RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 PDE5AO76074 875 aa8.77□□□□□ -1.01
CLIP1-218ENST00000545889 MLNP12872 115 aa8.77□□□□□ -1.01
CLIP1-218ENST00000545889 GTF2E2P29084 291 aaKnown RBP8.77□□□□□ -1.01
CLIP1-218ENST00000545889 STIP1P31948 543 aaKnown RBP8.77□□□□□ -1.01
CLIP1-218ENST00000545889 TM4SF4P48230 202 aa8.77□□□□□ -1.01
CLIP1-218ENST00000545889 FAM83EQ2M2I3 478 aa8.77□□□□□ -1.01
CLIP1-218ENST00000545889 POM121L1PQ3SYA9 428 aa8.77□□□□□ -1.01
CLIP1-218ENST00000545889 GPR158Q5T848 1215 aa8.77□□□□□ -1.01
CLIP1-218ENST00000545889 TMEM139Q8IV31 216 aa8.77□□□□□ -1.01
CLIP1-218ENST00000545889 LRRC34Q8IZ02 419 aa8.77□□□□□ -1.01
CLIP1-218ENST00000545889 APBB2Q92870 758 aa8.77□□□□□ -1.01
CLIP1-218ENST00000545889 CELF6Q96J87 481 aaKnown RBP8.77□□□□□ -1.01
CLIP1-218ENST00000545889 APOL2Q9BQE5 337 aa8.77□□□□□ -1.01
CLIP1-218ENST00000545889 C16orf70Q9BSU1 422 aa8.77□□□□□ -1.01
CLIP1-218ENST00000545889 ING2Q9H160 280 aa8.77□□□□□ -1.01
CLIP1-218ENST00000545889 UNC93B1Q9H1C4 597 aa8.77□□□□□ -1.01
CLIP1-218ENST00000545889 RBM12Q9NTZ6 932 aaKnown RBP8.77□□□□□ -1.01
CLIP1-218ENST00000545889 DDX18Q9NVP1 670 aaKnown RBP8.77□□□□□ -1.01
CLIP1-218ENST00000545889 UBA2Q9UBT2 640 aaPredicted RBP8.77□□□□□ -1.01
CLIP1-218ENST00000545889 QSER1Q2KHR3 1735 aa8.77□□□□□ -1.01
CLIP1-218ENST00000545889 FER1L6Q2WGJ9 1857 aa8.77□□□□□ -1.01
CLIP1-218ENST00000545889 A0A1W2PQJ5 194 aa8.77□□□□□ -1.01
CLIP1-218ENST00000545889 SPAG7O75391 227 aa8.77□□□□□ -1.01
CLIP1-218ENST00000545889 BMP10O95393 424 aa8.77□□□□□ -1.01
CLIP1-218ENST00000545889 LTFP02788 710 aa8.77□□□□□ -1.01
CLIP1-218ENST00000545889 ZNF865P0CJ78 1059 aaPredicted RBP8.77□□□□□ -1.01
CLIP1-218ENST00000545889 PRIM2P49643 509 aa8.77□□□□□ -1.01
CLIP1-218ENST00000545889 HDAC4P56524 1084 aa8.77□□□□□ -1.01
CLIP1-218ENST00000545889 PKN2Q16513 984 aaKnown RBP8.77□□□□□ -1.01
CLIP1-218ENST00000545889 ARMC12Q5T9G4 340 aa8.77□□□□□ -1.01
CLIP1-218ENST00000545889 DCLRE1AQ6PJP8 1040 aa8.77□□□□□ -1.01
CLIP1-218ENST00000545889 MAMDC4Q6UXC1 1216 aa8.77□□□□□ -1.01
CLIP1-218ENST00000545889 DNAJC14Q6Y2X3 702 aaPredicted RBP8.77□□□□□ -1.01
CLIP1-218ENST00000545889 TSHZ1Q6ZSZ6 1077 aa8.77□□□□□ -1.01
CLIP1-218ENST00000545889 CPA6Q8N4T0 437 aa8.77□□□□□ -1.01
CLIP1-218ENST00000545889 EXD1Q8NHP7 514 aa8.77□□□□□ -1.01
CLIP1-218ENST00000545889 GLMNQ92990 594 aa8.77□□□□□ -1.01
CLIP1-218ENST00000545889 SGF29Q96ES7 293 aa8.77□□□□□ -1.01
CLIP1-218ENST00000545889 XAB2Q9HCS7 855 aaKnown RBP8.77□□□□□ -1.01
CLIP1-218ENST00000545889 FAM105AQ9NUU6 356 aa8.77□□□□□ -1.01
CLIP1-218ENST00000545889 MYH7BA7E2Y1 1941 aa8.76□□□□□ -1.01
CLIP1-218ENST00000545889 GTPBP10A4D1E9 387 aaKnown RBP8.76□□□□□ -1.01
CLIP1-218ENST00000545889 TRIM43BA6NCK2 446 aa8.76□□□□□ -1.01
CLIP1-218ENST00000545889 ATG7O95352 703 aa8.76□□□□□ -1.01
CLIP1-218ENST00000545889 HLA-DPA1P20036 260 aa8.76□□□□□ -1.01
CLIP1-218ENST00000545889 HOXD13P35453 343 aa8.76□□□□□ -1.01
CLIP1-218ENST00000545889 SERPINB9P50453 376 aa8.76□□□□□ -1.01
CLIP1-218ENST00000545889 SNRPD1P62314 119 aaKnown RBP8.76□□□□□ -1.01
CLIP1-218ENST00000545889 PURAQ00577 322 aaKnown RBP8.76□□□□□ -1.01
CLIP1-218ENST00000545889 GPM6BQ13491 265 aa8.76□□□□□ -1.01
CLIP1-218ENST00000545889 MYBPC3Q14896 1274 aa8.76□□□□□ -1.01
CLIP1-218ENST00000545889 GRAMD1BQ3KR37 738 aa8.76□□□□□ -1.01
CLIP1-218ENST00000545889 MORN1Q5T089 497 aa8.76□□□□□ -1.01
CLIP1-218ENST00000545889 OTOAQ7RTW8 1153 aa8.76□□□□□ -1.01
CLIP1-218ENST00000545889 SLC9A9Q8IVB4 645 aa8.76□□□□□ -1.01
CLIP1-218ENST00000545889 TMEM192Q8IY95 271 aa8.76□□□□□ -1.01
CLIP1-218ENST00000545889 STX19Q8N4C7 294 aa8.76□□□□□ -1.01
CLIP1-218ENST00000545889 FAM71DQ8N9W8 422 aa8.76□□□□□ -1.01
CLIP1-218ENST00000545889 C12orf50Q8NA57 414 aaPredicted RBP8.76□□□□□ -1.01
CLIP1-218ENST00000545889 MCRS1Q96EZ8 462 aa8.76□□□□□ -1.01
CLIP1-218ENST00000545889 RBM15Q96T37 977 aaKnown RBP eCLIP8.76□□□□□ -1.01
CLIP1-218ENST00000545889 VANGL2Q9ULK5 521 aa8.76□□□□□ -1.01
CLIP1-218ENST00000545889 GIT1Q9Y2X7 761 aa8.76□□□□□ -1.01
CLIP1-218ENST00000545889 RGPD3A6NKT7 1758 aaPredicted RBP8.76□□□□□ -1.01
CLIP1-218ENST00000545889 RGPD4Q7Z3J3 1758 aa8.76□□□□□ -1.01
CLIP1-218ENST00000545889 CYP11B1P15538 503 aa8.76□□□□□ -1.01
CLIP1-218ENST00000545889 KELP23276 732 aa8.76□□□□□ -1.01
CLIP1-218ENST00000545889 CLCN2P51788 898 aa8.76□□□□□ -1.01
CLIP1-218ENST00000545889 STAT4Q14765 748 aa8.76□□□□□ -1.01
CLIP1-218ENST00000545889 KCTD19Q17RG1 926 aaPredicted RBP8.76□□□□□ -1.01
CLIP1-218ENST00000545889 SPRED3Q2MJR0 410 aa8.76□□□□□ -1.01
CLIP1-218ENST00000545889 TJAP1Q5JTD0 557 aa8.76□□□□□ -1.01
CLIP1-218ENST00000545889 KCNT1Q5JUK3 1230 aa8.76□□□□□ -1.01
CLIP1-218ENST00000545889 FAXCQ5TGI0 409 aa8.76□□□□□ -1.01
CLIP1-218ENST00000545889 GDF6Q6KF10 455 aaPredicted RBP8.76□□□□□ -1.01
CLIP1-218ENST00000545889 EFL1Q7Z2Z2 1120 aaKnown RBP8.76□□□□□ -1.01
CLIP1-218ENST00000545889 EMC1Q8N766 993 aa8.76□□□□□ -1.01
CLIP1-218ENST00000545889 DBF4BQ8NFT6 615 aa8.76□□□□□ -1.01
CLIP1-218ENST00000545889 ADAM32Q8TC27 787 aa8.76□□□□□ -1.01
CLIP1-218ENST00000545889 FAM118BQ9BPY3 351 aa8.76□□□□□ -1.01
CLIP1-218ENST00000545889 CDHR5Q9HBB8 845 aa8.76□□□□□ -1.01
CLIP1-218ENST00000545889 TXLNGQ9NUQ3 528 aa8.76□□□□□ -1.01
CLIP1-218ENST00000545889 DCTN4Q9UJW0 460 aa8.76□□□□□ -1.01
CLIP1-218ENST00000545889 PADI3Q9ULW8 664 aa8.76□□□□□ -1.01
CLIP1-218ENST00000545889 KAT6AQ92794 2004 aa8.76□□□□□ -1.01
CLIP1-218ENST00000545889 A8MX80 341 aa8.76□□□□□ -1.01
CLIP1-218ENST00000545889 LIN7AO14910 233 aaPredicted RBP8.76□□□□□ -1.01
CLIP1-218ENST00000545889 NFATC1O95644 943 aa8.76□□□□□ -1.01
CLIP1-218ENST00000545889 COMTP21964 271 aa8.76□□□□□ -1.01
CLIP1-218ENST00000545889 CXCR2P25025 360 aa8.76□□□□□ -1.01
CLIP1-218ENST00000545889 FDFT1P37268 417 aa8.76□□□□□ -1.01
CLIP1-218ENST00000545889 CCNFP41002 786 aa8.76□□□□□ -1.01
CLIP1-218ENST00000545889 ADARP55265 1226 aaKnown RBP8.76□□□□□ -1.01
CLIP1-218ENST00000545889 MBTD1Q05BQ5 628 aa8.76□□□□□ -1.01
CLIP1-218ENST00000545889 BTKQ06187 659 aa8.76□□□□□ -1.01
CLIP1-218ENST00000545889 TUSC3Q13454 348 aa8.76□□□□□ -1.01
CLIP1-218ENST00000545889 PDK2Q15119 407 aa8.76□□□□□ -1.01
CLIP1-218ENST00000545889 IFNEQ86WN2 208 aa8.76□□□□□ -1.01
CLIP1-218ENST00000545889 CCNJLQ8IV13 435 aa8.76□□□□□ -1.01
CLIP1-218ENST00000545889 CCDC33Q8N5R6 958 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms