RNA–Protein interactions for RNA: ENST00000546820.5

PTCH1-213, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 864 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-213ENST00000546820 TRIM10Q9UDY6 481 aa14.12□□□□□ -0.15
PTCH1-213ENST00000546820 SLC25A13Q9UJS0 675 aa14.12□□□□□ -0.15
PTCH1-213ENST00000546820 INTS6Q9UL03 887 aaKnown RBP14.12□□□□□ -0.15
PTCH1-213ENST00000546820 DOCK4Q8N1I0 1966 aa14.11□□□□□ -0.15
PTCH1-213ENST00000546820 A0A0U1RQJ8 604 aa14.11□□□□□ -0.15
PTCH1-213ENST00000546820 LRRD1A4D1F6 860 aa14.11□□□□□ -0.15
PTCH1-213ENST00000546820 GRID2IPA4D2P6 1211 aa14.11□□□□□ -0.15
PTCH1-213ENST00000546820 MIF4GDA9UHW6 222 aaKnown RBP14.11□□□□□ -0.15
PTCH1-213ENST00000546820 LAMTOR5O43504 91 aa14.11□□□□□ -0.15
PTCH1-213ENST00000546820 TRIOO75962 3097 aa14.11□□□□□ -0.15
PTCH1-213ENST00000546820 KLF8O95600 359 aaPredicted RBP14.11□□□□□ -0.15
PTCH1-213ENST00000546820 KRT1P04264 644 aa14.11□□□□□ -0.15
PTCH1-213ENST00000546820 ARSEP51690 589 aa14.11□□□□□ -0.15
PTCH1-213ENST00000546820 MTAPQ13126 283 aa14.11□□□□□ -0.15
PTCH1-213ENST00000546820 DPYSQ14117 519 aa14.11□□□□□ -0.15
PTCH1-213ENST00000546820 DPYSL3Q14195 570 aa14.11□□□□□ -0.15
PTCH1-213ENST00000546820 PARP15Q460N3 678 aa14.11□□□□□ -0.15
PTCH1-213ENST00000546820 FNDC3BQ53EP0 1204 aaKnown RBP14.11□□□□□ -0.15
PTCH1-213ENST00000546820 ANKRD20A8PQ5CZ79 823 aa14.11□□□□□ -0.15
PTCH1-213ENST00000546820 EGFLAMQ63HQ2 1017 aa14.11□□□□□ -0.15
PTCH1-213ENST00000546820 RETSATQ6NUM9 610 aa14.11□□□□□ -0.15
PTCH1-213ENST00000546820 TMCO3Q6UWJ1 677 aa14.11□□□□□ -0.15
PTCH1-213ENST00000546820 SYT13Q7L8C5 426 aa14.11□□□□□ -0.15
PTCH1-213ENST00000546820 ZNF354CQ86Y25 554 aa14.11□□□□□ -0.15
PTCH1-213ENST00000546820 CCDC33Q8N5R6 958 aa14.11□□□□□ -0.15
PTCH1-213ENST00000546820 ALLCQ8N6M5 410 aa14.11□□□□□ -0.15
PTCH1-213ENST00000546820 UBL4BQ8N7F7 174 aa14.11□□□□□ -0.15
PTCH1-213ENST00000546820 LRRC57Q8N9N7 239 aa14.11□□□□□ -0.15
PTCH1-213ENST00000546820 IL17RCQ8NAC3 791 aa14.11□□□□□ -0.15
PTCH1-213ENST00000546820 TXNDC5Q8NBS9 432 aaKnown RBP14.11□□□□□ -0.15
PTCH1-213ENST00000546820 ATRIPQ8WXE1 791 aa14.11□□□□□ -0.15
PTCH1-213ENST00000546820 TSC1Q92574 1164 aa14.11□□□□□ -0.15
PTCH1-213ENST00000546820 ALG14Q96F25 216 aa14.11□□□□□ -0.15
PTCH1-213ENST00000546820 RBM41Q96IZ5 413 aaKnown RBP14.11□□□□□ -0.15
PTCH1-213ENST00000546820 KCNF1Q9H3M0 494 aa14.11□□□□□ -0.15
PTCH1-213ENST00000546820 ATP13A1Q9HD20 1204 aa14.11□□□□□ -0.15
PTCH1-213ENST00000546820 SUN2Q9UH99 717 aa14.11□□□□□ -0.15
PTCH1-213ENST00000546820 MMP17Q9ULZ9 603 aa14.11□□□□□ -0.15
PTCH1-213ENST00000546820 NEU3Q9UQ49 428 aa14.11□□□□□ -0.15
PTCH1-213ENST00000546820 ERVW-1Q9UQF0 538 aa14.11□□□□□ -0.15
PTCH1-213ENST00000546820 PCDHA3Q9Y5H8 950 aa14.11□□□□□ -0.15
PTCH1-213ENST00000546820 OR51B4Q9Y5P0 310 aa14.11□□□□□ -0.15
PTCH1-213ENST00000546820 KIAA1549LQ6ZVL6 1849 aa14.11□□□□□ -0.15
PTCH1-213ENST00000546820 COL4A3Q01955 1670 aa14.1□□□□□ -0.15
PTCH1-213ENST00000546820 A0A0D9SEW6 157 aa14.1□□□□□ -0.15
PTCH1-213ENST00000546820 CXorf51AA0A1B0GTR3 108 aa14.1□□□□□ -0.15
PTCH1-213ENST00000546820 ZSCAN5CA6NGD5 496 aaPredicted RBP14.1□□□□□ -0.15
PTCH1-213ENST00000546820 ARHGAP42A6NI28 874 aa14.1□□□□□ -0.15
PTCH1-213ENST00000546820 ZNF487B1APH4 448 aa14.1□□□□□ -0.15
PTCH1-213ENST00000546820 CBX4O00257 560 aa14.1□□□□□ -0.15
PTCH1-213ENST00000546820 SYNCRIPO60506 623 aaKnown RBP14.1□□□□□ -0.15
PTCH1-213ENST00000546820 ZFXP17010 805 aaPredicted RBP14.1□□□□□ -0.15
PTCH1-213ENST00000546820 AMPD1P23109 780 aa14.1□□□□□ -0.15
PTCH1-213ENST00000546820 IL4RP24394 825 aa14.1□□□□□ -0.15
PTCH1-213ENST00000546820 SERPINB6P35237 376 aa14.1□□□□□ -0.15
PTCH1-213ENST00000546820 VASPP50552 380 aaPredicted RBP14.1□□□□□ -0.15
PTCH1-213ENST00000546820 GEMIN4P57678 1058 aaKnown RBP14.1□□□□□ -0.15
PTCH1-213ENST00000546820 ZNF234Q14588 700 aa14.1□□□□□ -0.15
PTCH1-213ENST00000546820 SERPINA13PQ6UXR4 307 aa14.1□□□□□ -0.15
PTCH1-213ENST00000546820 Q6ZS52 159 aa14.1□□□□□ -0.15
PTCH1-213ENST00000546820 NT5DC3Q86UY8 548 aa14.1□□□□□ -0.15
PTCH1-213ENST00000546820 C1orf210Q8IVY1 113 aa14.1□□□□□ -0.15
PTCH1-213ENST00000546820 KATNAL2Q8IYT4 538 aa14.1□□□□□ -0.15
PTCH1-213ENST00000546820 DCAF4L2Q8NA75 395 aa14.1□□□□□ -0.15
PTCH1-213ENST00000546820 TRIM58Q8NG06 486 aa14.1□□□□□ -0.15
PTCH1-213ENST00000546820 OR7D4Q8NG98 312 aa14.1□□□□□ -0.15
PTCH1-213ENST00000546820 OR52K2Q8NGK3 314 aa14.1□□□□□ -0.15
PTCH1-213ENST00000546820 EXD1Q8NHP7 514 aa14.1□□□□□ -0.15
PTCH1-213ENST00000546820 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.1□□□□□ -0.15
PTCH1-213ENST00000546820 CYB5D2Q8WUJ1 264 aa14.1□□□□□ -0.15
PTCH1-213ENST00000546820 SORCS1Q8WY21 1168 aa14.1□□□□□ -0.15
PTCH1-213ENST00000546820 RAPGEF5Q92565 580 aa14.1□□□□□ -0.15
PTCH1-213ENST00000546820 ARHGEF2Q92974 986 aaKnown RBP14.1□□□□□ -0.15
PTCH1-213ENST00000546820 RNF25Q96BH1 459 aaPredicted RBP14.1□□□□□ -0.15
PTCH1-213ENST00000546820 PRRX2Q99811 253 aa14.1□□□□□ -0.15
PTCH1-213ENST00000546820 GOLPH3Q9H4A6 298 aa14.1□□□□□ -0.15
PTCH1-213ENST00000546820 POLMQ9NP87 494 aaPredicted RBP14.1□□□□□ -0.15
PTCH1-213ENST00000546820 NDFIP2Q9NV92 336 aa14.1□□□□□ -0.15
PTCH1-213ENST00000546820 STON1Q9Y6Q2 735 aa14.1□□□□□ -0.15
PTCH1-213ENST00000546820 RASA4BC9J798 803 aa14.09□□□□□ -0.15
PTCH1-213ENST00000546820 RASA4O43374 803 aa14.09□□□□□ -0.15
PTCH1-213ENST00000546820 KDELR3O43731 214 aa14.09□□□□□ -0.15
PTCH1-213ENST00000546820 ALDH1A2O94788 518 aa14.09□□□□□ -0.15
PTCH1-213ENST00000546820 CD48P09326 243 aa14.09□□□□□ -0.15
PTCH1-213ENST00000546820 MSNP26038 577 aaKnown RBP14.09□□□□□ -0.15
PTCH1-213ENST00000546820 CTNNA2P26232 953 aa14.09□□□□□ -0.15
PTCH1-213ENST00000546820 CTNNA1P35221 906 aaKnown RBP14.09□□□□□ -0.15
PTCH1-213ENST00000546820 DGKEP52429 567 aa14.09□□□□□ -0.15
PTCH1-213ENST00000546820 RWDD2BP57060 319 aa14.09□□□□□ -0.15
PTCH1-213ENST00000546820 COPS2P61201 443 aa14.09□□□□□ -0.15
PTCH1-213ENST00000546820 MMRN1Q13201 1228 aa14.09□□□□□ -0.15
PTCH1-213ENST00000546820 GAS6Q14393 721 aa14.09□□□□□ -0.15
PTCH1-213ENST00000546820 STARD3Q14849 445 aa14.09□□□□□ -0.15
PTCH1-213ENST00000546820 METTL3Q86U44 580 aaKnown RBP14.09□□□□□ -0.15
PTCH1-213ENST00000546820 LRRC49Q8IUZ0 686 aa14.09□□□□□ -0.15
PTCH1-213ENST00000546820 CAMKK1Q8N5S9 505 aa14.09□□□□□ -0.15
PTCH1-213ENST00000546820 RNF157Q96PX1 679 aa14.09□□□□□ -0.15
PTCH1-213ENST00000546820 ACE2Q9BYF1 805 aaPredicted RBP14.09□□□□□ -0.15
PTCH1-213ENST00000546820 KLHL11Q9NVR0 708 aa14.09□□□□□ -0.15
PTCH1-213ENST00000546820 CACNA2D2Q9NY47 1150 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms