RNA–Protein interactions for RNA: ENST00000545368.5

CDCA3-210, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 619 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-210ENST00000545368 SPON2Q9BUD6 331 aa13.32□□□□□ -0.28
CDCA3-210ENST00000545368 C2orf49Q9BVC5 232 aaPredicted RBP13.32□□□□□ -0.28
CDCA3-210ENST00000545368 LRRC19Q9H756 370 aa13.32□□□□□ -0.28
CDCA3-210ENST00000545368 ATP13A1Q9HD20 1204 aa13.32□□□□□ -0.28
CDCA3-210ENST00000545368 HPCAL4Q9UM19 191 aa13.32□□□□□ -0.28
CDCA3-210ENST00000545368 MRPS17Q9Y2R5 130 aaKnown RBP13.32□□□□□ -0.28
CDCA3-210ENST00000545368 MFHAS1Q9Y4C4 1052 aa13.32□□□□□ -0.28
CDCA3-210ENST00000545368 HEY1Q9Y5J3 304 aa13.32□□□□□ -0.28
CDCA3-210ENST00000545368 RAD54BQ9Y620 910 aa13.32□□□□□ -0.28
CDCA3-210ENST00000545368 CHD5Q8TDI0 1954 aa13.31□□□□□ -0.28
CDCA3-210ENST00000545368 A0A0D9SEW6 157 aa13.31□□□□□ -0.28
CDCA3-210ENST00000545368 APOC4-APOC2K7ER74 178 aa13.31□□□□□ -0.28
CDCA3-210ENST00000545368 PPP1R12AO14974 1030 aaPredicted RBP13.31□□□□□ -0.28
CDCA3-210ENST00000545368 TRIM24O15164 1050 aa13.31□□□□□ -0.28
CDCA3-210ENST00000545368 NCAM2O15394 837 aa13.31□□□□□ -0.28
CDCA3-210ENST00000545368 APOC2P02655 101 aa13.31□□□□□ -0.28
CDCA3-210ENST00000545368 FGGP02679 453 aa13.31□□□□□ -0.28
CDCA3-210ENST00000545368 POLR2EP19388 210 aaKnown RBP13.31□□□□□ -0.28
CDCA3-210ENST00000545368 DRD1P21728 446 aa13.31□□□□□ -0.28
CDCA3-210ENST00000545368 MZF1P28698 734 aaPredicted RBP13.31□□□□□ -0.28
CDCA3-210ENST00000545368 NR2C2P49116 596 aa13.31□□□□□ -0.28
CDCA3-210ENST00000545368 ZXDAP98168 799 aa13.31□□□□□ -0.28
CDCA3-210ENST00000545368 GBE1Q04446 702 aa13.31□□□□□ -0.28
CDCA3-210ENST00000545368 SULT2A1Q06520 285 aa13.31□□□□□ -0.28
CDCA3-210ENST00000545368 E2F5Q15329 346 aa13.31□□□□□ -0.28
CDCA3-210ENST00000545368 GEN1Q17RS7 908 aa13.31□□□□□ -0.28
CDCA3-210ENST00000545368 LONRF2Q1L5Z9 754 aa13.31□□□□□ -0.28
CDCA3-210ENST00000545368 IER5LQ5T953 404 aa13.31□□□□□ -0.28
CDCA3-210ENST00000545368 AFMIDQ63HM1 303 aa13.31□□□□□ -0.28
CDCA3-210ENST00000545368 MBLAC2Q68D91 279 aa13.31□□□□□ -0.28
CDCA3-210ENST00000545368 NAIF1Q69YI7 327 aaPredicted RBP13.31□□□□□ -0.28
CDCA3-210ENST00000545368 ASTLQ6HA08 431 aaPredicted RBP13.31□□□□□ -0.28
CDCA3-210ENST00000545368 KIAA0907Q7Z7F0 614 aaPredicted RBP13.31□□□□□ -0.28
CDCA3-210ENST00000545368 SLC13A5Q86YT5 568 aaPredicted RBP13.31□□□□□ -0.28
CDCA3-210ENST00000545368 PHTF2Q8N3S3 785 aa13.31□□□□□ -0.28
CDCA3-210ENST00000545368 ATPAF2Q8N5M1 289 aa13.31□□□□□ -0.28
CDCA3-210ENST00000545368 DCAF4L2Q8NA75 395 aa13.31□□□□□ -0.28
CDCA3-210ENST00000545368 TTC13Q8NBP0 860 aa13.31□□□□□ -0.28
CDCA3-210ENST00000545368 OR7D4Q8NG98 312 aa13.31□□□□□ -0.28
CDCA3-210ENST00000545368 OR52K2Q8NGK3 314 aa13.31□□□□□ -0.28
CDCA3-210ENST00000545368 ARHGEF2Q92974 986 aaKnown RBP13.31□□□□□ -0.28
CDCA3-210ENST00000545368 HAUS1Q96CS2 278 aa13.31□□□□□ -0.28
CDCA3-210ENST00000545368 HMCESQ96FZ2 354 aa13.31□□□□□ -0.28
CDCA3-210ENST00000545368 LMLNQ96KR4 655 aa13.31□□□□□ -0.28
CDCA3-210ENST00000545368 FEM1AQ9BSK4 669 aa13.31□□□□□ -0.28
CDCA3-210ENST00000545368 CIPCQ9C0C6 399 aa13.31□□□□□ -0.28
CDCA3-210ENST00000545368 SLC39A8Q9C0K1 460 aa13.31□□□□□ -0.28
CDCA3-210ENST00000545368 KLC2Q9H0B6 622 aa13.31□□□□□ -0.28
CDCA3-210ENST00000545368 NYNRINQ9P2P1 1898 aaKnown RBP13.3□□□□□ -0.28
CDCA3-210ENST00000545368 CBX4O00257 560 aa13.3□□□□□ -0.28
CDCA3-210ENST00000545368 PGRMC1O00264 195 aaKnown RBP13.3□□□□□ -0.28
CDCA3-210ENST00000545368 DCXO43602 365 aa13.3□□□□□ -0.28
CDCA3-210ENST00000545368 TIMM44O43615 452 aa13.3□□□□□ -0.28
CDCA3-210ENST00000545368 ASLP04424 464 aa13.3□□□□□ -0.28
CDCA3-210ENST00000545368 ATP5BP06576 529 aaKnown RBP13.3□□□□□ -0.28
CDCA3-210ENST00000545368 ACVRL1P37023 503 aa13.3□□□□□ -0.28
CDCA3-210ENST00000545368 PAPOLAP51003 745 aaKnown RBP13.3□□□□□ -0.28
CDCA3-210ENST00000545368 ADCY2Q08462 1091 aa13.3□□□□□ -0.28
CDCA3-210ENST00000545368 SIGLEC14Q08ET2 396 aa13.3□□□□□ -0.28
CDCA3-210ENST00000545368 GALNT2Q10471 571 aa13.3□□□□□ -0.28
CDCA3-210ENST00000545368 SERINC3Q13530 473 aa13.3□□□□□ -0.28
CDCA3-210ENST00000545368 PDK1Q15118 436 aa13.3□□□□□ -0.28
CDCA3-210ENST00000545368 TMEM196Q5HYL7 178 aa13.3□□□□□ -0.28
CDCA3-210ENST00000545368 NPNTQ6UXI9 565 aa13.3□□□□□ -0.28
CDCA3-210ENST00000545368 LRRC49Q8IUZ0 686 aa13.3□□□□□ -0.28
CDCA3-210ENST00000545368 ARHGAP12Q8IWW6 846 aa13.3□□□□□ -0.28
CDCA3-210ENST00000545368 APCDD1Q8J025 514 aa13.3□□□□□ -0.28
CDCA3-210ENST00000545368 SIX5Q8N196 739 aa13.3□□□□□ -0.28
CDCA3-210ENST00000545368 RASGEF1CQ8N431 466 aa13.3□□□□□ -0.28
CDCA3-210ENST00000545368 KIF18AQ8NI77 898 aa13.3□□□□□ -0.28
CDCA3-210ENST00000545368 CCDC26Q8TAB7 109 aa13.3□□□□□ -0.28
CDCA3-210ENST00000545368 ACDQ96AP0 544 aa13.3□□□□□ -0.28
CDCA3-210ENST00000545368 HERPUD2Q9BSE4 406 aa13.3□□□□□ -0.28
CDCA3-210ENST00000545368 NOL6Q9H6R4 1146 aaKnown RBP13.3□□□□□ -0.28
CDCA3-210ENST00000545368 SP110Q9HB58 689 aa13.3□□□□□ -0.28
CDCA3-210ENST00000545368 DTLQ9NZJ0 730 aa13.3□□□□□ -0.28
CDCA3-210ENST00000545368 SLC25A13Q9UJS0 675 aa13.3□□□□□ -0.28
CDCA3-210ENST00000545368 OR51B4Q9Y5P0 310 aa13.3□□□□□ -0.28
CDCA3-210ENST00000545368 NUP205Q92621 2012 aa13.29□□□□□ -0.28
CDCA3-210ENST00000545368 KRBA1A5PL33 1030 aa13.29□□□□□ -0.28
CDCA3-210ENST00000545368 ZSCAN5CA6NGD5 496 aaPredicted RBP13.29□□□□□ -0.28
CDCA3-210ENST00000545368 MCF2LO15068 1137 aa13.29□□□□□ -0.28
CDCA3-210ENST00000545368 FANCGO15287 622 aa13.29□□□□□ -0.28
CDCA3-210ENST00000545368 MAP3K6O95382 1288 aa13.29□□□□□ -0.28
CDCA3-210ENST00000545368 ALADP13716 330 aa13.29□□□□□ -0.28
CDCA3-210ENST00000545368 PECAM1P16284 738 aaPredicted RBP13.29□□□□□ -0.28
CDCA3-210ENST00000545368 GARSP41250 739 aaKnown RBP13.29□□□□□ -0.28
CDCA3-210ENST00000545368 PAFAH1B1P43034 410 aa13.29□□□□□ -0.28
CDCA3-210ENST00000545368 TNFRSF4P43489 277 aa13.29□□□□□ -0.28
CDCA3-210ENST00000545368 NUMBP49757 651 aa13.29□□□□□ -0.28
CDCA3-210ENST00000545368 GEMIN4P57678 1058 aaKnown RBP13.29□□□□□ -0.28
CDCA3-210ENST00000545368 STARD6P59095 220 aa13.29□□□□□ -0.28
CDCA3-210ENST00000545368 OTUD4Q01804 1114 aaKnown RBP13.29□□□□□ -0.28
CDCA3-210ENST00000545368 KLF1Q13351 362 aaPredicted RBP13.29□□□□□ -0.28
CDCA3-210ENST00000545368 FBXO43Q4G163 708 aa13.29□□□□□ -0.28
CDCA3-210ENST00000545368 FSTL4Q6MZW2 842 aa13.29□□□□□ -0.28
CDCA3-210ENST00000545368 TIGD7Q6NT04 549 aaPredicted RBP13.29□□□□□ -0.28
CDCA3-210ENST00000545368 RETSATQ6NUM9 610 aa13.29□□□□□ -0.28
CDCA3-210ENST00000545368 ADAT2Q7Z6V5 191 aaKnown RBP13.29□□□□□ -0.28
CDCA3-210ENST00000545368 ADIPOR2Q86V24 386 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms