RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 NTAN1Q96AB6 310 aa12.45□□□□□ -0.42
HDAC7-226ENST00000547259 PEBP4Q96S96 227 aa12.45□□□□□ -0.42
HDAC7-226ENST00000547259 SNRNP25Q9BV90 132 aaKnown RBP12.45□□□□□ -0.42
HDAC7-226ENST00000547259 ARHGEF38Q9NXL2 777 aa12.45□□□□□ -0.42
HDAC7-226ENST00000547259 DEC1Q9P2X7 70 aa12.45□□□□□ -0.42
HDAC7-226ENST00000547259 INVSQ9Y283 1065 aa12.45□□□□□ -0.42
HDAC7-226ENST00000547259 ANKRD11Q6UB99 2663 aaPredicted RBP12.45□□□□□ -0.42
HDAC7-226ENST00000547259 KCNU1A8MYU2 1149 aa12.44□□□□□ -0.42
HDAC7-226ENST00000547259 UPK3BL1B0FP48 263 aa12.44□□□□□ -0.42
HDAC7-226ENST00000547259 UPK3BL2E5RIL1 263 aa12.44□□□□□ -0.42
HDAC7-226ENST00000547259 H0Y626 953 aa12.44□□□□□ -0.42
HDAC7-226ENST00000547259 CDX4O14627 284 aaPredicted RBP12.44□□□□□ -0.42
HDAC7-226ENST00000547259 PSTPIP1O43586 416 aa12.44□□□□□ -0.42
HDAC7-226ENST00000547259 ZNF217O75362 1048 aa12.44□□□□□ -0.42
HDAC7-226ENST00000547259 TRIM16O95361 564 aa12.44□□□□□ -0.42
HDAC7-226ENST00000547259 KRT7P08729 469 aa12.44□□□□□ -0.42
HDAC7-226ENST00000547259 IL1R2P27930 398 aa12.44□□□□□ -0.42
HDAC7-226ENST00000547259 TIE1P35590 1138 aa12.44□□□□□ -0.42
HDAC7-226ENST00000547259 SLC11A2P49281 568 aa12.44□□□□□ -0.42
HDAC7-226ENST00000547259 GNG11P61952 73 aa12.44□□□□□ -0.42
HDAC7-226ENST00000547259 FOXC1Q12948 553 aa12.44□□□□□ -0.42
HDAC7-226ENST00000547259 MTA1Q13330 715 aa12.44□□□□□ -0.42
HDAC7-226ENST00000547259 E2F5Q15329 346 aa12.44□□□□□ -0.42
HDAC7-226ENST00000547259 DUOXA1Q1HG43 343 aa12.44□□□□□ -0.42
HDAC7-226ENST00000547259 GAB4Q2WGN9 574 aa12.44□□□□□ -0.42
HDAC7-226ENST00000547259 UAP1L1Q3KQV9 507 aa12.44□□□□□ -0.42
HDAC7-226ENST00000547259 ODF2Q5BJF6 829 aa12.44□□□□□ -0.42
HDAC7-226ENST00000547259 LYSMD4Q5XG99 296 aa12.44□□□□□ -0.42
HDAC7-226ENST00000547259 SLC23A3Q6PIS1 610 aa12.44□□□□□ -0.42
HDAC7-226ENST00000547259 TMEM92Q6UXU6 159 aa12.44□□□□□ -0.42
HDAC7-226ENST00000547259 NT5DC3Q86UY8 548 aa12.44□□□□□ -0.42
HDAC7-226ENST00000547259 SLC35F6Q8N357 371 aa12.44□□□□□ -0.42
HDAC7-226ENST00000547259 HDDC3Q8N4P3 179 aa12.44□□□□□ -0.42
HDAC7-226ENST00000547259 HSPH1Q92598 858 aa12.44□□□□□ -0.42
HDAC7-226ENST00000547259 BTN2A3PQ96KV6 586 aa12.44□□□□□ -0.42
HDAC7-226ENST00000547259 ANLNQ9NQW6 1124 aa12.44□□□□□ -0.42
HDAC7-226ENST00000547259 TMPRSS4Q9NRS4 437 aa12.44□□□□□ -0.42
HDAC7-226ENST00000547259 GPATCH2LQ9NWQ4 482 aa12.44□□□□□ -0.42
HDAC7-226ENST00000547259 FZD10Q9ULW2 581 aa12.44□□□□□ -0.42
HDAC7-226ENST00000547259 PACSIN2Q9UNF0 486 aaPredicted RBP12.44□□□□□ -0.42
HDAC7-226ENST00000547259 AP4E1Q9UPM8 1137 aa12.44□□□□□ -0.42
HDAC7-226ENST00000547259 ZNF510Q9Y2H8 683 aa12.44□□□□□ -0.42
HDAC7-226ENST00000547259 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.44□□□□□ -0.42
HDAC7-226ENST00000547259 ZFYVE26Q68DK2 2539 aa12.44□□□□□ -0.42
HDAC7-226ENST00000547259 CCDC66A2RUB6 948 aa12.43□□□□□ -0.42
HDAC7-226ENST00000547259 MIF4GDA9UHW6 222 aaKnown RBP12.43□□□□□ -0.42
HDAC7-226ENST00000547259 SGK1O00141 431 aa12.43□□□□□ -0.42
HDAC7-226ENST00000547259 HOXC11O43248 304 aaPredicted RBP12.43□□□□□ -0.42
HDAC7-226ENST00000547259 ACSL4O60488 711 aa12.43□□□□□ -0.42
HDAC7-226ENST00000547259 PAGE1O75459 146 aa12.43□□□□□ -0.42
HDAC7-226ENST00000547259 LATS1O95835 1130 aa12.43□□□□□ -0.42
HDAC7-226ENST00000547259 KLKB1P03952 638 aa12.43□□□□□ -0.42
HDAC7-226ENST00000547259 KRT1P04264 644 aa12.43□□□□□ -0.42
HDAC7-226ENST00000547259 BCKDHBP21953 392 aa12.43□□□□□ -0.42
HDAC7-226ENST00000547259 ADRA1BP35368 520 aa12.43□□□□□ -0.42
HDAC7-226ENST00000547259 GGCXP38435 758 aa12.43□□□□□ -0.42
HDAC7-226ENST00000547259 KIR2DL1P43626 348 aaPredicted RBP12.43□□□□□ -0.42
HDAC7-226ENST00000547259 DNA2P51530 1060 aa12.43□□□□□ -0.42
HDAC7-226ENST00000547259 SCAPQ12770 1279 aa12.43□□□□□ -0.42
HDAC7-226ENST00000547259 KRT81Q14533 505 aa12.43□□□□□ -0.42
HDAC7-226ENST00000547259 BOLA3Q53S33 107 aa12.43□□□□□ -0.42
HDAC7-226ENST00000547259 KCNT1Q5JUK3 1230 aa12.43□□□□□ -0.42
HDAC7-226ENST00000547259 LY6G5CQ5SRR4 150 aa12.43□□□□□ -0.42
HDAC7-226ENST00000547259 ERMARDQ5T6L9 678 aa12.43□□□□□ -0.42
HDAC7-226ENST00000547259 RAP1GAP2Q684P5 730 aa12.43□□□□□ -0.42
HDAC7-226ENST00000547259 TXNRD3NBQ6F5E7 133 aa12.43□□□□□ -0.42
HDAC7-226ENST00000547259 Q6ZNB5 142 aa12.43□□□□□ -0.42
HDAC7-226ENST00000547259 CYP4V2Q6ZWL3 525 aaPredicted RBP12.43□□□□□ -0.42
HDAC7-226ENST00000547259 HTR3DQ70Z44 454 aa12.43□□□□□ -0.42
HDAC7-226ENST00000547259 POLNQ7Z5Q5 900 aa12.43□□□□□ -0.42
HDAC7-226ENST00000547259 CHSY1Q86X52 802 aa12.43□□□□□ -0.42
HDAC7-226ENST00000547259 UBL4BQ8N7F7 174 aa12.43□□□□□ -0.42
HDAC7-226ENST00000547259 TEKT4Q8WW24 435 aa12.43□□□□□ -0.42
HDAC7-226ENST00000547259 HMGB4Q8WW32 186 aa12.43□□□□□ -0.42
HDAC7-226ENST00000547259 XPO6Q96QU8 1125 aaKnown RBP12.43□□□□□ -0.42
HDAC7-226ENST00000547259 DDX50Q9BQ39 737 aaKnown RBP12.43□□□□□ -0.42
HDAC7-226ENST00000547259 SIK2Q9H0K1 926 aa12.43□□□□□ -0.42
HDAC7-226ENST00000547259 DHX35Q9H5Z1 703 aaKnown RBP12.43□□□□□ -0.42
HDAC7-226ENST00000547259 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.43□□□□□ -0.42
HDAC7-226ENST00000547259 KLHL11Q9NVR0 708 aa12.43□□□□□ -0.42
HDAC7-226ENST00000547259 DDX56Q9NY93 547 aaKnown RBP12.43□□□□□ -0.42
HDAC7-226ENST00000547259 XPO7Q9UIA9 1087 aaKnown RBP12.43□□□□□ -0.42
HDAC7-226ENST00000547259 AGO1Q9UL18 857 aaKnown RBP12.43□□□□□ -0.42
HDAC7-226ENST00000547259 SLC6A14Q9UN76 642 aa12.43□□□□□ -0.42
HDAC7-226ENST00000547259 STARD13Q9Y3M8 1113 aa12.43□□□□□ -0.42
HDAC7-226ENST00000547259 TNRC6BQ9UPQ9 1833 aaKnown RBP12.43□□□□□ -0.42
HDAC7-226ENST00000547259 ZZEF1O43149 2961 aa12.43□□□□□ -0.42
HDAC7-226ENST00000547259 PKD1L2Q7Z442 2459 aa12.43□□□□□ -0.42
HDAC7-226ENST00000547259 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.42□□□□□ -0.42
HDAC7-226ENST00000547259 TCRBV21S2A2A0A5A6 115 aa12.42□□□□□ -0.42
HDAC7-226ENST00000547259 F5H5T6 163 aa12.42□□□□□ -0.42
HDAC7-226ENST00000547259 I6L893 689 aaPredicted RBP12.42□□□□□ -0.42
HDAC7-226ENST00000547259 GREM1O60565 184 aa12.42□□□□□ -0.42
HDAC7-226ENST00000547259 SYPP08247 313 aa12.42□□□□□ -0.42
HDAC7-226ENST00000547259 RARAP10276 462 aa12.42□□□□□ -0.42
HDAC7-226ENST00000547259 TACR2P21452 398 aa12.42□□□□□ -0.42
HDAC7-226ENST00000547259 CTNNA2P26232 953 aa12.42□□□□□ -0.42
HDAC7-226ENST00000547259 NTSR1P30989 418 aa12.42□□□□□ -0.42
HDAC7-226ENST00000547259 CTNNA1P35221 906 aaKnown RBP12.42□□□□□ -0.42
HDAC7-226ENST00000547259 SLC6A11P48066 632 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms