ9H8W3 233 aa9.4□□□□□ -0.9
AC055716.3-201ENST00000547533 USP29Q9HBJ7 922 aa9.4□□□□□ -0.9
AC055716.3-201ENST00000547533 POPDC2Q9HBU9 364 aa9.4□□□□□ -0.9
AC055716.3-201ENST00000547533 NCKIPSDQ9NZQ3 722 aa9.4□□□□□ -0.9
AC055716.3-201ENST00000547533 SLCO3A1Q9UIG8 710 aa9.4□□□□□ -0.9
AC055716.3-201ENST00000547533 INTS6Q9UL03 887 aaKnown RBP9.4□□□□□ -0.9
AC055716.3-201ENST00000547533 FLNBO75369 2602 aaKnown RBP9.4□□□□□ -0.9
AC055716.3-201ENST00000547533 LOC400499M0QZD8 3231 aa9.4□□□□□ -0.91
AC055716.3-201ENST00000547533 BPTFQ12830 3046 aa9.39□□□□□ -0.91
AC055716.3-201ENST00000547533 PTPRQQ9UMZ3 2332 aa9.39□□□□□ -0.91
AC055716.3-201ENST00000547533 ARID1BQ8NFD5 2236 aaPredicted RBP9.39□□□□□ -0.91
AC055716.3-201ENST00000547533 KCNU1A8MYU2 1149 aa9.39□□□□□ -0.91
AC055716.3-201ENST00000547533 H3BM21 787 aa9.39□□□□□ -0.91
AC055716.3-201ENST00000547533 PMM2O15305 246 aa9.39□□□□□ -0.91
AC055716.3-201ENST00000547533 TLX3O43711 291 aaPredicted RBP9.39□□□□□ -0.91
AC055716.3-201ENST00000547533 MT-CO3P00414 261 aa9.39□□□□□ -0.91
AC055716.3-201ENST00000547533 KRT5P13647 590 aa9.39□□□□□ -0.91
AC055716.3-201ENST00000547533 PRCPP42785 496 aa9.39□□□□□ -0.91
AC055716.3-201ENST00000547533 CTSOP43234 321 aaPredicted RBP9.39□□□□□ -0.91
AC055716.3-201ENST00000547533 RECQLP46063 649 aaPredicted RBP9.39□□□□□ -0.91
AC055716.3-201ENST00000547533 VASPP50552 380 aaPredicted RBP9.39□□□□□ -0.91
AC055716.3-201ENST00000547533 YWHAZP63104 245 aaKnown RBP9.39□□□□□ -0.91
AC055716.3-201ENST00000547533 CDK17Q00537 523 aa9.39□□□□□ -0.91
AC055716.3-201ENST00000547533 GCNT1Q02742 428 aa9.39□□□□□ -0.91
AC055716.3-201ENST00000547533 CFHR1Q03591 330 aa9.39□□□□□ -0.91
AC055716.3-201ENST00000547533 KCNJ12Q14500 433 aa9.39□□□□□ -0.91
AC055716.3-201ENST00000547533 SHBQ15464 509 aa9.39□□□□□ -0.91
AC055716.3-201ENST00000547533 MEA1Q16626 185 aa9.39□□□□□ -0.91
AC055716.3-201ENST00000547533 COBLL1Q53SF7 1204 aa9.39□□□□□ -0.91
AC055716.3-201ENST00000547533 FSCBQ5H9T9 825 aa9.39□□□□□ -0.91
AC055716.3-201ENST00000547533 SFMBT2Q5VUG0 894 aa9.39□□□□□ -0.91
AC055716.3-201ENST00000547533 ANKRD40Q6AI12 368 aa9.39□□□□□ -0.91
AC055716.3-201ENST00000547533 NEK5Q6P3R8 708 aa9.39□□□□□ -0.91
AC055716.3-201ENST00000547533 MMS22LQ6ZRQ5 1243 aa9.39□□□□□ -0.91
AC055716.3-201ENST00000547533 TAC4Q86UU9 113 aa9.39□□□□□ -0.91
AC055716.3-201ENST00000547533 SMYD4Q8IYR2 804 aaPredicted RBP9.39□□□□□ -0.91
AC055716.3-201ENST00000547533 CCAR2Q8N163 923 aaKnown RBP9.39□□□□□ -0.91
AC055716.3-201ENST00000547533 DCBLD1Q8N8Z6 715 aa9.39□□□□□ -0.91
AC055716.3-201ENST00000547533 CLEC4CQ8WTT0 213 aa9.39□□□□□ -0.91
AC055716.3-201ENST00000547533 STK32AQ8WU08 396 aa9.39□□□□□ -0.91
AC055716.3-201ENST00000547533 TFAP2BQ92481 460 aa9.39□□□□□ -0.91
AC055716.3-201ENST00000547533 SLC35C1Q96A29 364 aa9.39□□□□□ -0.91
AC055716.3-201ENST00000547533 COL26A1Q96A83 441 aa9.39□□□□□ -0.91
AC055716.3-201ENST00000547533 CCDC97Q96F63 343 aaPredicted RBP9.39□□□□□ -0.91
AC055716.3-201ENST00000547533 SLC39A13Q96H72 371 aa9.39□□□□□ -0.91
AC055716.3-201ENST00000547533 PPP1R16AQ96I34 528 aa9.39□□□□□ -0.91
AC055716.3-201ENST00000547533 LMLNQ96KR4 655 aa9.39□□□□□ -0.91
AC055716.3-201ENST00000547533 RPRD1AQ96P16 312 aaPredicted RBP9.39□□□□□ -0.91
AC055716.3-201ENST00000547533 NOX5Q96PH1 765 aa9.39□□□□□ -0.91
AC055716.3-201ENST00000547533 MUC3BQ9H195 1237 aa9.39□□□□□ -0.91
AC055716.3-201ENST00000547533 EBF2Q9HAK2 575 aa9.39□□□□□ -0.91
AC055716.3-201ENST00000547533 THSD1Q9NS62 852 aa9.39□□□□□ -0.91
AC055716.3-201ENST00000547533 TMEM51Q9NW97 253 aa9.39□□□□□ -0.91
AC055716.3-201ENST00000547533 VPS28Q9UK41 221 aa9.39□□□□□ -0.91
AC055716.3-201ENST00000547533 NAALADL1Q9UQQ1 740 aa9.39□□□□□ -0.91
AC055716.3-201ENST00000547533 DOCK9Q9BZ29 2069 aa9.39□□□□□ -0.91
AC055716.3-201ENST00000547533 CELSR3Q9NYQ7 3312 aa9.38□□□□□ -0.91
AC055716.3-201ENST00000547533 BICDL2A1A5D9 508 aa9.38□□□□□ -0.91
AC055716.3-201ENST00000547533 MCF2LO15068 1137 aa9.38□□□□□ -0.91
AC055716.3-201ENST00000547533 SIGLEC6O43699 453 aa9.38□□□□□ -0.91
AC055716.3-201ENST00000547533 BNIP3LO60238 219 aa9.38□□□□□ -0.91
AC055716.3-201ENST00000547533 SDC3O75056 442 aa9.38□□□□□ -0.91
AC055716.3-201ENST00000547533 RTN2O75298 545 aa9.38□□□□□ -0.91
AC055716.3-201ENST00000547533 GNA14O95837 355 aa9.38□□□□□ -0.91
AC055716.3-201ENST00000547533 TRUB2O95900 331 aaKnown RBP9.38□□□□□ -0.91
AC055716.3-201ENST00000547533 PRNPP04156 253 aa9.38□□□□□ -0.91
AC055716.3-201ENST00000547533 PRB1P04280 392 aa9.38□□□□□ -0.91
AC055716.3-201ENST00000547533 GP1BAP07359 652 aa9.38□□□□□ -0.91
AC055716.3-201ENST00000547533 THEGLP0DJG4 465 aa9.38□□□□□ -0.91
AC055716.3-201ENST00000547533 RBMS1P29558 406 aaKnown RBP9.38□□□□□ -0.91
AC055716.3-201ENST00000547533 STK19P49842 368 aaPredicted RBP9.38□□□□□ -0.91
AC055716.3-201ENST00000547533 PLK1P53350 603 aa9.38□□□□□ -0.91
AC055716.3-201ENST00000547533 PPP2CBP62714 309 aa9.38□□□□□ -0.91
AC055716.3-201ENST00000547533 PPP2CAP67775 309 aa9.38□□□□□ -0.91
AC055716.3-201ENST00000547533 INSM1Q01101 510 aaPredicted RBP9.38□□□□□ -0.91
AC055716.3-201ENST00000547533 TLE3Q04726 772 aa9.38□□□□□ -0.91
AC055716.3-201ENST00000547533 PNOCQ13519 176 aa9.38□□□□□ -0.91
AC055716.3-201ENST00000547533 ZC3H12AQ5D1E8 599 aaKnown RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms