RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 DDIT4Q9NX09 232 aa6.58□□□□□ -1.36
PRKDC-211ENST00000546304 OBP2AQ9NY56 170 aa6.58□□□□□ -1.36
PRKDC-211ENST00000546304 RRN3Q9NYV6 651 aa6.58□□□□□ -1.36
PRKDC-211ENST00000546304 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.58□□□□□ -1.36
PRKDC-211ENST00000546304 CFAP97Q9P2B7 532 aa6.58□□□□□ -1.36
PRKDC-211ENST00000546304 TMEM59LQ9UK28 342 aa6.58□□□□□ -1.36
PRKDC-211ENST00000546304 AP4E1Q9UPM8 1137 aa6.58□□□□□ -1.36
PRKDC-211ENST00000546304 HBS1LQ9Y450 684 aaKnown RBP6.58□□□□□ -1.36
PRKDC-211ENST00000546304 TECTAO75443 2155 aa6.58□□□□□ -1.36
PRKDC-211ENST00000546304 SYNJ2BP-COX16A0A087WUM0 186 aa6.57□□□□□ -1.36
PRKDC-211ENST00000546304 SLC12A8A0AV02 714 aa6.57□□□□□ -1.36
PRKDC-211ENST00000546304 SIGLEC16A6NMB1 481 aa6.57□□□□□ -1.36
PRKDC-211ENST00000546304 EIF3CLB5ME19 914 aaKnown RBP6.57□□□□□ -1.36
PRKDC-211ENST00000546304 LEFTY2O00292 366 aa6.57□□□□□ -1.36
PRKDC-211ENST00000546304 SCAMP3O14828 347 aaKnown RBP6.57□□□□□ -1.36
PRKDC-211ENST00000546304 TMPRSS2O15393 492 aa6.57□□□□□ -1.36
PRKDC-211ENST00000546304 ARHGAP6O43182 974 aa6.57□□□□□ -1.36
PRKDC-211ENST00000546304 CCP110O43303 1012 aa6.57□□□□□ -1.36
PRKDC-211ENST00000546304 STC2O76061 302 aa6.57□□□□□ -1.36
PRKDC-211ENST00000546304 LCA5LO95447 670 aa6.57□□□□□ -1.36
PRKDC-211ENST00000546304 TRUB2O95900 331 aaKnown RBP6.57□□□□□ -1.36
PRKDC-211ENST00000546304 IGLV3-27P01718 113 aa6.57□□□□□ -1.36
PRKDC-211ENST00000546304 APOEP02649 317 aa6.57□□□□□ -1.36
PRKDC-211ENST00000546304 F13BP05160 661 aa6.57□□□□□ -1.36
PRKDC-211ENST00000546304 CYP1A2P05177 515 aa6.57□□□□□ -1.36
PRKDC-211ENST00000546304 ASGR2P07307 311 aa6.57□□□□□ -1.36
PRKDC-211ENST00000546304 HMBSP08397 361 aa6.57□□□□□ -1.36
PRKDC-211ENST00000546304 H2AFZP0C0S5 128 aa6.57□□□□□ -1.36
PRKDC-211ENST00000546304 TMEM253P0C7T8 217 aa6.57□□□□□ -1.36
PRKDC-211ENST00000546304 DESP17661 470 aa6.57□□□□□ -1.36
PRKDC-211ENST00000546304 PSMC3P17980 439 aa6.57□□□□□ -1.36
PRKDC-211ENST00000546304 TFE3P19532 575 aaPredicted RBP6.57□□□□□ -1.36
PRKDC-211ENST00000546304 GPD1P21695 349 aa6.57□□□□□ -1.36
PRKDC-211ENST00000546304 NME2P22392 152 aa6.57□□□□□ -1.36
PRKDC-211ENST00000546304 ARNTP27540 789 aa6.57□□□□□ -1.36
PRKDC-211ENST00000546304 CORO1AP31146 461 aaKnown RBP6.57□□□□□ -1.36
PRKDC-211ENST00000546304 RDXP35241 583 aaKnown RBP6.57□□□□□ -1.36
PRKDC-211ENST00000546304 RFC1P35251 1148 aaPredicted RBP6.57□□□□□ -1.36
PRKDC-211ENST00000546304 PTPN9P43378 593 aa6.57□□□□□ -1.36
PRKDC-211ENST00000546304 KPNA1P52294 538 aaPredicted RBP6.57□□□□□ -1.36
PRKDC-211ENST00000546304 GALCP54803 685 aa6.57□□□□□ -1.36
PRKDC-211ENST00000546304 TBX4P57082 545 aa6.57□□□□□ -1.36
PRKDC-211ENST00000546304 RPL7AP62424 266 aaKnown RBP6.57□□□□□ -1.36
PRKDC-211ENST00000546304 COG7P83436 770 aa6.57□□□□□ -1.36
PRKDC-211ENST00000546304 CCZ1BP86790 482 aa6.57□□□□□ -1.36
PRKDC-211ENST00000546304 CCZ1P86791 482 aaPredicted RBP6.57□□□□□ -1.36
PRKDC-211ENST00000546304 FCHO2Q0JRZ9 810 aa6.57□□□□□ -1.36
PRKDC-211ENST00000546304 CCDC173Q0VFZ6 552 aa6.57□□□□□ -1.36
PRKDC-211ENST00000546304 CDO1Q16878 200 aa6.57□□□□□ -1.36
PRKDC-211ENST00000546304 SLC25A52Q3SY17 297 aa6.57□□□□□ -1.36
PRKDC-211ENST00000546304 C10orf76Q5T2E6 689 aa6.57□□□□□ -1.36
PRKDC-211ENST00000546304 NUGGCQ68CJ6 796 aa6.57□□□□□ -1.36
PRKDC-211ENST00000546304 TANGO2Q6ICL3 276 aa6.57□□□□□ -1.36
PRKDC-211ENST00000546304 H2AFVQ71UI9 128 aa6.57□□□□□ -1.36
PRKDC-211ENST00000546304 SULF2Q8IWU5 870 aa6.57□□□□□ -1.36
PRKDC-211ENST00000546304 ACRBPQ8NEB7 543 aa6.57□□□□□ -1.36
PRKDC-211ENST00000546304 ZNF564Q8TBZ8 553 aaPredicted RBP6.57□□□□□ -1.36
PRKDC-211ENST00000546304 BPIFB1Q8TDL5 484 aa6.57□□□□□ -1.36
PRKDC-211ENST00000546304 FNIP1Q8TF40 1166 aa6.57□□□□□ -1.36
PRKDC-211ENST00000546304 RXFP2Q8WXD0 754 aa6.57□□□□□ -1.36
PRKDC-211ENST00000546304 RSAD2Q8WXG1 361 aa6.57□□□□□ -1.36
PRKDC-211ENST00000546304 RFFLQ8WZ73 363 aa6.57□□□□□ -1.36
PRKDC-211ENST00000546304 GATA6Q92908 595 aa6.57□□□□□ -1.36
PRKDC-211ENST00000546304 NT5C3BQ969T7 300 aa6.57□□□□□ -1.36
PRKDC-211ENST00000546304 WDR89Q96FK6 387 aaPredicted RBP6.57□□□□□ -1.36
PRKDC-211ENST00000546304 ASIC4Q96FT7 647 aa6.57□□□□□ -1.36
PRKDC-211ENST00000546304 CFAP57Q96MR6 1250 aa6.57□□□□□ -1.36
PRKDC-211ENST00000546304 LRRC3BQ96PB8 259 aa6.57□□□□□ -1.36
PRKDC-211ENST00000546304 UHRF1Q96T88 793 aaPredicted RBP6.57□□□□□ -1.36
PRKDC-211ENST00000546304 TBCBQ99426 244 aa6.57□□□□□ -1.36
PRKDC-211ENST00000546304 NPY6RQ99463 290 aa6.57□□□□□ -1.36
PRKDC-211ENST00000546304 EIF3CQ99613 913 aaKnown RBP6.57□□□□□ -1.36
PRKDC-211ENST00000546304 DESI2Q9BSY9 194 aa6.57□□□□□ -1.36
PRKDC-211ENST00000546304 DDX23Q9BUQ8 820 aaKnown RBP6.57□□□□□ -1.36
PRKDC-211ENST00000546304 NUP85Q9BW27 656 aa6.57□□□□□ -1.36
PRKDC-211ENST00000546304 TRIM7Q9C029 511 aa6.57□□□□□ -1.36
PRKDC-211ENST00000546304 CEP44Q9C0F1 390 aa6.57□□□□□ -1.36
PRKDC-211ENST00000546304 KCNK12Q9HB15 430 aa6.57□□□□□ -1.36
PRKDC-211ENST00000546304 MRPL47Q9HD33 250 aaKnown RBP6.57□□□□□ -1.36
PRKDC-211ENST00000546304 PIGVQ9NUD9 493 aa6.57□□□□□ -1.36
PRKDC-211ENST00000546304 CRIM1Q9NZV1 1036 aa6.57□□□□□ -1.36
PRKDC-211ENST00000546304 COX16Q9P0S2 106 aa6.57□□□□□ -1.36
PRKDC-211ENST00000546304 IGSF9Q9P2J2 1179 aa6.57□□□□□ -1.36
PRKDC-211ENST00000546304 UVRAGQ9P2Y5 699 aa6.57□□□□□ -1.36
PRKDC-211ENST00000546304 MYO1AQ9UBC5 1043 aa6.57□□□□□ -1.36
PRKDC-211ENST00000546304 SFMBT1Q9UHJ3 866 aa6.57□□□□□ -1.36
PRKDC-211ENST00000546304 ANAPC7Q9UJX3 599 aa6.57□□□□□ -1.36
PRKDC-211ENST00000546304 LSM7Q9UK45 103 aaKnown RBP6.57□□□□□ -1.36
PRKDC-211ENST00000546304 INTUQ9ULD6 942 aa6.57□□□□□ -1.36
PRKDC-211ENST00000546304 TLR6Q9Y2C9 796 aa6.57□□□□□ -1.36
PRKDC-211ENST00000546304 REXO2Q9Y3B8 237 aaKnown RBP6.57□□□□□ -1.36
PRKDC-211ENST00000546304 SH3BP1Q9Y3L3 701 aa6.57□□□□□ -1.36
PRKDC-211ENST00000546304 EPN1Q9Y6I3 576 aaPredicted RBP6.57□□□□□ -1.36
PRKDC-211ENST00000546304 E2F8A0AVK6 867 aa6.56□□□□□ -1.36
PRKDC-211ENST00000546304 M0QYT0 321 aa6.56□□□□□ -1.36
PRKDC-211ENST00000546304 GREM1O60565 184 aa6.56□□□□□ -1.36
PRKDC-211ENST00000546304 LATS1O95835 1130 aa6.56□□□□□ -1.36
PRKDC-211ENST00000546304 MOCS2O96007 188 aaPredicted RBP6.56□□□□□ -1.36
PRKDC-211ENST00000546304 PDGFRAP16234 1089 aa6.56□□□□□ -1.36
PRKDC-211ENST00000546304 SPINK2P20155 84 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms