RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 GPR27Q9NS67 375 aa15.2■□□□□ 0.02
RTN3-214ENST00000545432 NLGN3Q9NZ94 848 aa15.2■□□□□ 0.02
RTN3-214ENST00000545432 TLR6Q9Y2C9 796 aa15.2■□□□□ 0.02
RTN3-214ENST00000545432 PIEZO2Q9H5I5 2752 aa15.2■□□□□ 0.02
RTN3-214ENST00000545432 TYW5A2RUC4 315 aaKnown RBP15.19■□□□□ 0.02
RTN3-214ENST00000545432 CDRT15L2A8MXV6 281 aa15.19■□□□□ 0.02
RTN3-214ENST00000545432 SCAMP1O15126 338 aa15.19■□□□□ 0.02
RTN3-214ENST00000545432 ALOX15BO15296 676 aa15.19■□□□□ 0.02
RTN3-214ENST00000545432 ATP9BO43861 1147 aa15.19■□□□□ 0.02
RTN3-214ENST00000545432 VAV1P15498 845 aa15.19■□□□□ 0.02
RTN3-214ENST00000545432 RPL13P26373 211 aaKnown RBP15.19■□□□□ 0.02
RTN3-214ENST00000545432 MLLT3P42568 568 aaPredicted RBP15.19■□□□□ 0.02
RTN3-214ENST00000545432 SULT2A1Q06520 285 aa15.19■□□□□ 0.02
RTN3-214ENST00000545432 ADAM9Q13443 819 aa15.19■□□□□ 0.02
RTN3-214ENST00000545432 CUL2Q13617 745 aa15.19■□□□□ 0.02
RTN3-214ENST00000545432 CNGA2Q16280 664 aa15.19■□□□□ 0.02
RTN3-214ENST00000545432 ARL13BQ3SXY8 428 aa15.19■□□□□ 0.02
RTN3-214ENST00000545432 FAM46CQ5VWP2 391 aa15.19■□□□□ 0.02
RTN3-214ENST00000545432 GUF1Q8N442 669 aaKnown RBP15.19■□□□□ 0.02
RTN3-214ENST00000545432 ALG14Q96F25 216 aa15.19■□□□□ 0.02
RTN3-214ENST00000545432 HSFY1Q96LI6 401 aa15.19■□□□□ 0.02
RTN3-214ENST00000545432 APOLD1Q96LR9 279 aa15.19■□□□□ 0.02
RTN3-214ENST00000545432 SERPINB11Q96P15 392 aa15.19■□□□□ 0.02
RTN3-214ENST00000545432 DOCK9Q9BZ29 2069 aa15.19■□□□□ 0.02
RTN3-214ENST00000545432 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.18■□□□□ 0.02
RTN3-214ENST00000545432 MCF2LO15068 1137 aa15.18■□□□□ 0.02
RTN3-214ENST00000545432 FBXO21O94952 628 aa15.18■□□□□ 0.02
RTN3-214ENST00000545432 THEGLP0DJG4 465 aa15.18■□□□□ 0.02
RTN3-214ENST00000545432 MAT2AP31153 395 aaKnown RBP15.18■□□□□ 0.02
RTN3-214ENST00000545432 NNMTP40261 264 aa15.18■□□□□ 0.02
RTN3-214ENST00000545432 STK19P49842 368 aaPredicted RBP15.18■□□□□ 0.02
RTN3-214ENST00000545432 MXI1P50539 228 aa15.18■□□□□ 0.02
RTN3-214ENST00000545432 DUSP3P51452 185 aaPredicted RBP15.18■□□□□ 0.02
RTN3-214ENST00000545432 CNTN1Q12860 1018 aa15.18■□□□□ 0.02
RTN3-214ENST00000545432 CLEC14AQ86T13 490 aa15.18■□□□□ 0.02
RTN3-214ENST00000545432 CCDC117Q8IWD4 279 aaPredicted RBP15.18■□□□□ 0.02
RTN3-214ENST00000545432 CFAP52Q8N1V2 620 aa15.18■□□□□ 0.02
RTN3-214ENST00000545432 FAM174AQ8TBP5 190 aa15.18■□□□□ 0.02
RTN3-214ENST00000545432 DQX1Q8TE96 717 aaKnown RBP15.18■□□□□ 0.02
RTN3-214ENST00000545432 TFAP2BQ92481 460 aa15.18■□□□□ 0.02
RTN3-214ENST00000545432 CCDC97Q96F63 343 aaPredicted RBP15.18■□□□□ 0.02
RTN3-214ENST00000545432 ZSWIM1Q9BR11 485 aa15.18■□□□□ 0.02
RTN3-214ENST00000545432 DUSP23Q9BVJ7 150 aa15.18■□□□□ 0.02
RTN3-214ENST00000545432 MMRN2Q9H8L6 949 aa15.18■□□□□ 0.02
RTN3-214ENST00000545432 UPF2Q9HAU5 1272 aaKnown RBP15.18■□□□□ 0.02
RTN3-214ENST00000545432 IL17BQ9UHF5 180 aa15.18■□□□□ 0.02
RTN3-214ENST00000545432 USP25Q9UHP3 1055 aa15.18■□□□□ 0.02
RTN3-214ENST00000545432 CA5BQ9Y2D0 317 aa15.18■□□□□ 0.02
RTN3-214ENST00000545432 AHCTF1Q8WYP5 2266 aa15.18■□□□□ 0.02
RTN3-214ENST00000545432 PYCARD-AS1I3L0S3 204 aa15.17■□□□□ 0.02
RTN3-214ENST00000545432 TERTO14746 1132 aaKnown RBP15.17■□□□□ 0.02
RTN3-214ENST00000545432 SLC28A2O43868 658 aa15.17■□□□□ 0.02
RTN3-214ENST00000545432 STX10O60499 249 aa15.17■□□□□ 0.02
RTN3-214ENST00000545432 PAEPP09466 180 aa15.17■□□□□ 0.02
RTN3-214ENST00000545432 LCP1P13796 627 aa15.17■□□□□ 0.02
RTN3-214ENST00000545432 EDRF1Q3B7T1 1238 aa15.17■□□□□ 0.02
RTN3-214ENST00000545432 HS1BP3Q53T59 392 aa15.17■□□□□ 0.02
RTN3-214ENST00000545432 RNF219Q5W0B1 726 aaPredicted RBP15.17■□□□□ 0.02
RTN3-214ENST00000545432 ATL3Q6DD88 541 aa15.17■□□□□ 0.02
RTN3-214ENST00000545432 TMC6Q7Z403 805 aa15.17■□□□□ 0.02
RTN3-214ENST00000545432 ABI3BPQ7Z7G0 1075 aa15.17■□□□□ 0.02
RTN3-214ENST00000545432 DSG4Q86SJ6 1040 aa15.17■□□□□ 0.02
RTN3-214ENST00000545432 DCP2Q8IU60 420 aaKnown RBP15.17■□□□□ 0.02
RTN3-214ENST00000545432 EXD3Q8N9H8 876 aa15.17■□□□□ 0.02
RTN3-214ENST00000545432 OR8D1Q8WZ84 308 aa15.17■□□□□ 0.02
RTN3-214ENST00000545432 PRMT1Q99873 361 aaKnown RBP15.17■□□□□ 0.02
RTN3-214ENST00000545432 XPO7Q9UIA9 1087 aaKnown RBP15.17■□□□□ 0.02
RTN3-214ENST00000545432 RCOR1Q9UKL0 485 aa15.17■□□□□ 0.02
RTN3-214ENST00000545432 ENTPD2Q9Y5L3 495 aa15.17■□□□□ 0.02
RTN3-214ENST00000545432 OR51B4Q9Y5P0 310 aa15.17■□□□□ 0.02
RTN3-214ENST00000545432 COL27A1Q8IZC6 1860 aaPredicted RBP15.16■□□□□ 0.02
RTN3-214ENST00000545432 BSNQ9UPA5 3926 aa15.16■□□□□ 0.02
RTN3-214ENST00000545432 NEMP2A6NFY4 417 aa15.16■□□□□ 0.02
RTN3-214ENST00000545432 K7ESM1 405 aa15.16■□□□□ 0.02
RTN3-214ENST00000545432 EFSO43281 561 aa15.16■□□□□ 0.02
RTN3-214ENST00000545432 IGLV3-25P01717 112 aa15.16■□□□□ 0.02
RTN3-214ENST00000545432 ALPPL2P10696 532 aa15.16■□□□□ 0.02
RTN3-214ENST00000545432 OXCT1P55809 520 aa15.16■□□□□ 0.02
RTN3-214ENST00000545432 ZNF284Q2VY69 593 aa15.16■□□□□ 0.02
RTN3-214ENST00000545432 CBWD6Q4V339 395 aa15.16■□□□□ 0.02
RTN3-214ENST00000545432 CBWD3Q5JTY5 395 aa15.16■□□□□ 0.02
RTN3-214ENST00000545432 CBWD5Q5RIA9 395 aa15.16■□□□□ 0.02
RTN3-214ENST00000545432 PIP5KL1Q5T9C9 394 aa15.16■□□□□ 0.02
RTN3-214ENST00000545432 CXorf57Q6NSI4 855 aaKnown RBP15.16■□□□□ 0.02
RTN3-214ENST00000545432 LURAP1LQ8IV03 231 aa15.16■□□□□ 0.02
RTN3-214ENST00000545432 OR13H1Q8NG92 308 aa15.16■□□□□ 0.02
RTN3-214ENST00000545432 TPCN2Q8NHX9 752 aa15.16■□□□□ 0.02
RTN3-214ENST00000545432 CLEC4CQ8WTT0 213 aa15.16■□□□□ 0.02
RTN3-214ENST00000545432 ERCC4Q92889 916 aaPredicted RBP15.16■□□□□ 0.02
RTN3-214ENST00000545432 SATB2Q9UPW6 733 aa15.16■□□□□ 0.02
RTN3-214ENST00000545432 HPSEQ9Y251 543 aa15.16■□□□□ 0.02
RTN3-214ENST00000545432 HS3ST3A1Q9Y663 406 aa15.16■□□□□ 0.02
RTN3-214ENST00000545432 CSNK1G3Q9Y6M4 447 aa15.16■□□□□ 0.02
RTN3-214ENST00000545432 EME2A4GXA9 379 aaPredicted RBP15.15■□□□□ 0.02
RTN3-214ENST00000545432 CD19P15391 556 aa15.15■□□□□ 0.02
RTN3-214ENST00000545432 TACR2P21452 398 aa15.15■□□□□ 0.02
RTN3-214ENST00000545432 TGM2P21980 687 aa15.15■□□□□ 0.02
RTN3-214ENST00000545432 ME1P48163 572 aa15.15■□□□□ 0.02
RTN3-214ENST00000545432 YWHAEP62258 255 aaKnown RBP15.15■□□□□ 0.02
RTN3-214ENST00000545432 CLN3Q13286 438 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms